Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_C13
         (587 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX088650-8|CAM26299.1|  567|Homo sapiens PHD finger protein 1 pr...    30   5.3  
BX088650-7|CAM26298.1|  457|Homo sapiens PHD finger protein 1 pr...    30   5.3  
BX088650-6|CAM26297.1|  227|Homo sapiens PHD finger protein 1 pr...    30   5.3  
BC008834-1|AAH08834.1|  567|Homo sapiens PHD finger protein 1 pr...    30   5.3  
AL662799-9|CAI18272.1|  567|Homo sapiens PHD finger protein 1 pr...    30   5.3  
AL662799-8|CAI18271.1|  457|Homo sapiens PHD finger protein 1 pr...    30   5.3  
AL662799-7|CAM25568.1|  227|Homo sapiens PHD finger protein 1 pr...    30   5.3  
AL050332-3|CAC38366.1|  567|Homo sapiens PHD finger protein 1 pr...    30   5.3  
AL050332-2|CAC38367.1|  457|Homo sapiens PHD finger protein 1 pr...    30   5.3  
AL021366-5|CAA16159.1|  567|Homo sapiens cICK0721Q.4.2 (PHD fing...    30   5.3  
AL021366-4|CAA16158.1|  457|Homo sapiens cICK0721Q.4.1 (PHD fing...    30   5.3  
AF052205-1|AAC13273.1|  567|Homo sapiens PHD finger protein 2 pr...    30   5.3  
AF029678-1|AAC52062.1|  457|Homo sapiens PHF1 protein.                 30   5.3  
X82209-1|CAA57693.2| 1319|Homo sapiens MN1 protein protein.            29   9.2  
EF540994-1|ABQ01232.1| 1322|Homo sapiens meningioma (disrupted i...    29   9.2  
AL390210-1|CAI17971.2| 1320|Homo sapiens meningioma (disrupted i...    29   9.2  
AL031591-1|CAI20309.2| 1320|Homo sapiens meningioma (disrupted i...    29   9.2  

>BX088650-8|CAM26299.1|  567|Homo sapiens PHD finger protein 1
           protein.
          Length = 567

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +1

Query: 154 RSP-PGTGQDASWLCRQRLPLVVTETSGSRR*RP 252
           R+P PG G+  SW+CRQ +  + T+  G+ +  P
Sbjct: 122 RAPAPGEGEGTSWVCRQCVFAIATKRGGALKKGP 155


>BX088650-7|CAM26298.1|  457|Homo sapiens PHD finger protein 1
           protein.
          Length = 457

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +1

Query: 154 RSP-PGTGQDASWLCRQRLPLVVTETSGSRR*RP 252
           R+P PG G+  SW+CRQ +  + T+  G+ +  P
Sbjct: 122 RAPAPGEGEGTSWVCRQCVFAIATKRGGALKKGP 155


>BX088650-6|CAM26297.1|  227|Homo sapiens PHD finger protein 1
           protein.
          Length = 227

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +1

Query: 154 RSP-PGTGQDASWLCRQRLPLVVTETSGSRR*RP 252
           R+P PG G+  SW+CRQ +  + T+  G+ +  P
Sbjct: 122 RAPAPGEGEGTSWVCRQCVFAIATKRGGALKKGP 155


>BC008834-1|AAH08834.1|  567|Homo sapiens PHD finger protein 1
           protein.
          Length = 567

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +1

Query: 154 RSP-PGTGQDASWLCRQRLPLVVTETSGSRR*RP 252
           R+P PG G+  SW+CRQ +  + T+  G+ +  P
Sbjct: 122 RAPAPGEGEGTSWVCRQCVFAIATKRGGALKKGP 155


>AL662799-9|CAI18272.1|  567|Homo sapiens PHD finger protein 1
           protein.
          Length = 567

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +1

Query: 154 RSP-PGTGQDASWLCRQRLPLVVTETSGSRR*RP 252
           R+P PG G+  SW+CRQ +  + T+  G+ +  P
Sbjct: 122 RAPAPGEGEGTSWVCRQCVFAIATKRGGALKKGP 155


>AL662799-8|CAI18271.1|  457|Homo sapiens PHD finger protein 1
           protein.
          Length = 457

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +1

Query: 154 RSP-PGTGQDASWLCRQRLPLVVTETSGSRR*RP 252
           R+P PG G+  SW+CRQ +  + T+  G+ +  P
Sbjct: 122 RAPAPGEGEGTSWVCRQCVFAIATKRGGALKKGP 155


>AL662799-7|CAM25568.1|  227|Homo sapiens PHD finger protein 1
           protein.
          Length = 227

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +1

Query: 154 RSP-PGTGQDASWLCRQRLPLVVTETSGSRR*RP 252
           R+P PG G+  SW+CRQ +  + T+  G+ +  P
Sbjct: 122 RAPAPGEGEGTSWVCRQCVFAIATKRGGALKKGP 155


