Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_C15
(596 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0036 + 25786530-25786756,25788000-25788076,25788538-257886... 37 0.014
07_03_1469 - 26742772-26743848 33 0.23
07_03_1465 - 26729872-26730909 33 0.23
07_03_1467 - 26736859-26736868,26737769-26738439 32 0.30
06_03_1338 - 29440373-29440534,29440993-29441083,29441799-294419... 32 0.30
02_04_0288 + 21607289-21608251 32 0.30
09_04_0411 + 17366559-17367497 32 0.40
08_02_1485 - 27466761-27467753 31 0.92
07_03_1464 + 26726527-26727552 31 0.92
07_03_1206 + 24878301-24879308 30 1.2
06_01_0782 - 5848381-5849394,5851143-5851255,5851337-5851440,585... 30 1.6
05_01_0124 + 852358-853257 30 1.6
03_02_0385 - 7980287-7981267 30 1.6
09_04_0412 + 17369935-17370873 29 2.1
07_03_1468 - 26739872-26740912 29 2.1
04_01_0519 + 6831912-6831978,6832333-6832488,6832748-6833098,683... 29 2.1
06_03_0840 + 25293314-25293838 29 2.8
03_02_0423 + 8321076-8322164 29 2.8
07_03_1669 + 28499143-28499409,28499915-28500055,28500528-285006... 28 4.9
09_04_0421 + 17417851-17418840 28 6.5
08_02_0995 - 23401390-23402379 28 6.5
05_01_0127 - 863755-865182 28 6.5
01_06_0314 - 28410897-28410902,28410995-28411054,28411149-28411697 28 6.5
09_04_0414 - 17393780-17394826 27 8.6
03_06_0249 + 32638112-32639140 27 8.6
>01_06_0036 +
25786530-25786756,25788000-25788076,25788538-25788625,
25788706-25788786,25788866-25788940,25789048-25789149,
25789589-25789726,25791559-25791585,25791696-25791786,
25792423-25792584
Length = 355
Score = 36.7 bits (81), Expect = 0.014
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Frame = +3
Query: 192 PVILYIHAGGFY-AFTGRSDVAGPHYFLDKDVVLVTINYRLATLGFMSTGDELAPGNNGM 368
PV+ ++ G + + + G ++ +++ I+YR G + GD ++ + G+
Sbjct: 145 PVVAFVTGGAWIIGYKAWGSLLGRR-LAERGIIVACIDYRNFPQG--TIGDMVSDASQGI 201
Query: 369 KDQVMAMRWIQRNIAGFGGDPNCVTITGCSAGSISVMLHMISPMSKGLFHRGISISASPV 548
++ NIA +GGDPN + + G SAG+ +I K + IS S + +
Sbjct: 202 S-------YVCNNIASYGGDPNRIYLVGQSAGAHIAACALIEQAVKESSGQSISWSVTQI 254
>07_03_1469 - 26742772-26743848
Length = 358
Score = 32.7 bits (71), Expect = 0.23
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = +3
Query: 192 PVILYIHAGGFYAFT---GRSDVAGPHYFLDKDVVLVTINYRLATLGFMSTGDELAPGNN 362
PV++Y H GGF F+ D D VV+V++NYRLA + P
Sbjct: 105 PVMVYYHGGGFALFSPAVAPFDGVCRRLCGDVGVVVVSVNYRLAP-------EHRYPA-- 155
Query: 363 GMKDQVMAMRWIQRN-IAGFGGDPNCVTITGC 455
D V A+R++ N I G GD V + C
Sbjct: 156 AYDDGVDALRFLDGNGIPGLDGDVVPVDLASC 187
>07_03_1465 - 26729872-26730909
Length = 345
Score = 32.7 bits (71), Expect = 0.23
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = +3
Query: 192 PVILYIHAGGFYAFTGRS---DVAGPHYFLDKDVVLVTINYRLA 314
PV++Y H GGF F+ S D V+V++NYRLA
Sbjct: 91 PVVVYFHGGGFVLFSAASRPYDALCRRISRGVGAVVVSVNYRLA 134
>07_03_1467 - 26736859-26736868,26737769-26738439
Length = 226
Score = 32.3 bits (70), Expect = 0.30
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = +3
Query: 192 PVILYIHAGGFYAFTGRS---DVAGPHYFLDKDVVLVTINYRLA 314
PV++Y H GGF T S D + V+V++NYRLA
