Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_C11
         (447 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    24   0.75 
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           21   4.0  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   5.3  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 23.8 bits (49), Expect = 0.75
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -1

Query: 303 YLLSVYDEVSIYGLNGTLETTVSRIILEKVDHVVKTNER 187
           YL+  Y  +   G+      T + +IL++V+HV K  E+
Sbjct: 156 YLIFSYCPIVTTGIIKIQFATCAHLILQRVNHVKKILEK 194


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -2

Query: 419 PSEQKLYQCLWNTPVDSTTYSAPA*PH 339
           P + + YQ L  TP  S   S+P   H
Sbjct: 181 PDQYQSYQILLPTPTCSEASSSPTPSH 207


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 205 YMVYLFQYDSTHG 243
           ++V LFQY   HG
Sbjct: 378 FLVILFQYGGIHG 390


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,683
Number of Sequences: 336
Number of extensions: 2227
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10090848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)