Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_C18
         (399 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    24   0.48 
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   0.84 
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   5.9  
AF506022-1|AAM46898.1|  685|Tribolium castaneum polyubiquitin pr...    20   7.8  
AF506020-1|AAM46896.1|  112|Tribolium castaneum polyubiquitin pr...    20   7.8  

>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 24.2 bits (50), Expect = 0.48
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +2

Query: 170 SWVQQEQHVVNELSNALQGQKVNAVICVAGGWAGGNA 280
           SW + + H +  ++N         V+   GGW  GNA
Sbjct: 74  SWNEIDLHGLENVANLKSVNPDLKVLISIGGWNAGNA 110


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.4 bits (48), Expect = 0.84
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 320 AATSSLPAYSGPWQRFRLPN 261
           AAT+ +  Y G W  +RL N
Sbjct: 17  AATNKVVCYHGIWSTYRLNN 36


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
 Frame = -1

Query: 147 LKSALSFGLRSIFATHQ--LEDLK 82
           L+  + FG+RS  +TH+  LE LK
Sbjct: 97  LRRLMDFGVRSAPSTHEELLEVLK 120


>AF506022-1|AAM46898.1|  685|Tribolium castaneum polyubiquitin
           protein.
          Length = 685

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -1

Query: 120 RSIFATHQLED 88
           RSIFA  QLED
Sbjct: 422 RSIFAGKQLED 432


>AF506020-1|AAM46896.1|  112|Tribolium castaneum polyubiquitin
           protein.
          Length = 112

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -1

Query: 120 RSIFATHQLED 88
           RSIFA  QLED
Sbjct: 90  RSIFAGKQLED 100


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,694
Number of Sequences: 336
Number of extensions: 2009
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8541369
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)