Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_C09
         (416 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   2.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   2.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   2.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   2.8  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   6.4  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    20   8.4  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    20   8.4  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -3

Query: 198 CICVHCVFKPVVSRENPRLRRFISQINDSF 109
           CIC       ++SR N   +RF+  I D F
Sbjct: 203 CICFVPGVLGLLSRSNKESQRFLKVIIDLF 232


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -3

Query: 198 CICVHCVFKPVVSRENPRLRRFISQINDSF 109
           CIC       ++SR N   +RF+  I D F
Sbjct: 203 CICFVPGVLGLLSRSNKESQRFLKVIIDLF 232


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -3

Query: 198 CICVHCVFKPVVSRENPRLRRFISQINDSF 109
           CIC       ++SR N   +RF+  I D F
Sbjct: 203 CICFVPGVLGLLSRSNKESQRFLKVIIDLF 232


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -3

Query: 198 CICVHCVFKPVVSRENPRLRRFISQINDSF 109
           CIC       ++SR N   +RF+  I D F
Sbjct: 203 CICFVPGVLGLLSRSNKESQRFLKVIIDLF 232


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 237 CGAKTRFDNCDI 202
           C  KT+ +NCD+
Sbjct: 87  CDWKTKVNNCDV 98


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 293 TQMHKTGPHIKKRKSRNPLNGNPFAKG 373
           TQ      +  ++ ++  +N NPFAKG
Sbjct: 173 TQFIAVTAYQNEKITKLKINYNPFAKG 199


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 234 HKYKHLVSLHISSVE 278
           +K KHLV+LH + V+
Sbjct: 228 NKIKHLVNLHKNLVK 242


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,866
Number of Sequences: 336
Number of extensions: 1691
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9174063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)