Sbjct: 102 PVVVYFHGGGFALLTAASSQYDALCRRLCRELRAVVVSVNYRLA 145
>06_03_1338 -
29440373-29440534,29440993-29441083,29441799-29441942,
29442094-29442159,29442589-29442729,29443077-29443178,
29443264-29443338,29443469-29443549,29443670-29443739,
29444063-29444139,29444392-29444660
Length = 425
Score = 32.3 bits (70), Expect = 0.30
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Frame = +3
Query: 192 PVILYIHAGGFY-AFTGRSDVAGPHYFLDKDVVLVTINYRLATLGFMSTGDELAPGNNGM 368
PV+ ++ G + + G + G ++ +++ I+YR G + GD + + G+
Sbjct: 153 PVVAFVTGGAWIIGYKGWGALLGRR-LAERGILVACIDYRNFPQG--TIGDMVEDASQGI 209
Query: 369 KDQVMAMRWIQRNIAGFGGDPNCVTITGCSAGS 467
++ NIA +GGDP + + G SAG+
Sbjct: 210 A-------FVCNNIASYGGDPERIYLVGQSAGA 235
>02_04_0288 + 21607289-21608251
Length = 320
Score = 32.3 bits (70), Expect = 0.30
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Frame = +3
Query: 192 PVILYIHAGGFYAFTGRSDVAGPHYFLDK-----DVVLVTINYRLATLGFMSTGDELAPG 356
PV++Y+H GGF A + S H FL++ + V+++YRLA + P
Sbjct: 75 PVVVYVHGGGFVAESAAS--PSYHLFLNRLAAACPALCVSVDYRLAP-------EHPLPA 125
Query: 357 NNGMKDQVMAMRWIQRNI---AGFGGDPNCVTITGCSAG 464
G D + A+RW+ GD + V + G SAG
Sbjct: 126 --GYDDCLAALRWVLSAADPWVAARGDLDRVFLAGDSAG 162
>09_04_0411 + 17366559-17367497
Length = 312
Score = 31.9 bits (69), Expect = 0.40
Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 8/99 (8%)
Frame = +3
Query: 192 PVILYIHAGGFYAFTGRSDVAGPHYFLDK-----DVVLVTINYRLATLGFMSTGDELAPG 356
PV++Y H GGF +D A H +L+ V++V++NYRLA P
Sbjct: 74 PVLVYFHGGGF--IIESADSATYHNYLNSVAAAAGVLVVSVNYRLAPEN---------PL 122
Query: 357 NNGMKDQVMAMRW---IQRNIAGFGGDPNCVTITGCSAG 464
G D A++W Q + GD V + G SAG
Sbjct: 123 PAGYDDSWAALQWAVSAQDDWIAEHGDTERVFVAGDSAG 161
>08_02_1485 - 27466761-27467753
Length = 330
Score = 30.7 bits (66), Expect = 0.92
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 4/99 (4%)
Frame = +3
Query: 192 PVILYIHAGGFYAFTGRS---DVAGPHYFLDKDVVLVTINYRLATLGFMSTG-DELAPGN 359
PVILY H GGF F+ S + ++V+++YRLA + D+ A
Sbjct: 80 PVILYFHGGGFVLFSTGSVFYHASCEAMAAAVPAIVVSLDYRLAPEHRLPAAYDDAASAV 139
Query: 360 NGMKDQVMAMRWIQRNIAGFGGDPNCVTITGCSAGSISV 476
++D W IA G C + S G++++
Sbjct: 140 LWLRDAAAGDPW----IAAHGDLSRCFVMGSSSGGNMAL 174
>07_03_1464 + 26726527-26727552
Length = 341
Score = 30.7 bits (66), Expect = 0.92
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +3
Query: 192 PVILYIHAGGFYAFTGRS---DVAGPHYFLDKDVVLVTINYRLA 314
PV+++ H GGF F+ S D + V+V++NYRLA
Sbjct: 83 PVVVFFHGGGFVLFSAASCYYDRLCRRICRELRAVVVSVNYRLA 126
>07_03_1206 + 24878301-24879308
Length = 335
Score = 30.3 bits (65), Expect = 1.2
Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 12/175 (6%)
Frame = +3
Query: 6 MHNRLSGNSGSTSKTDINYKDVVDASKEGPACPLPAPADYYVDEDCLTINVY----TXXX 173
+H+ G+ ++ ++ D V P A +D+ V +D L + ++
Sbjct: 27 LHSASLRRDGTVNRFLLSLFDRVVPPNPAPDAAGVASSDHAVSDD-LRVRMFFPGAAARD 85
Query: 174 XXXXXYPVILYIHAGGFY---AFTGRSDVAGPHYFLDKDVVLVTINYRLA-TLGFMSTGD 341
PV++Y H GGF + + D + V+ ++++RLA GF
Sbjct: 86 GGGDHLPVVVYFHGGGFVFHSVASAQFDALCRRFASAIPAVVASVDFRLAPEHGFP---- 141
