Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_C20
(227 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 43 5e-06
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 34 0.003
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 31 0.020
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 30 0.047
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 27 0.25
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 26 0.77
SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces pomb... 25 1.8
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 25 1.8
SPAC22F3.13 |tsc1||hamartin|Schizosaccharomyces pombe|chr 1|||Ma... 24 3.1
SPBC18H10.09 |||zinc finger protein, zf-CHY type|Schizosaccharom... 23 4.1
SPBC31F10.03 |||ChaC-like protein|Schizosaccharomyces pombe|chr ... 23 4.1
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 23 5.4
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 23 5.4
SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces ... 23 5.4
SPAC1687.11 |spb1||rRNA methyltransferase Spb1 |Schizosaccharomy... 23 7.2
SPAC6B12.09 |trm10||tRNA m|Schizosaccharomyces pombe|chr 1|||Manual 23 7.2
SPBC26H8.10 |dis3|rrp44|3'-5' exoribonuclease subunit Dis3 |Schi... 23 7.2
SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c... 23 7.2
SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|ch... 22 9.5
SPAC227.15 |||protein phosphatase regulatory subunit Reg1 |Schiz... 22 9.5
SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 22 9.5
SPCC553.06 |||oligosaccharyltransferase subunit|Schizosaccharomy... 22 9.5
SPBC1D7.04 |mlo3||RNA annealing factor Mlo3|Schizosaccharomyces ... 22 9.5
SPAC25A8.02 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 22 9.5
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 22 9.5
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 22 9.5
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 43.2 bits (97), Expect = 5e-06
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = +1
Query: 148 FAKDFLAGGISAAVSKTAVAPIERVK 225
F DF+ GG+SAAVSKTA APIERVK
Sbjct: 27 FFFDFMMGGVSAAVSKTAAAPIERVK 52
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 33.9 bits (74), Expect = 0.003
Identities = 13/21 (61%), Positives = 20/21 (95%)
Frame = +1
Query: 163 LAGGISAAVSKTAVAPIERVK 225
L+GG++A VS+TAV+P+ER+K
Sbjct: 25 LSGGVAATVSRTAVSPLERMK 45
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 31.1 bits (67), Expect = 0.020
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 136 DPVAFAKDFLAGGISAAVSKTAVAPIERVK 225
DP F++GGI+ VS+T AP++R+K
Sbjct: 123 DPKNNVGYFISGGIAGIVSRTCTAPLDRLK 152
Score = 23.0 bits (47), Expect = 5.4
Identities = 7/22 (31%), Positives = 17/22 (77%)
Frame = +1
Query: 160 FLAGGISAAVSKTAVAPIERVK 225
+LAGG++ +V++ + P++ +K
Sbjct: 232 YLAGGMAGSVAQMFIYPVDTLK 253
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 29.9 bits (64), Expect = 0.047
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +1
Query: 154 KDFLAGGISAAVSKTAVAPIERVK 225
K +AGG + V+K+ VAP++RVK
Sbjct: 19 KSGIAGGTAGCVAKSVVAPLDRVK 42
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 27.5 bits (58), Expect = 0.25
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 106 TXSNKMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVK 225
T +N SN P + F+AGG++ + A AP++ VK
Sbjct: 35 TKANNASNERAPPPLSH-FIAGGVAGMLGAIATAPLDVVK 73
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 25.8 bits (54), Expect = 0.77
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 154 KDFLAGGISAAVSKTAVAPIERVK 225
KD +AGG + S VAP++ VK
Sbjct: 7 KDAIAGGAAGLASSLVVAPLDVVK 30
>SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 394
Score = 24.6 bits (51), Expect = 1.8
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -2
Query: 148 TRLDRRDSTFCSXMWSSLGGYLRTRK 71
TRL DS CS + S GG R K
Sbjct: 106 TRLKENDSRLCSPLASPTGGLKRPAK 131
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 24.6 bits (51), Expect = 1.8
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1
Query: 163 LAGGISAAVSKTAVAPIERVK 225
LAGGIS+ + + +AP + +K
Sbjct: 21 LAGGISSVICRFMIAPFDVIK 41
>SPAC22F3.13 |tsc1||hamartin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 899
Score = 23.8 bits (49), Expect = 3.1
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +1
Query: 49 PFRVC--RSPSLSASIHPKRTTXSNKMSNLAD 138
PF + ++PS+S S+H T ++SN D
Sbjct: 472 PFSISWPQNPSISGSVHSATTFDKAQLSNTED 503
>SPBC18H10.09 |||zinc finger protein, zf-CHY
type|Schizosaccharomyces pombe|chr 2|||Manual
Length = 428
Score = 23.4 bits (48), Expect = 4.1
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +2
Query: 35 FSWFFHSVCAEVLPCPQ 85
F WF S C V PC +
Sbjct: 336 FRWFRFSCCDRVYPCDE 352
>SPBC31F10.03 |||ChaC-like protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 23.4 bits (48), Expect = 4.1
