Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_C16
         (657 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         23   1.9  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     23   2.6  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    22   4.5  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   5.9  

>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 58  YILFIVNFAKVNADCGIVSKDDWDG 132
           ++LF +  A V+A C  V K  +DG
Sbjct: 4   FVLFAILIAIVHASCASVPKVVYDG 28


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -2

Query: 110 TIPQSALTFAKFTINKI*TKQRSIFILQTHILR 12
           T+ + A T  + T NK+  + +++FIL   I+R
Sbjct: 181 TMNKIAETLDEDTKNKLIEESKTVFILNNEIIR 213


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -3

Query: 61  YKQNKEAYSSYKLIYY 14
           Y  N   Y++YK +YY
Sbjct: 104 YNYNNNNYNNYKKLYY 119


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +1

Query: 490 DSDYNVVGHRQLMATDSPGRKLYNIIRRWP 579
           DSDY    + + +   S  RKL NI+   P
Sbjct: 201 DSDYTDKSNEKKIPKSSGWRKLRNIVHWTP 230


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,001
Number of Sequences: 438
Number of extensions: 4884
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)