Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_C11
(447 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g16300.1 68414.m01951 glyceraldehyde 3-phosphate dehydrogenas... 132 1e-31
At1g79530.1 68414.m09271 glyceraldehyde 3-phosphate dehydrogenas... 129 7e-31
At1g13440.1 68414.m01570 glyceraldehyde 3-phosphate dehydrogenas... 111 2e-25
At3g04120.1 68416.m00436 glyceraldehyde-3-phosphate dehydrogenas... 110 4e-25
At1g42970.1 68414.m04947 glyceraldehyde-3-phosphate dehydrogenas... 83 6e-17
At1g12900.1 68414.m01498 glyceraldehyde 3-phosphate dehydrogenas... 82 2e-16
At3g26650.1 68416.m03330 glyceraldehyde 3-phosphate dehydrogenas... 76 1e-14
At3g03910.1 68416.m00405 glutamate dehydrogenase, putative simil... 32 0.15
At4g15420.1 68417.m02359 PRLI-interacting factor K nearly identi... 31 0.47
At5g18170.1 68418.m02133 glutamate dehydrogenase 1 (GDH1) identi... 29 1.1
At5g07920.1 68418.m00916 diacylglycerol kinase 1 (DGK1) identica... 27 5.8
At5g07440.1 68418.m00851 glutamate dehydrogenase 2 (GDH2) identi... 27 5.8
At5g09420.1 68418.m01091 chloroplast outer membrane translocon s... 27 7.6
At4g13660.1 68417.m02124 pinoresinol-lariciresinol reductase, pu... 27 7.6
>At1g16300.1 68414.m01951 glyceraldehyde 3-phosphate dehydrogenase,
cytosolic, putative / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase, putative
similar to glyceraldehyde-3-phosphate dehydrogenase
[Pinus sylvestris] GI:1100223; contains Pfam profiles
PF02800: Glyceraldehyde 3-phosphate dehydrogenase
C-terminal domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 420
Score = 132 bits (319), Expect = 1e-31
Identities = 61/100 (61%), Positives = 76/100 (76%), Gaps = 2/100 (2%)
Frame = +1
Query: 94 SKIGINGFGRIGRLVLR-ASIDKGADVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAV 270
+K+GINGFGRIGRLVLR A+ +VVA+NDPFI YM Y+F+YDSTHG +KGT+ +
Sbjct: 85 TKVGINGFGRIGRLVLRIATFRDDIEVVAVNDPFIDAKYMAYMFKYDSTHGNYKGTINVI 144
Query: 271 -DGHLVVNGKKIAVFSERDPHAIPWGQAGAEYVVESTGVF 387
D L +NGK++ V S+RDP IPW GAEYVVES+GVF
Sbjct: 145 DDSTLEINGKQVKVVSKRDPAEIPWADLGAEYVVESSGVF 184
>At1g79530.1 68414.m09271 glyceraldehyde 3-phosphate dehydrogenase,
cytosolic, putative / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase, putative
similar to glyceraldehyde-3-phosphate dehydrogenase
[Pinus sylvestris] GI:1100223; contains Pfam profiles
PF02800: Glyceraldehyde 3-phosphate dehydrogenase
C-terminal domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 422
Score = 129 bits (312), Expect = 7e-31
Identities = 59/100 (59%), Positives = 75/100 (75%), Gaps = 2/100 (2%)
Frame = +1
Query: 94 SKIGINGFGRIGRLVLRASIDKG-ADVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAV 270
+K+GINGFGRIGRLVLR + + +VVA+NDPFI YM Y+ +YDSTHG FKG++ +
Sbjct: 87 TKVGINGFGRIGRLVLRIATSRDDIEVVAVNDPFIDAKYMAYMLKYDSTHGNFKGSINVI 146
