Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_D01
         (488 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC037209-1|AAH37209.1|  792|Homo sapiens zinc finger protein 606...    30   3.7  
AF455357-1|AAL58442.1|  792|Homo sapiens zinc finger protein 328...    30   3.7  
AB058755-1|BAB47481.1|  948|Homo sapiens KIAA1852 protein protein.     30   3.7  

>BC037209-1|AAH37209.1|  792|Homo sapiens zinc finger protein 606
           protein.
          Length = 792

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +1

Query: 130 VFLEKTSKGIKQYNIRPIDPWFISSLDVLADEDMRLLFHFN 252
           +F E+ S G+K       DPWF S L+VL  +D   ++H N
Sbjct: 150 IFEEEQSHGMKLERYIWDDPWF-SRLEVLGCKDQLEMYHMN 189


>AF455357-1|AAL58442.1|  792|Homo sapiens zinc finger protein 328
           protein.
          Length = 792

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +1

Query: 130 VFLEKTSKGIKQYNIRPIDPWFISSLDVLADEDMRLLFHFN 252
           +F E+ S G+K       DPWF S L+VL  +D   ++H N
Sbjct: 150 IFEEEQSHGMKLERYIWDDPWF-SRLEVLGCKDQLEMYHMN 189


>AB058755-1|BAB47481.1|  948|Homo sapiens KIAA1852 protein protein.
          Length = 948

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +1

Query: 130 VFLEKTSKGIKQYNIRPIDPWFISSLDVLADEDMRLLFHFN 252
           +F E+ S G+K       DPWF S L+VL  +D   ++H N
Sbjct: 306 IFEEEQSHGMKLERYIWDDPWF-SRLEVLGCKDQLEMYHMN 345


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,115,067
Number of Sequences: 237096
Number of extensions: 1482213
Number of successful extensions: 3527
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3527
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4366354454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)