Query: 342 ELAPGNNGMKDQVMAMRWIQRNIAGFGG----DPNCVTITGCSAGSISVMLHMIS 494
AP ++G A+RW+ +AG GG P V + G SAG +V H+++
Sbjct: 142 --APYDDGK----AALRWV---LAGAGGALPSPPATVFVAGDSAGG-NVAHHVVA 186
>06_01_0782 -
5848381-5849394,5851143-5851255,5851337-5851440,
5851584-5851660,5851740-5852132,5852267-5852482,
5852826-5852923,5853503-5853637,5853745-5853811,
5853999-5854094,5854555-5854683
Length = 813
Score = 29.9 bits (64), Expect = 1.6
Identities = 33/103 (32%), Positives = 46/103 (44%), Gaps = 11/103 (10%)
Frame = +3
Query: 192 PVILYIHAGGFYAFTGRSDVAGPHYFLDKDVVLVTINYRLATLGFMSTGDELAPGN---N 362
PV++Y H GGF TG H +L+ D+V R +G +S LAP N
Sbjct: 564 PVVVYFHGGGF--VTGSPARPSTHAYLN-DLVA-----RAGAIG-VSVYYRLAPENPLPA 614
Query: 363 GMKDQVMAMRWIQRNIAGFGGDP--------NCVTITGCSAGS 467
+D A+RW G G DP + + + GCSAG+
Sbjct: 615 AYEDAWAAVRWAATR--GDGADPWLLDHADLSRLFLAGCSAGA 655
>05_01_0124 + 852358-853257
Length = 299
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = -3
Query: 429 DLHRTLRCSAVSIASPSPGPSFRCCRVRVRLPYS*SRELLDD 304
D++ CS S ASPSP S RC RLP S EL+++
Sbjct: 136 DVYGLFTCSEPS-ASPSPSWSVRCSIYLNRLPREVSDELMEE 176
>03_02_0385 - 7980287-7981267
Length = 326
Score = 29.9 bits (64), Expect = 1.6
Identities = 24/115 (20%), Positives = 50/115 (43%)
Frame = +3
Query: 192 PVILYIHAGGFYAFTGRSDVAGPHYFLDKDVVLVTINYRLATLGFMSTGDELAPGNNGMK 371
P++LY H GG+ F S+ + + TI +A++ + + P +
Sbjct: 80 PLVLYFHGGGYVLFRAASE----PFHNTCTALAATIPAVVASVDYRLAPEHRLPA--AFE 133
Query: 372 DQVMAMRWIQRNIAGFGGDPNCVTITGCSAGSISVMLHMISPMSKGLFHRGISIS 536
D A+RW++ AG + + G AG+ ++ + +G+ RG+ ++
Sbjct: 134 DAADAVRWVRSYAAGC----RPLFLMGSHAGASIAFRAALAAVDEGVELRGLILN 184
>09_04_0412 + 17369935-17370873
Length = 312
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
Frame = +3
Query: 192 PVILYIHAGGFYAFTGRSDVAGPHYFLDK-----DVVLVTINYRLA 314
PV++Y H GGF +D A H +L+ V++V+++YRLA
Sbjct: 74 PVLVYFHGGGF--IIESADSATYHNYLNSAAAAAGVLVVSVDYRLA 117
>07_03_1468 - 26739872-26740912
Length = 346
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3
Query: 192 PVILYIHAGGFYAFTGRSDVAGPHYFLDKDVVLVTINYRLA 314
PV++Y H GGF F+ S A V+V+++YRLA
Sbjct: 88 PVVVYFHGGGFTLFSAASR-AYDALCRTLCAVVVSVDYRLA 127
>04_01_0519 +
6831912-6831978,6832333-6832488,6832748-6833098,
6833481-6833662,6833756-6834004,6834182-6834406,
6837492-6837791,6838642-6839215,6839959-6840059
Length = 734
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 432 NCVTITGCSAGSISVMLHMISPMSKGLFHRGISISASPVNK 554
+ + +T C I V L +ISP KGLF +++ PV++
Sbjct: 119 SAIKVTLCIWEEICVSLELISPSLKGLFEFCVALVEPPVSE 159
>06_03_0840 + 25293314-25293838
Length = 174
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +2
Query: 287 ARHYQLSSSNSRLYEYGRRTRTR---QQRNEGPGDGDAMDTA 403
ARH Q++ N+RL E R R R + G GDG+A + A
Sbjct: 119 ARHAQMARENARLAEEARALRERLPLRGGGGGGGDGEAEEEA 160
>03_02_0423 + 8321076-8322164
Length = 362
Score = 29.1 bits (62), Expect = 2.8
Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +3
Query: 192 PVILYIHAGGFYAFTGRSDVAGPHYFLDKDVVLVTINYRLATLGFMSTGDELAPGNN--- 362
PV++Y H GGF G + + H FL K A MS LAP N