Query: 271 -DGHLVVNGKKIAVFSERDPHAIPWGQAGAEYVVESTGVF 387
D L +NGKK+ V S+RDP IPW GA+YVVES+GVF
Sbjct: 147 DDSTLEINGKKVNVVSKRDPSEIPWADLGADYVVESSGVF 186
>At1g13440.1 68414.m01570 glyceraldehyde 3-phosphate dehydrogenase,
cytosolic, putative / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase, putative very
strong similarity to SP|P25858 Glyceraldehyde
3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12)
{Arabidopsis thaliana}; contains Pfam profiles PF02800:
Glyceraldehyde 3-phosphate dehydrogenase C-terminal
domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 338
Score = 111 bits (267), Expect = 2e-25
Identities = 54/100 (54%), Positives = 71/100 (71%), Gaps = 3/100 (3%)
Frame = +1
Query: 97 KIGINGFGRIGRLVLRASIDKG-ADVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAV- 270
+IGINGFGRIGRLV R + + ++VA+NDPFI +YM Y+F+YDS HG++K V
Sbjct: 7 RIGINGFGRIGRLVARVVLQRDDVELVAVNDPFITTEYMTYMFKYDSVHGQWKHHELKVK 66
Query: 271 -DGHLVVNGKKIAVFSERDPHAIPWGQAGAEYVVESTGVF 387
D L+ K + VF R+P IPWG+AGA++VVESTGVF
Sbjct: 67 DDKTLLFGEKPVTVFGIRNPEDIPWGEAGADFVVESTGVF 106
Score = 28.7 bits (61), Expect = 1.9
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +2
Query: 389 TNTDKASAHLVGGAKK 436
T+ DKA+AHL GGAKK
Sbjct: 107 TDKDKAAAHLKGGAKK 122
>At3g04120.1 68416.m00436 glyceraldehyde-3-phosphate dehydrogenase,
cytosolic (GAPC) / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase identical to
SP|P25858 Glyceraldehyde 3-phosphate dehydrogenase,
cytosolic (EC 1.2.1.12) {Arabidopsis thaliana}
Length = 338
Score = 110 bits (265), Expect = 4e-25
Identities = 53/100 (53%), Positives = 73/100 (73%), Gaps = 3/100 (3%)
Frame = +1
Query: 97 KIGINGFGRIGRLVLRASIDKG-ADVVAINDPFIGLDYMVYLFQYDSTHGRFK-GTVEAV 270
+IGINGFGRIGRLV R + + ++VA+NDPFI +YM Y+F+YDS HG++K ++
Sbjct: 7 RIGINGFGRIGRLVARVVLQRDDVELVAVNDPFITTEYMTYMFKYDSVHGQWKHNELKIK 66
Query: 271 DGHLVVNGKK-IAVFSERDPHAIPWGQAGAEYVVESTGVF 387
D ++ G+K + VF R+P IPW +AGA+YVVESTGVF
Sbjct: 67 DEKTLLFGEKPVTVFGIRNPEDIPWAEAGADYVVESTGVF 106
Score = 28.7 bits (61), Expect = 1.9
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +2
Query: 389 TNTDKASAHLVGGAKK 436
T+ DKA+AHL GGAKK
Sbjct: 107 TDKDKAAAHLKGGAKK 122
>At1g42970.1 68414.m04947 glyceraldehyde-3-phosphate dehydrogenase
B, chloroplast (GAPB) / NADP-dependent
glyceraldehydephosphate dehydrogenase subunit B
identical to SP|P25857 Glyceraldehyde 3-phosphate
dehydrogenase B, chloroplast precursor (EC 1.2.1.13)
(NADP-dependent glyceraldehydephosphate dehydrogenase
subunit B) {Arabidopsis thaliana}
Length = 447
Score = 83.4 bits (197), Expect = 6e-17
Identities = 47/106 (44%), Positives = 61/106 (57%), Gaps = 4/106 (3%)
Frame = +1
Query: 82 TIIMSKIGINGFGRIGRLVLRA---SIDKGADVVAINDPFIGLDYMVYLFQYDSTHGRFK 252
T+ K+ INGFGRIGR LR D +VV +ND G+ +L +YDS G FK
