Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_C18
         (399 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81113-1|CAB03278.1|  236|Caenorhabditis elegans Hypothetical pr...   153   6e-38
U00036-3|AAT92065.1|  529|Caenorhabditis elegans Dumpy : shorter...    27   5.0  
U00036-2|AAK29859.1|  592|Caenorhabditis elegans Dumpy : shorter...    27   5.0  
Z69661-1|CAA93493.1|  253|Caenorhabditis elegans Hypothetical pr...    27   6.5  
Z92837-6|CAD21654.1|  483|Caenorhabditis elegans Hypothetical pr...    26   8.7  
Z92837-5|CAB07403.1|  528|Caenorhabditis elegans Hypothetical pr...    26   8.7  
Z81097-11|CAB03170.2|  485|Caenorhabditis elegans Hypothetical p...    26   8.7  
Z50741-1|CAA90609.1|  395|Caenorhabditis elegans Hypothetical pr...    26   8.7  
U88168-4|AAC24402.1|  342|Caenorhabditis elegans Hypothetical pr...    26   8.7  
AL031621-9|CAC70087.1|  483|Caenorhabditis elegans Hypothetical ...    26   8.7  
AL031621-8|CAA20936.1|  528|Caenorhabditis elegans Hypothetical ...    26   8.7  
AF072381-1|AAC62468.1|  483|Caenorhabditis elegans Akt/PKB serin...    26   8.7  

>Z81113-1|CAB03278.1|  236|Caenorhabditis elegans Hypothetical
           protein T03F6.1 protein.
          Length = 236

 Score =  153 bits (370), Expect = 6e-38
 Identities = 70/128 (54%), Positives = 96/128 (75%), Gaps = 1/128 (0%)
 Frame = +2

Query: 17  MTSGRIIIYGGRGALGSACVNHFKSSNWWVANIDLNPNESADFNVAVPKDASWVQQEQHV 196
           M+SG++I+YGG+GALGSA +  FK + + V NIDL+ N+ AD N+ V  + +W +QEQ +
Sbjct: 1   MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSI 60

Query: 197 VNELSNALQGQKVNAVICVAGGWAGGNA-AKDLSKQADLMWRQSVWSSTIAATLAAKYLA 373
           + + +++LQG +V+ V CVAGGWAGG+A +KD  K ADLM +QSVWSS IAA LA  +L 
Sbjct: 61  LEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLK 120

Query: 374 PGGLLALT 397
           PGGLL LT
Sbjct: 121 PGGLLQLT 128


>U00036-3|AAT92065.1|  529|Caenorhabditis elegans Dumpy : shorter
           than wild-typeprotein 31, isoform b protein.
          Length = 529

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 144 KSALSFGLRSIFATHQLEDLK*LTQADPSAPLP 46
           K  + FGL S+ A H L DL    + DP +  P
Sbjct: 3   KIFIIFGLLSLCAAHSLRDLSNKDEEDPPSSAP 35


>U00036-2|AAK29859.1|  592|Caenorhabditis elegans Dumpy : shorter
           than wild-typeprotein 31, isoform a protein.
          Length = 592

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 144 KSALSFGLRSIFATHQLEDLK*LTQADPSAPLP 46
           K  + FGL S+ A H L DL    + DP +  P
Sbjct: 3   KIFIIFGLLSLCAAHSLRDLSNKDEEDPPSSAP 35


>Z69661-1|CAA93493.1|  253|Caenorhabditis elegans Hypothetical
           protein F48F7.3 protein.
          Length = 253

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -3

Query: 157 HGNVEISTFIWV-KVYICDPPVGRFKVINASRPQRA 53
           HGN+E S F+W+   Y+    VG +K+   S  Q +
Sbjct: 151 HGNIEKSQFLWMDDWYVTRSLVGDYKISYYSLEQHS 186


>Z92837-6|CAD21654.1|  483|Caenorhabditis elegans Hypothetical
           protein F28H6.1b protein.
          Length = 483

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 346 CDCRTPDRLPPHQVCLLTQVLGSVSA 269
           CD + P+RL P  V LL+ +L  V A
Sbjct: 393 CDLKFPNRLSPEAVTLLSGLLERVPA 418


>Z92837-5|CAB07403.1|  528|Caenorhabditis elegans Hypothetical
           protein F28H6.1a protein.
          Length = 528

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 346 CDCRTPDRLPPHQVCLLTQVLGSVSA 269
           CD + P+RL P  V LL+ +L  V A
Sbjct: 393 CDLKFPNRLSPEAVTLLSGLLERVPA 418


>Z81097-11|CAB03170.2|  485|Caenorhabditis elegans Hypothetical
           protein K07A1.9a protein.
          Length = 485

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = +2

Query: 185 EQHVVNELSNALQGQKVNAVICVAGGWAGGNAAKDLSKQADLMWRQS 325
           E+ + N L   L+    ++V    G WA      D S   D+ WR+S
Sbjct: 41  EEDLTNGLEEELEVSSESSVT-TGGAWAHSMTVNDYSGLLDVGWRRS 86


>Z50741-1|CAA90609.1|  395|Caenorhabditis elegans Hypothetical
           protein F55G7.1 protein.
          Length = 395

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = +2

Query: 119 LNPNESADFNVAVPKDASWVQQEQHVVNELSNALQGQK 232
           L+  E+ +FN+A+ K A W+Q  + + +  +   Q Q+
Sbjct: 211 LSEPETPEFNLAILKVAKWLQMSKDIGDVFTGNGQAQR 248


>U88168-4|AAC24402.1|  342|Caenorhabditis elegans Hypothetical
           protein K11H12.8a protein.
          Length = 342

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = +2

Query: 290 LSKQADLMWRQSVWSSTIAATLAAKYLAPGGLLALT 397
           +SK+  ++ + ++W S +   ++  Y    G LALT
Sbjct: 92  VSKEQSILQKSAIWPSYVRERISTTYAYLAGSLALT 127


>AL031621-9|CAC70087.1|  483|Caenorhabditis elegans Hypothetical
           protein F28H6.1b protein.
          Length = 483

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 346 CDCRTPDRLPPHQVCLLTQVLGSVSA 269
           CD + P+RL P  V LL+ +L  V A
Sbjct: 393 CDLKFPNRLSPEAVTLLSGLLERVPA 418


>AL031621-8|CAA20936.1|  528|Caenorhabditis elegans Hypothetical
           protein F28H6.1a protein.
          Length = 528

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 346 CDCRTPDRLPPHQVCLLTQVLGSVSA 269
           CD + P+RL P  V LL+ +L  V A
Sbjct: 393 CDLKFPNRLSPEAVTLLSGLLERVPA 418


>AF072381-1|AAC62468.1|  483|Caenorhabditis elegans Akt/PKB
           serine/threonine kinase protein.
          Length = 483

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 346 CDCRTPDRLPPHQVCLLTQVLGSVSA 269
           CD + P+RL P  V LL+ +L  V A
Sbjct: 393 CDLKFPNRLSPEAVTLLSGLLERVPA 418


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,660,148
Number of Sequences: 27780
Number of extensions: 187950
Number of successful extensions: 549
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 548
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)