Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_D03
         (556 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   3.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   3.6  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      22   3.6  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   4.8  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    21   6.3  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   6.3  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   6.3  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    21   8.4  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +1

Query: 157  KSDRPELTSAKNIVSGGRGLKSG 225
            +SDRPEL+ A+  +   + LK G
Sbjct: 1878 RSDRPELSEAECDIDSLKKLKLG 1900


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +1

Query: 157  KSDRPELTSAKNIVSGGRGLKSG 225
            +SDRPEL+ A+  +   + LK G
Sbjct: 1874 RSDRPELSEAECDIDSLKKLKLG 1896


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/26 (30%), Positives = 17/26 (65%)
 Frame = +1

Query: 139 VSQELTKSDRPELTSAKNIVSGGRGL 216
           ++Q+  ++DR EL+  + + +GG  L
Sbjct: 115 LTQQADQTDRDELSHVRALAAGGNHL 140


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 11/41 (26%), Positives = 18/41 (43%)
 Frame = +1

Query: 376 GISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDHGLVADL 498
           G++  +QH +G +     V I       +   +DH  VA L
Sbjct: 176 GVNDVVQHQSGSEAEAEFVCIATPEAIELHFTTDHPSVAYL 216


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +3

Query: 450 RSAYLPGIRSRFGGGFVQGGSRINI 524
           R+  LP +   +GGGF+ G + +++
Sbjct: 154 RNGLLPLLVWIYGGGFMSGTATLDV 178


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +3

Query: 450 RSAYLPGIRSRFGGGFVQGGSRINI 524
           R+  LP +   +GGGF+ G + +++
Sbjct: 154 RNGLLPLLVWIYGGGFMSGTATLDV 178


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = +1

Query: 103 PDGDYKTDLAEFVSQELTKSDRPELTSAKNIVSG 204
           P GDY  D  E+   +    +  ELT+   I  G
Sbjct: 20  PGGDYSLDEIEWDGGDYEVVESRELTNLVEIFDG 53


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +1

Query: 148 ELTKSDRPELTSAKNIVSGGRGLKSGDNFKLL 243
           ELTK D+  L   KNI+     L++ D+ K L
Sbjct: 272 ELTKIDKWFLHKMKNIIDYYLVLENTDHTKQL 303


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.317    0.138    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,035
Number of Sequences: 438
Number of extensions: 2960
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15949830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)