Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_C14
(571 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0254 - 14879724-14880635 33 0.12
11_06_0295 + 22033367-22034947,22035030-22035137,22035230-220353... 31 0.85
02_04_0376 - 22474473-22476947 30 1.5
07_03_1157 - 24419157-24419948 29 2.6
07_03_1155 - 24413270-24413728 29 2.6
04_04_0294 + 24204563-24204748,24205531-24205620,24205980-242062... 29 2.6
03_01_0084 + 676538-676669,677828-677959,678085-678210,678820-67... 29 2.6
05_04_0374 - 20736615-20737037,20737148-20737639,20738145-207384... 29 3.4
01_06_0333 + 28528413-28529364,28529504-28529539,28529800-28530872 29 3.4
11_06_0634 - 25685216-25685329,25685407-25685511,25685681-256857... 28 4.6
06_03_0561 - 22183140-22183185,22183273-22183442,22183554-221836... 28 4.6
03_01_0310 + 2445870-2446242,2447976-2448079,2448396-2449865 28 4.6
11_01_0770 - 6447739-6448158 28 6.0
07_03_1425 + 26489446-26491425 28 6.0
05_03_0378 - 13278428-13279310,13279411-13279500,13279787-13279866 28 6.0
04_03_0280 + 13854758-13855585 28 6.0
08_02_1426 + 27009720-27010787,27011846-27012517,27012999-270137... 27 8.0
08_01_0800 - 7738035-7738381,7739951-7740521 27 8.0
06_03_0606 - 22689935-22689998,22690716-22691159,22691669-226920... 27 8.0
01_07_0021 - 40533864-40534583,40534779-40534814,40534909-405350... 27 8.0
>08_02_0254 - 14879724-14880635
Length = 303
Score = 33.5 bits (73), Expect = 0.12
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +2
Query: 413 RPNLSASGAGVWNFDKNTRLSAGGSLSTMGRGKPDVAFQVHSSTISKADV 562
RP +S G K +++S GG+ T+G P+V ++ H + +K+DV
Sbjct: 144 RPKISDFGLAKLCKPKESKISIGGARGTIGYMAPEVFWRHHGAVTTKSDV 193
>11_06_0295 +
22033367-22034947,22035030-22035137,22035230-22035370,
22035576-22035625,22036100-22036168,22036649-22036781,
22037634-22037747,22037826-22038038,22038387-22038500,
22038768-22038900,22039304-22039416,22040204-22040284,
22040397-22040483
Length = 978
Score = 30.7 bits (66), Expect = 0.85
Identities = 21/65 (32%), Positives = 34/65 (52%)
Frame = +2
Query: 125 IINSRSKPVTLETSRGTRT*ATEKYSVHSDKMTMDYSVKLDTRGSFSMTIAVSWKGKHTA 304
+IN + L + T+ E SV D++ DY+ K+D R SF+M+ + + KH +
Sbjct: 337 LINKIVRTANLYWNSMTQEQRGEFLSVRFDELQEDYN-KVD-RSSFTMSDVLRFGEKHNS 394
Query: 305 PGFWV 319
FWV
Sbjct: 395 YRFWV 399
>02_04_0376 - 22474473-22476947
Length = 824
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = -3
Query: 329 SPAGPKTLVPYACPSNLPRS-SLKNCRVYPALPNNPSSFCPSVPNTFPLPM 180
SPA P++ P A ++L + + + P+LP P+ PS+P + P+P+
Sbjct: 4 SPALPRSTNPAALLAHLAAVLTSPDWFLNPSLPRLPALLTPSLPESLPVPL 54
>07_03_1157 - 24419157-24419948
Length = 263
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = -3
Query: 344 PKFEVSPAGPKTLVPYACPSNLPRSSLKNCRVYPALPNNPSSFCPSVP 201
P V P PK VP+A LP+ L P LP + P VP
Sbjct: 168 PPHPVVPELPKPEVPHAAVPELPKPELPPHPAVPELPKHEEPPHPVVP 215
>07_03_1155 - 24413270-24413728
Length = 152
Score = 29.1 bits (62), Expect = 2.6
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = -3
Query: 350 LPPKFEVSPAGPKTLVPYACPSNLPRSSLKNCRVYPALPNNPSSFCPSVPNTFPLPMFLS 171
LPP E+ P PK +P P LPR + +PA+P P P +P +P L
Sbjct: 44 LPPHPEL-PELPKPELPPPLPE-LPRPVVPELPPHPAVPELPPLPKPELPPHPVVPEMLP 101
Query: 170 H 168
H
Sbjct: 102 H 102
Score = 28.7 bits (61), Expect = 3.4
Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = -3
