Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_C11
         (447 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    22   2.7  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   6.1  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   8.1  

>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +1

Query: 289 NGKKIAVFSERDPHAIPWGQAGAEYVVESTG 381
           N KK+      +PH IP  Q  +E++ ++TG
Sbjct: 262 NFKKMQEEKIFEPHRIPQLQEVSEFLKKNTG 292


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = -2

Query: 440 YFSWLHPPSEQKLYQCLWNTPVD 372
           ++S  +PP  +   + LWN   D
Sbjct: 22  FYSASYPPQNRSQEEDLWNLATD 44


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -2

Query: 428 LHPPSEQKLYQC 393
           LHPP++  +Y C
Sbjct: 525 LHPPADLVVYAC 536


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,240
Number of Sequences: 438
Number of extensions: 2702
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11697255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)