Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_C21
         (455 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    45   3e-07
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   3.6  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    21   4.8  
AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.            21   4.8  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   6.3  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   6.3  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   8.4  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           21   8.4  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   8.4  

>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 45.2 bits (102), Expect = 3e-07
 Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 2/139 (1%)
 Frame = +1

Query: 4   ELAVGIAGY--VKHKDLETSIVKHLNETIAQYPTNKDVARTFDIMQTDLQCCGINGPEDW 177
           ++AV +  +  VK+ D   +I +   E    Y  N +     D +Q +LQCCG++   D+
Sbjct: 95  QIAVAVYAFIVVKNDDNFRNISEKYQEIFNGYFLNSESKDFIDFIQKNLQCCGVHSLSDY 154

Query: 178 AAHNLTIPNTCCTGQEINDGVLVACTKDTPGFHTKGCLNELVAHLKDXXXXXXXXXXXXX 357
             ++  IP +CC   E N       T      +T GC+  L   +K              
Sbjct: 155 --NDKPIPASCCNSPENN-------TCSISNSYTNGCVEALKDTVKLAGTVFGSVAIAIA 205

Query: 358 XXXXXXXXFACCLARSIRS 414
                    A CLA SI++
Sbjct: 206 IVELIGIICALCLANSIKN 224


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -3

Query: 351 AEPDSSEHYSDILEVSDQFVQAAFSMETGCVLSAS 247
           AEP   EH+   LE+ ++ V    S + G +   S
Sbjct: 688 AEPLVKEHFKKALELMNRAVSVPQSHQPGAMEQVS 722


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 380 YSPAAWLAPYAVNTKP 427
           YSP +  + Y VNTKP
Sbjct: 268 YSPLSSRSLYYVNTKP 283


>AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.
          Length = 122

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +1

Query: 58  IVKHLNETIAQYPTNKDVAR 117
           ++ H N   A Y  NKD AR
Sbjct: 4   LIPHRNPASANYYENKDGAR 23


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +1

Query: 214 TGQEINDGVLVACTKDTPGFHTKGCLNELVA 306
           T   IN G       ++PG  T GC + L++
Sbjct: 54  TASLINPGNFSPSGPNSPGSFTAGCHSNLLS 84


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +1

Query: 214 TGQEINDGVLVACTKDTPGFHTKGCLNELVA 306
           T   IN G       ++PG  T GC + L++
Sbjct: 54  TASLINPGNFSPSGPNSPGSFTAGCHSNLLS 84


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 260 SLVQATRTPSLISCPVQQVLGMVR 189
           SL +A +  + + CP + V  M+R
Sbjct: 248 SLEKAKQVGAFMGCPTRNVKEMIR 271


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 260 SLVQATRTPSLISCPVQQVLGMVR 189
           SL +A +  + + CP + V  M+R
Sbjct: 119 SLEKAKQVGAFMGCPTRNVKEMIR 142


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 260 SLVQATRTPSLISCPVQQVLGMVR 189
           SL +A +  + + CP + V  M+R
Sbjct: 248 SLEKAKQVGAFMGCPTRNVKEMIR 271


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,202
Number of Sequences: 438
Number of extensions: 2386
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12066642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)