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 45 FSIPCVPKSFLVRKYPPKEDH 107
+SIPC K ++ R + EDH
Sbjct: 28 YSIPCFIKGYVRRFWMRSEDH 48
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 23.0 bits (47), Expect = 5.4
Identities = 14/61 (22%), Positives = 29/61 (47%)
Frame = -1
Query: 194 LETAAEIPPARKSLANATGSARFDILFDXVVLFGWILADKEGLRHTRNGKTTKNEPPIFN 15
LET + P R+ A + + ++ + L + +DK+ +R T NEP +++
Sbjct: 1005 LETTGDTPSKRELPATPSWTRDSSLIKETTNLN--LDSDKKFVRETYTSSNQTNEPDVYD 1062
Query: 14 Q 12
+
Sbjct: 1063 K 1063
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 23.0 bits (47), Expect = 5.4
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +1
Query: 145 AFAKDFLAGGISAAVSKTAVA-PIERVK 225
+F KDFLA G+S V++ V P + VK
Sbjct: 16 SFTKDFLA-GVSGGVAQVLVGQPFDCVK 42
>SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 23.0 bits (47), Expect = 5.4
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = -1
Query: 224 LTRSMGATAVLETAAEIPPARKSLANATGSARFD 123
+ S+G++ L+ + PP+ S N S+R+D
Sbjct: 134 MLNSLGSSLSLKKSVSRPPSSMSRTNLDVSSRWD 167
>SPAC1687.11 |spb1||rRNA methyltransferase Spb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 802
Score = 22.6 bits (46), Expect = 7.2
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1
Query: 101 LFGWILADKEGLRHTRNG 48
LFG A+K GL+ NG
Sbjct: 409 LFGLATAEKHGLKELENG 426
>SPAC6B12.09 |trm10||tRNA m|Schizosaccharomyces pombe|chr 1|||Manual
Length = 304
Score = 22.6 bits (46), Expect = 7.2
Identities = 10/27 (37%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -2
Query: 103 SSLGGYLRTRKDFGTHGMEKP-RKTNP 26
++ GG L+TR+DF G + ++ NP
Sbjct: 138 TNFGGRLKTRQDFVLKGQQNNWKRYNP 164
>SPBC26H8.10 |dis3|rrp44|3'-5' exoribonuclease subunit Dis3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 970
Score = 22.6 bits (46), Expect = 7.2
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -2
Query: 157 LWRTRLDRRDSTFCS 113
LW+ R D RD CS
Sbjct: 492 LWKNRKDFRDKLICS 506
>SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1687
Score = 22.6 bits (46), Expect = 7.2
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 92 TQRGPHXRTKCRISPIQSRSPKTFWL 169
TQ G CRI+ + SP+ F+L
Sbjct: 1440 TQLGARQSNICRITILMLSSPRDFFL 1465
>SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 867
Score = 22.2 bits (45), Expect = 9.5
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -3
Query: 87 TCGQGRTSAHTEWKNHEKRTPD 22
T QG T HE+R+PD
Sbjct: 38 TLQQGAPDEETRLLEHERRSPD 59
>SPAC227.15 |||protein phosphatase regulatory subunit Reg1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 873
Score = 22.2 bits (45), Expect = 9.5
Identities = 10/39 (25%), Positives = 18/39 (46%)
Frame = +3
Query: 6 NLLIKNRGFVFRGFSIPCVPKSFLVRKYPPKEDHXIEQN 122
+LL +NRG +F + + + ++YP I N
Sbjct: 451 SLLARNRGDIFSNRNHATIRSALFSQRYPSHSKRHIHFN 489
>SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 533
Score = 22.2 bits (45), Expect = 9.5
Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Frame = -1
Query: 203 TAVLETAAEIPPAR-KSLANATGSARFDILFDXVVLFGWILAD---KEGLRHTRNG 48
TA LE IP AR LAN S V G + EGL+HTR+G
Sbjct: 454 TATLEQLTPIPKARWNQLANKHPSLSNSAASPPVSSPGLRRSHIPVHEGLKHTRDG 509
>SPCC553.06 |||oligosaccharyltransferase subunit|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 271
Score = 22.2 bits (45), Expect = 9.5
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +2
Query: 71 LPCPQVSTQRGPHXRTKCRISPIQSRSPK 157
LP Q+S P K SP+ SPK
Sbjct: 143 LPLGQLSINVPPSLYHKAEFSPLDELSPK 171
>SPBC1D7.04 |mlo3||RNA annealing factor Mlo3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 199
Score = 22.2 bits (45), Expect = 9.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 74 PCPQVSTQRGPHXRTKCRISPIQSR 148
PC +VS GP+ R+K + I SR
Sbjct: 81 PCKRVSLAYGPNGRSKGIATIIFSR 105
>SPAC25A8.02 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 390
Score = 22.2 bits (45), Expect = 9.5
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +1
Query: 73 SLSASIHPKRTTXSNKMSNLADPVAFAKDFLAG 171
SLS +H ++ + +SN + A LAG
Sbjct: 83 SLSCDLHSRKQLIEDDLSNRKKSINIASQKLAG 115
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 22.2 bits (45), Expect = 9.5
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -1
Query: 197 VLETAAEIPPARKSLANATG 138
V + ++++ AR SLA+ATG
Sbjct: 422 VKQVSSQLEEARSSLAHATG 441
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 22.2 bits (45), Expect = 9.5
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 160 FLAGGISAAVSKTAVAPIERVK 225
FL+GG++A + T P E +K
Sbjct: 27 FLSGGLAACGAVTLTNPFEVIK 48
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 942,192
Number of Sequences: 5004
Number of extensions: 15732
Number of successful extensions: 66
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 2,362,478
effective HSP length: 55
effective length of database: 2,087,258
effective search space used: 41745160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -