Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_C18
         (399 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    23   1.3  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   1.7  
AY739659-1|AAU85298.1|  288|Apis mellifera hyperpolarization-act...    22   2.2  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   3.0  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   3.0  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   6.9  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    20   9.1  

>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 15/58 (25%), Positives = 27/58 (46%)
 Frame = +2

Query: 149 VAVPKDASWVQQEQHVVNELSNALQGQKVNAVICVAGGWAGGNAAKDLSKQADLMWRQ 322
           +  P +ASW   E H+   ++  LQ +  N++I +      GN      + A  +W+Q
Sbjct: 148 IRTPTEASWHSPEAHI--SVAQKLQKEIPNSII-LDQYTNPGNPLAHYDQTAIEIWKQ 202


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 172 VGTTGATCSQRTK*RFARSESECCY 246
           +G    TC+ +TK  FA+ +  C Y
Sbjct: 433 IGCECKTCNSKTKCCFAQDDGLCPY 457


>AY739659-1|AAU85298.1|  288|Apis mellifera
           hyperpolarization-activated ion channelvariant T
           protein.
          Length = 288

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 11/49 (22%), Positives = 23/49 (46%)
 Frame = -2

Query: 398 QSRQVIHPAPSILQLMWLRLSNSRPIAATSSLPAYSGPWQRFRLPNHQR 252
           +S Q++H   ++  L   +L +   +   S L  Y   W+   +P +Q+
Sbjct: 194 ESFQILHAGRALRILRLAKLLSLVRLLRLSRLVRYVSQWEEVYIPLYQQ 242


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -3

Query: 196 YMLLLLYPRGIFR 158
           Y  LL YPR IFR
Sbjct: 382 YSSLLRYPRSIFR 394


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +2

Query: 35  IIYGGRGALGSACVNHFKSSNWWVANIDLNPNESA 139
           I+ GG  A         + SNW V  ++  P+E A
Sbjct: 72  IVVGGGAARAVVAGRLSEVSNWKVLLLEAGPDEPA 106


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -1

Query: 399 PVKASNPPGAKYFAANVAAIVELQ 328
           PV    PP    F+    A+VE Q
Sbjct: 3   PVFVKEPPNRVDFSNGTGAVVECQ 26


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -2

Query: 320 AATSSLPAYSGPWQRFRLPNHQRRK 246
           AA+++LP+   PW R +    + R+
Sbjct: 251 AASANLPSPLYPWMRSQFERKRGRQ 275


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,244
Number of Sequences: 438
Number of extensions: 2233
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9885360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)