Sbjct: 78 TVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVVLNDSG-GVKNASHLLKYDSMLGTFK 136
Query: 253 GTVEAVDGHLV-VNGKKIAVFSERDPHAIPWGQAGAEYVVESTGVF 387
V+ VD + V+GK I V S RDP +PW + G + V+E TGVF
Sbjct: 137 AEVKIVDNETISVDGKLIKVVSNRDPLKLPWAELGIDIVIEGTGVF 182
>At1g12900.1 68414.m01498 glyceraldehyde 3-phosphate dehydrogenase,
chloroplast, putative / NADP-dependent
glyceraldehydephosphate dehydrogenase, putative similar
to SP|P25856 Glyceraldehyde 3-phosphate dehydrogenase A,
chloroplast precursor (EC 1.2.1.13) (NADP-dependent
glyceraldehydephosphate dehydrogenase subunit A)
{Arabidopsis thaliana}; contains Pfam profiles PF02800:
Glyceraldehyde 3-phosphate dehydrogenase C-terminal
domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 399
Score = 81.8 bits (193), Expect = 2e-16
Identities = 47/101 (46%), Positives = 61/101 (60%), Gaps = 4/101 (3%)
Frame = +1
Query: 97 KIGINGFGRIGRLVLRA---SIDKGADVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVE- 264
K+ INGFGRIGR LR D DVV IND G+ +L +YDST G F V+
Sbjct: 66 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTG-GVKQASHLLKYDSTLGIFDADVKP 124
Query: 265 AVDGHLVVNGKKIAVFSERDPHAIPWGQAGAEYVVESTGVF 387
+ D L V+GK I + S+R+P +PWG+ G + V+E TGVF
Sbjct: 125 SGDSALSVDGKIIKIVSDRNPSNLPWGELGIDLVIEGTGVF 165
>At3g26650.1 68416.m03330 glyceraldehyde 3-phosphate dehydrogenase
A, chloroplast (GAPA) / NADP-dependent
glyceraldehydephosphate dehydrogenase subunit A
identical to SP|P25856 Glyceraldehyde 3-phosphate
dehydrogenase A, chloroplast precursor (EC 1.2.1.13)
(NADP-dependent glyceraldehydephosphate dehydrogenase
subunit A) {Arabidopsis thaliana}
Length = 396
Score = 76.2 bits (179), Expect = 1e-14
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 4/101 (3%)
Frame = +1
Query: 97 KIGINGFGRIGRLVLRA---SIDKGADVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVE- 264
K+ INGFGRIGR LR D D++AIND G+ +L +YDST G F V+
Sbjct: 63 KVAINGFGRIGRNFLRCWHGRKDSPLDIIAINDTG-GVKQASHLLKYDSTLGIFDADVKP 121
Query: 265 AVDGHLVVNGKKIAVFSERDPHAIPWGQAGAEYVVESTGVF 387
+ + + V+GK I V S R+P +PW + G + V+E TGVF
Sbjct: 122 SGETAISVDGKIIQVVSNRNPSLLPWKELGIDIVIEGTGVF 162
>At3g03910.1 68416.m00405 glutamate dehydrogenase, putative similar
to glutamate dehydrogenase 1 (GDH 1) [Arabidopsis
thaliana] SWISS-PROT:Q43314
Length = 411
Score = 32.3 bits (70), Expect = 0.15
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 64 LRKYTLTIIMSKIGINGFGRIGRLVLRASIDKGADVVAIND 186
L ++ TI + I GFG +G + DKG +VA++D
Sbjct: 197 LNEHGKTISGQRFAIQGFGNVGSWAAKLISDKGGKIVAVSD 237
>At4g15420.1 68417.m02359 PRLI-interacting factor K nearly identical
to PRLI-interacting factor K [Arabidopsis thaliana]
GI:11139266; contains Pfam profiles PF03152: Ubiquitin
fusion degradation protein UFD1, PF00096: Zinc finger,
C2H2 type
Length = 561