Query: 335 EVSPAGPKTLVPY-ACPSNLPRSSLKNCRVYPALPNNPSSFCPSVPNTFPLP 183
E+ P L P+ P LP + YPA+P P P P PLP
Sbjct: 81 ELPPLPKPELPPHPVVPEMLPHPVVPELPHYPAVPGFPKHGLPPKPELPPLP 132
>04_04_0294 +
24204563-24204748,24205531-24205620,24205980-24206211,
24207180-24207457,24207576-24207647,24208054-24208295,
24208781-24209197,24209296-24209497,24209624-24209738,
24209821-24209906,24210235-24210354,24210431-24210519,
24210588-24210669,24211072-24211263,24211546-24211668
Length = 841
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 85 VSMPPSYKERYPEYYKFSKQARHPRDVTWDKNIGNGKV 198
+++P S + +Y K Q + PR + W KN+G K+
Sbjct: 644 LTVPASVDQLLSDYAKRFHQIKTPRKLLWKKNLGTVKL 681
>03_01_0084 +
676538-676669,677828-677959,678085-678210,678820-678882,
678964-679061,679133-679340,679859-679930,680016-680108,
680297-680398,680568-680665,681059-681140,681274-681362,
681960-682065,682145-682210,682527-682633,682907-683027,
683226-683411,683490-683789,683887-683967,684061-684225,
684297-684383,684476-684601,684750-684830,684917-684988,
685353-685364
Length = 934
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = -2
Query: 315 QNPGAVCLPFQLTAIVIEKLPRVSSFTE*SIVILSECTEYFSVA 184
+ PG C P +L AI+ +KLP VS + + I EYF ++
Sbjct: 504 RRPG--CSPKELFAIINDKLPTVSYESYIDVEIQQRAVEYFELS 545
>05_04_0374 -
20736615-20737037,20737148-20737639,20738145-20738422,
20738576-20738732
Length = 449
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = -3
Query: 338 FEVSPAGPKTLVPYACPSNLPRSSLKNCRVYPALPNNPSSFCPSVPNT 195
F+ S GP+ Y P N + ++P LPN +S P +P++
Sbjct: 154 FKKSGLGPRIGEQYGAPFNEEEWEHADAEMFPLLPNVETSVFPLLPSS 201
>01_06_0333 + 28528413-28529364,28529504-28529539,28529800-28530872
Length = 686
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +1
Query: 271 DRGKLEGQAYGTRVLGPAGDTSNFGGRLDWS---NKNANAALDISKANRRKTKPVG 429
D G ++ ++VL +N+GG + WS +K+++ ++ + A + + KP G
Sbjct: 263 DSGFVDADTLASQVLPVVEGAANYGGIMLWSRSYDKDSSFSVKLQAALQNRNKPTG 318
>11_06_0634 -
25685216-25685329,25685407-25685511,25685681-25685740,
25685827-25685965,25686056-25686240,25686328-25686411,
25686499-25686621,25687088-25687267,25687364-25687433,
25687520-25687616,25687695-25687770,25688259-25688348,
25688383-25688529,25688647-25688715,25689004-25689177,
25689266-25689336,25689409-25689557,25690723-25690774,
25690865-25691120,25691196-25691287,25691420-25691541,
25691909-25692679,25692883-25692940,25693068-25693107,
25694462-25694595,25694685-25694793,25694896-25694991
Length = 1220
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/57 (31%), Positives = 23/57 (40%)
Frame = +1
Query: 97 PSYKERYPEYYKFSKQARHPRDVTWDKNIGNGKVFGTLGQNDDGLFGKAGYTRQFFN 267
PSY R F + V +DK I +G G L + D G F A R F+
Sbjct: 579 PSYGYRGRVMLAFEENGSSKIGVRFDKQIPDGNDLGGLCEEDHGFFCSADLLRPDFS 635
>06_03_0561 -
22183140-22183185,22183273-22183442,22183554-22183619,
22183911-22184010,22184072-22184164,22184259-22184352,
22185029-22185257,22185460-22185556,22187406-22187710
Length = 399
Score = 28.3 bits (60), Expect = 4.6
Identities = 22/76 (28%), Positives = 34/76 (44%)
Frame = +1
Query: 208 LGQNDDGLFGKAGYTRQFFNDDRGKLEGQAYGTRVLGPAGDTSNFGGRLDWSNKNANAAL 387
+G++D FG Q F+ +GQ G P FG R ++ +N + +
Sbjct: 183 MGKSDT--FGWLAQVEQLFSMPLTIEQGQ--GIEYHLPHRVMRQFGKRQEFPVENISIRV 238
Query: 388 DISKANRRKTKPVGKW 435
D+ K +R KTK V W