>AL050332-3|CAC38366.1|  567|Homo sapiens PHD finger protein 1
           protein.
          Length = 567

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +1

Query: 154 RSP-PGTGQDASWLCRQRLPLVVTETSGSRR*RP 252
           R+P PG G+  SW+CRQ +  + T+  G+ +  P
Sbjct: 122 RAPAPGEGEGTSWVCRQCVFAIATKRGGALKKGP 155


>AL050332-2|CAC38367.1|  457|Homo sapiens PHD finger protein 1
           protein.
          Length = 457

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +1

Query: 154 RSP-PGTGQDASWLCRQRLPLVVTETSGSRR*RP 252
           R+P PG G+  SW+CRQ +  + T+  G+ +  P
Sbjct: 122 RAPAPGEGEGTSWVCRQCVFAIATKRGGALKKGP 155


>AL021366-5|CAA16159.1|  567|Homo sapiens cICK0721Q.4.2 (PHD finger
           protein 2 (variant 2)) protein.
          Length = 567

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +1

Query: 154 RSP-PGTGQDASWLCRQRLPLVVTETSGSRR*RP 252
           R+P PG G+  SW+CRQ +  + T+  G+ +  P
Sbjct: 122 RAPAPGEGEGTSWVCRQCVFAIATKRGGALKKGP 155


>AL021366-4|CAA16158.1|  457|Homo sapiens cICK0721Q.4.1 (PHD finger
           protein 2 (variant 1)) protein.
          Length = 457

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +1

Query: 154 RSP-PGTGQDASWLCRQRLPLVVTETSGSRR*RP 252
           R+P PG G+  SW+CRQ +  + T+  G+ +  P
Sbjct: 122 RAPAPGEGEGTSWVCRQCVFAIATKRGGALKKGP 155


>AF052205-1|AAC13273.1|  567|Homo sapiens PHD finger protein 2
           protein.
          Length = 567

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +1

Query: 154 RSP-PGTGQDASWLCRQRLPLVVTETSGSRR*RP 252
           R+P PG G+  SW+CRQ +  + T+  G+ +  P
Sbjct: 122 RAPAPGEGEGTSWVCRQCVFAIATKRGGALKKGP 155


>AF029678-1|AAC52062.1|  457|Homo sapiens PHF1 protein.
          Length = 457

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +1

Query: 154 RSP-PGTGQDASWLCRQRLPLVVTETSGSRR*RP 252
           R+P PG G+  SW+CRQ +  + T+  G+ +  P
Sbjct: 122 RAPAPGEGEGTSWVCRQCVFAIATKRGGALKKGP 155


>X82209-1|CAA57693.2| 1319|Homo sapiens MN1 protein protein.
          Length = 1319

 Score = 29.5 bits (63), Expect = 9.2
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +2

Query: 143  SPSSDHRQGPAKMLRGCVASGCPSSSRRRVGPGDDGP 253
            S SSD+ Q   K  R  + +G P    R VG G+ GP
Sbjct: 1059 SSSSDNPQALVKASRSPLVTGSPKLPPRGVGAGEHGP 1095


>EF540994-1|ABQ01232.1| 1322|Homo sapiens meningioma (disrupted in
            balanced translocation) 1 protein.
          Length = 1322

 Score = 29.5 bits (63), Expect = 9.2
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +2

Query: 143  SPSSDHRQGPAKMLRGCVASGCPSSSRRRVGPGDDGP 253
            S SSD+ Q   K  R  + +G P    R VG G+ GP
Sbjct: 1062 SSSSDNPQALVKASRSPLVTGSPKLPPRGVGAGEHGP 1098


>AL390210-1|CAI17971.2| 1320|Homo sapiens meningioma (disrupted in
            balanced translocation) 1 protein.
          Length = 1320

 Score = 29.5 bits (63), Expect = 9.2
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +2

Query: 143  SPSSDHRQGPAKMLRGCVASGCPSSSRRRVGPGDDGP 253
            S SSD+ Q   K  R  + +G P    R VG G+ GP
Sbjct: 1060 SSSSDNPQALVKASRSPLVTGSPKLPPRGVGAGEHGP 1096


>AL031591-1|CAI20309.2| 1320|Homo sapiens meningioma (disrupted in
            balanced translocation) 1 protein.
          Length = 1320

 Score = 29.5 bits (63), Expect = 9.2
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +2

Query: 143  SPSSDHRQGPAKMLRGCVASGCPSSSRRRVGPGDDGP 253
            S SSD+ Q   K  R  + +G P    R VG G+ GP
Sbjct: 1060 SSSSDNPQALVKASRSPLVTGSPKLPPRGVGAGEHGP 1096


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,389,356
Number of Sequences: 237096
Number of extensions: 1723784
Number of successful extensions: 5160
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5160
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6155099854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)