Sbjct: 103 PVVVYFHGGGF--CVGSAAWSCYHEFLAKLAA-------RAGCAVMSVDYRLAPENRLPA 153
Query: 363 GMKDQVMAMRWIQRNIA 413
D V A+RW+++ A
Sbjct: 154 AFDDGVTAVRWLRQQAA 170
>07_03_1669 +
28499143-28499409,28499915-28500055,28500528-28500659,
28501185-28501373,28501503-28501580,28502267-28502386,
28502701-28502818,28503012-28503280,28503428-28503622,
28503737-28503879,28504096-28504180,28504270-28504479,
28504559-28504711,28504862-28504966,28505044-28505235
Length = 798
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +2
Query: 323 LYEYGRRTRTRQQRNEGPGDGDAMDTAEHRRVRWRSQLCHDHWLQRWIYQCDAAYDF 493
L +YGRR +++ E G T E + R++ L HWL+ I + D++ F
Sbjct: 167 LQKYGRRDNYCKRQVERWGRQYLSSTGEGKPARYQKMLDLAHWLKEHIPKEDSSAGF 223
>09_04_0421 + 17417851-17418840
Length = 329
Score = 27.9 bits (59), Expect = 6.5
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +3
Query: 192 PVILYIHAGGF---YAFTGRSDVAGPHYFLDKDVVLVTINYRLATLGFMSTGDELAPGNN 362
PV+++ H GGF AF + V++V++ YRLA + P
Sbjct: 80 PVLVFFHGGGFCLGSAFDAATHGHANRLAARAGVIVVSVEYRLAP-------ERPVPAL- 131
Query: 363 GMKDQVMAMRWIQRNIAGFGGDP 431
D A++W+ + AG G +P
Sbjct: 132 -YDDAWAALQWVASHAAGEGQEP 153
>08_02_0995 - 23401390-23402379
Length = 329
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = +3
Query: 192 PVILYIHAGGFYAFTGRSDVAGPH---YFLDKDVVLVTINYRLA 314
PV++Y H GGF + S V VV V+++YRLA
Sbjct: 73 PVVVYFHGGGFVVHSAFSRVHSRFLNALVAAAGVVAVSVDYRLA 116
>05_01_0127 - 863755-865182
Length = 475
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -3
Query: 408 CSAVSIASPSPGPSFRCCRVRVRLPYS*SRELLDD 304
CS S ASPSP S RC RLP S EL+++
Sbjct: 323 CSEPS-ASPSPSWSVRCSIYLNRLPREVSDELMEE 356
>01_06_0314 - 28410897-28410902,28410995-28411054,28411149-28411697
Length = 204
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -3
Query: 435 SWDLHRTLRCSAVSIASPSP 376
SW HR LRCS +SP P
Sbjct: 52 SWGTHRLLRCSKNPASSPPP 71
>09_04_0414 - 17393780-17394826
Length = 348
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Frame = +3
Query: 156 VYTXXXXXXXXYPVILYIHAGGFYAFTGRSDVAGPHYFLD-----KDVVLVTINYRLA 314
+Y PV+LY H G F + + + H +L+ V+ V++NYRLA
Sbjct: 91 LYLPSFRATAKVPVLLYFHGGAFVVESAFTPIY--HAYLNTLAAKAGVLAVSVNYRLA 146
>03_06_0249 + 32638112-32639140
Length = 342
Score = 27.5 bits (58), Expect = 8.6
Identities = 27/112 (24%), Positives = 51/112 (45%), Gaps = 6/112 (5%)
Frame = +3
Query: 192 PVILYIHAGGFYAFTGRSDVAGPHYFL-----DKDVVLVTINYRLATLGFM-STGDELAP 353
PV++Y H GG+ F G ++ H + V+++ +YRLA + + D+ A
Sbjct: 78 PVLVYFHGGGY--FIGSFEMDNFHACCLRLAHELPAVVLSADYRLAPEHRLPAAHDDAAT 135
Query: 354 GNNGMKDQVMAMRWIQRNIAGFGGDPNCVTITGCSAGSISVMLHMISPMSKG 509
+ ++DQ +A D V ++G SAG+ ++ H+ + G
Sbjct: 136 AMSWVRDQAVASGDAADPWLAESADFGRVFVSGDSAGA-GIVHHVALRLGSG 186
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,016,027
Number of Sequences: 37544
Number of extensions: 436345
Number of successful extensions: 1276
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1275
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1423789920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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