Sbjct: 239 DLDKYDRVKTKKVKDW 254
>03_01_0310 + 2445870-2446242,2447976-2448079,2448396-2449865
Length = 648
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +2
Query: 398 KQIGGRPNLSASGAGVWNFDKNTRLSA--GGSLSTMGRGKPDVAFQVHSSTISKADVVV 568
+++GGR + +G W+F ++T ++ G +L M G+ + SS ++ +D V
Sbjct: 360 RRMGGRDHFLVAGRTGWDFRRDTNINPNWGTNLLVMPGGRDMSVLVLESSLLNGSDYAV 418
>11_01_0770 - 6447739-6448158
Length = 139
Score = 27.9 bits (59), Expect = 6.0
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +1
Query: 193 KVFGTLGQNDDGLFGKAGYTRQFFND--DRGKLEGQAYGTRVLGPAGDTSNFGGRLDWSN 366
K+ G G D G + RQ+ +D + G G+ R G G+ GR+ WS
Sbjct: 4 KLVGEDGDGGDEDGGDDRWWRQWGSDLVEDGVGGGEDRWRRWRGTVGEDGGTAGRISWSR 63
Query: 367 KNANAA 384
+ A A+
Sbjct: 64 RTARAS 69
>07_03_1425 + 26489446-26491425
Length = 659
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -3
Query: 341 KFEVSPAGPKTLVPYACPSNLPRSSLKNCRVYPALPN 231
+F + A ++VPY P P SSL+ RVY P+
Sbjct: 312 RFRGAGARGDSVVPYLQPVQSPVSSLRMLRVYGTFPS 348
>05_03_0378 - 13278428-13279310,13279411-13279500,13279787-13279866
Length = 350
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -2
Query: 483 PPADKRVFLSKFHTPAPLADRFGLPPICF 397
PP F KF P + D GLP CF
Sbjct: 108 PPHKVEEFWQKFRPPGTMMDSMGLPFSCF 136
>04_03_0280 + 13854758-13855585
Length = 275
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -3
Query: 389 SRAAFAFLLDQSNLPPKFEVSPAGPKTLVPYACPSNL 279
S F ++D+S L P+ + A P +VP+ C L
Sbjct: 144 SGGRFVVIVDESKLVPRLGCTGAVPVEVVPFGCDHTL 180
>08_02_1426 +
27009720-27010787,27011846-27012517,27012999-27013793,
27014914-27014943,27018095-27019987
Length = 1485
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -1
Query: 349 CLRSLRCRLPDPKPWCRMLALPTYRDRH 266
CL+ RL P W R L+ T R+RH
Sbjct: 82 CLQDYVVRLEKPSWWRRRLSCTTLRERH 109
>08_01_0800 - 7738035-7738381,7739951-7740521
Length = 305
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 5 DYTVYDKLCSRHYWCFLLPFWHAFMLKSLCHR 100
+Y V+D S HY FL+P K CH+
Sbjct: 80 EYLVFDPAESLHYEVFLIPDLPEIPTKKKCHK 111
>06_03_0606 - 22689935-22689998,22690716-22691159,22691669-22692057,
22692130-22692223,22692507-22692599,22692705-22692913,
22692999-22693833,22693948-22694038,22698069-22698892,
22699384-22700489,22701353-22701415
Length = 1403
Score = 27.5 bits (58), Expect = 8.0
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +1
Query: 340 FGGRLDWSNKNANAALDISKANRRKTKPVGKW 435
FG + DW ++ + +++ K +R +TK V W
Sbjct: 1024 FGKKQDWPVEDISTGVELPKYDRVRTKKVKDW 1055
>01_07_0021 -
40533864-40534583,40534779-40534814,40534909-40535048,
40535837-40535922,40536430-40536653,40536770-40536865,
40538766-40538833,40539945-40540055,40540799-40540955
Length = 545
Score = 27.5 bits (58), Expect = 8.0
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Frame = -3
Query: 326 PAGPKTLVPYAC-----PSNLPRSSLKNCRVYPALPNNPSSF 216
PAGP T VPY P N P ++ +P+ PN P F
Sbjct: 480 PAGPMTAVPYNSYPVFPPMNYPMVNIP--PPFPSAPNTPPGF 519
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,428,881
Number of Sequences: 37544
Number of extensions: 446670
Number of successful extensions: 1272
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1272
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1317005676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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