Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_C19
         (103 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    18   7.8  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    18   7.8  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 18.2 bits (35), Expect = 7.8
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = +2

Query: 2   RRNTHRHCGSV 34
           +RN+ + CGS+
Sbjct: 406 KRNSEKKCGSL 416


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory
          receptor candidate 59 protein.
          Length = 489

 Score = 18.2 bits (35), Expect = 7.8
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +3

Query: 51 WFANKLKCLC 80
          WF +KL  LC
Sbjct: 14 WFLSKLFLLC 23


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,174
Number of Sequences: 336
Number of extensions: 141
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 122,585
effective HSP length: 15
effective length of database: 117,545
effective search space used:  2115810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)