Score = 30.7 bits (66), Expect = 0.47
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = -1
Query: 279 VSIYGLNGTLETTVSRIILEKVDHVVKTNERII-DSNNIGTLINRSTEH 136
+ +YG GT++ VS ++ E +D K ER + S+++ T+ R+ +H
Sbjct: 361 IGVYGFKGTVKYQVSVLVQESIDG-AKVGERAVSSSSDVDTVECRNCKH 408
>At5g18170.1 68418.m02133 glutamate dehydrogenase 1 (GDH1) identical
to glutamate dehydrogenase 1 (GDH 1) [Arabidopsis
thaliana] SWISS-PROT:Q43314
Length = 411
Score = 29.5 bits (63), Expect = 1.1
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 64 LRKYTLTIIMSKIGINGFGRIGRLVLRASIDKGADVVAIND 186
L ++ TI + I GFG +G + +KG +VA++D
Sbjct: 197 LNEHGKTISGQRFVIQGFGNVGSWAAKLISEKGGKIVAVSD 237
>At5g07920.1 68418.m00916 diacylglycerol kinase 1 (DGK1) identical
to diacylglycerol kinase 1 (Diglyceride kinase 1, DGK 1,
DAG kinase 1) [Arabidopsis thaliana] SWISS-PROT:Q39017
Length = 728
Score = 27.1 bits (57), Expect = 5.8
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = -1
Query: 270 YGLNGTLETTVSRIILEKVDHVVKTNERIIDSNNIGTLINRSTEHQATDATKTVN 106
+G N T ++ I ++ + +TNE D+ N G+ + STE A D TVN
Sbjct: 244 HGANELASTALASIRIQSKKYK-QTNETSADTGNSGSNCDESTESTA-DTGPTVN 296
>At5g07440.1 68418.m00851 glutamate dehydrogenase 2 (GDH2) identical
to glutamate dehydrogenase 2 (GDH 2) [Arabidopsis
thaliana] SWISS-PROT:Q38946
Length = 411
Score = 27.1 bits (57), Expect = 5.8
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 106 INGFGRIGRLVLRASIDKGADVVAIND 186
I GFG +G + +KG VVA++D
Sbjct: 211 IQGFGNVGTWAAKLIHEKGGKVVAVSD 237
>At5g09420.1 68418.m01091 chloroplast outer membrane translocon
subunit, putative similar to component of chloroplast
outer membrane translocon Toc64 [Pisum sativum]
GI:7453538; contains Pfam profiles PF01425: Amidase,
PF00515: TPR Domain
Length = 603
Score = 26.6 bits (56), Expect = 7.6
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = -1
Query: 198 TNERIIDSNNIGTLINRSTEHQATDATKTVNSDFRH 91
T +ID N+ + R T ++ K +DFRH
Sbjct: 546 TKAMLIDKKNVKAYLRRGTARESLVRYKEAAADFRH 581
>At4g13660.1 68417.m02124 pinoresinol-lariciresinol reductase,
putative similar to pinoresinol-lariciresinol reductase
TH1 [Tsuga heterophylla][GI:7578915]; contains
isoflavone reductase domain PF02716
Length = 317
Score = 26.6 bits (56), Expect = 7.6
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +1
Query: 106 INGFGRIGRLVLRASIDKGADVVAINDPFIGLD 204
+ G G +GR ++ A + +G + + P IG+D
Sbjct: 15 VGGTGSLGRRIVSACLAEGHETYVLQRPEIGVD 47
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,085,213
Number of Sequences: 28952
Number of extensions: 202923
Number of successful extensions: 575
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 564
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 722638680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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