Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_C13
         (587 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7SYK3 Cluster: Zgc:66368; n=3; Danio rerio|Rep: Zgc:66...    36   0.53 
UniRef50_A7RVX5 Cluster: Predicted protein; n=1; Nematostella ve...    36   0.70 
UniRef50_A7PTF9 Cluster: Chromosome chr8 scaffold_29, whole geno...    33   3.7  
UniRef50_A0VW32 Cluster: Putative uncharacterized protein; n=1; ...    33   4.9  
UniRef50_Q8S1Y7 Cluster: P0482D04.7 protein; n=5; Oryza sativa|R...    33   4.9  
UniRef50_Q4TBT3 Cluster: Chromosome undetermined SCAF7089, whole...    32   8.6  
UniRef50_A6GRI3 Cluster: Putative uncharacterized protein; n=1; ...    32   8.6  
UniRef50_P39685 Cluster: Nucleoporin POM152; n=3; Saccharomyceta...    32   8.6  

>UniRef50_Q7SYK3 Cluster: Zgc:66368; n=3; Danio rerio|Rep: Zgc:66368
           - Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 458

 Score = 36.3 bits (80), Expect = 0.53
 Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
 Frame = +2

Query: 353 SRIRSIVIMKHRRKRWRQQAPDRKGSGLQWCRTGSPEISPDTST-RVAVDTTATPVKCY 526
           +R++S+   + +++RW Q+  + K   ++W  TGS +   D  T  V +D   +P KC+
Sbjct: 256 NRLKSLRRKQRKKERWVQRQQEAKDLAMKWDLTGSDDEERDGYTCAVCLDVYYSPYKCH 314


>UniRef50_A7RVX5 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 1199

 Score = 35.9 bits (79), Expect = 0.70
 Identities = 19/55 (34%), Positives = 25/55 (45%)
 Frame = +1

Query: 160 PPGTGQDASWLCRQRLPLVVTETSGSRR*RPANYLLLVDDYCEEKHCPGSIPGKE 324
           PP  G D+ +L   +L   +T T  ++  R    LL  DD  E  H PG I   E
Sbjct: 605 PPSAGSDSDYLDEVQLQRKLTATFAAQSSRDGQTLLKADDMAERPHNPGYIADSE 659


>UniRef50_A7PTF9 Cluster: Chromosome chr8 scaffold_29, whole genome
           shotgun sequence; n=9; Eukaryota|Rep: Chromosome chr8
           scaffold_29, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 261

 Score = 33.5 bits (73), Expect = 3.7
 Identities = 20/73 (27%), Positives = 34/73 (46%)
 Frame = +2

Query: 245 DGPLIIYYLSTTTARRSTAQGVFQAKNESW*QQLLISRIRSIVIMKHRRKRWRQQAPDRK 424
           D PLII +    T  R       Q +  SW  ++L+ +  +  + KH  +    +A + K
Sbjct: 172 DNPLIIRHPQGHTVPRLDEAATEQLR--SWTTEILLHQSNNASVNKHNLENGEVKAEEHK 229

Query: 425 GSGLQWCRTGSPE 463
           G   + C+T +PE
Sbjct: 230 GKVEEACKTQTPE 242


>UniRef50_A0VW32 Cluster: Putative uncharacterized protein; n=1;
           Dinoroseobacter shibae DFL 12|Rep: Putative
           uncharacterized protein - Dinoroseobacter shibae DFL 12
          Length = 394

 Score = 33.1 bits (72), Expect = 4.9
 Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
 Frame = +2

Query: 149 SSDHRQGPAKMLRGCVASGCP---SSSRRRVGPGDDGPLIIYYLSTTTAR 289
           SS+ R G A+  R C    C     S RR  GP +D P+I   LS   AR
Sbjct: 18  SSEDRPGRAERSRPCARWSCAPERGSPRRAPGPAEDRPMIDLLLSQRAAR 67


>UniRef50_Q8S1Y7 Cluster: P0482D04.7 protein; n=5; Oryza sativa|Rep:
           P0482D04.7 protein - Oryza sativa subsp. japonica (Rice)
          Length = 244

 Score = 33.1 bits (72), Expect = 4.9
 Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = +2

Query: 146 PSSDHRQGPAKMLRGCVASGCPSSSRRRVG--PGDDG 250
           PS   R  P+    GC AS   S+ RRR G  PG DG
Sbjct: 45  PSRRRRPSPSPAAMGCAASATDSAERRRPGRSPGHDG 81


>UniRef50_Q4TBT3 Cluster: Chromosome undetermined SCAF7089, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF7089,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 930

 Score = 32.3 bits (70), Expect = 8.6
 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
 Frame = -2

Query: 508 CSRVNSNPGRRVWTNLRRTCPAPLESGALP----IRCLLSPTLP 389
           C R  S P  RVW+  RRT P+   +   P     RCLLS + P
Sbjct: 551 CGRSPSTPWSRVWSPCRRTTPSNCGTSPRPSLPRSRCLLSQSQP 594


>UniRef50_A6GRI3 Cluster: Putative uncharacterized protein; n=1;
            Limnobacter sp. MED105|Rep: Putative uncharacterized
            protein - Limnobacter sp. MED105
          Length = 1678

 Score = 32.3 bits (70), Expect = 8.6
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +1

Query: 298  CPGSIPGKERVMVTATVNQQNPLN 369
            C  ++PGKE+ ++ A VNQ+N LN
Sbjct: 1313 CWRNLPGKEQALINAAVNQKNALN 1336


>UniRef50_P39685 Cluster: Nucleoporin POM152; n=3;
           Saccharomycetaceae|Rep: Nucleoporin POM152 -
           Saccharomyces cerevisiae (Baker's yeast)
          Length = 1337

 Score = 32.3 bits (70), Expect = 8.6
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = +1

Query: 250 PANYLLLVDDYCEEKHCPGSIPGKERVMVTATV 348
           P +Y L   +Y E K CPG I GK  V+VT  V
Sbjct: 584 PGSYNL---EYIESKFCPGEIVGKSNVLVTMPV 613


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 502,640,210
Number of Sequences: 1657284
Number of extensions: 10044054
Number of successful extensions: 32275
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 30927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32261
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 40658285374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)