Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_C06
         (566 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    23   1.8  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    23   1.8  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    23   2.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.2  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   4.2  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   4.2  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   7.3  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   7.3  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   7.3  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    21   7.3  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    21   7.3  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   9.7  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   9.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.7  

>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 17/54 (31%), Positives = 23/54 (42%)
 Frame = +3

Query: 12  LLVLSAAILACVYAQVSMPPSYKERYPEYYKFSKQARHPRDVTWDKNIGNGKVF 173
           LLVLSA I + +  +    P     YP +    K  +   +V   K  GNG  F
Sbjct: 7   LLVLSALIYSVLGQENFKCPDDFGFYPHHTSCDKYWKCDNNVAELKTCGNGLAF 60


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 17/54 (31%), Positives = 23/54 (42%)
 Frame = +3

Query: 12  LLVLSAAILACVYAQVSMPPSYKERYPEYYKFSKQARHPRDVTWDKNIGNGKVF 173
           LLVLSA I + +  +    P     YP +    K  +   +V   K  GNG  F
Sbjct: 7   LLVLSALIYSVLGQENFKCPDDFGFYPHHTSCDKYWKCDNNVAELKTCGNGLAF 60


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 462 LVIRQLISECSCQSSTH 412
           L+I +LIS C C +S H
Sbjct: 203 LLIMRLISVCLCGASVH 219


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 7/27 (25%), Positives = 18/27 (66%)
 Frame = -2

Query: 526  LEIVLEIGPWNATSGFPRPIVLSDPPA 446
            +++++ +G WN ++G     +++DP A
Sbjct: 2392 VKVLIALGGWNDSAGNKYSRLVNDPQA 2418



 Score = 21.0 bits (42), Expect = 7.3
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +1

Query: 115  KPVTLETSRGTRT*ATEKYSV 177
            KPVT  TSR   T  ++ Y V
Sbjct: 2303 KPVTTTTSRPIGTDTSDDYKV 2323


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +1

Query: 13  YWCFLLPFWHAFMLKSLCHRVIKKGILNIINSRSK 117
           + C     W AF+        I KG+++ I SR K
Sbjct: 529 FQCLKSIAWRAFLAVLKRRTEIYKGLIDRIKSREK 563



 Score = 21.4 bits (43), Expect = 5.6
 Identities = 9/31 (29%), Positives = 19/31 (61%)
 Frame = -1

Query: 242 VIEKLPRVSSFTE*SIVILSECTEYFSVAYV 150
           V+EK+   SSF    + +L +C +Y ++ ++
Sbjct: 73  VVEKILTQSSFECIHLSVLHKCYDYDAIPWL 103


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -3

Query: 84  FLYNSVA*RLEHKRMPKWQQKAPIMSTA 1
           FL++ +   L   R PKWQ +  I++ A
Sbjct: 106 FLHSWLGTGLLTSRGPKWQNRRKILTPA 133


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -3

Query: 108 RIYNIQDTFLYNSVA 64
           +IYNIQ+ F Y++ +
Sbjct: 57  KIYNIQNNFEYDTAS 71


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = +1

Query: 208 VKLDTRGSFSMTIAVSWKGKHTA 276
           + LDT+ S+++T+A +  G+  A
Sbjct: 142 LNLDTKESYALTVAETADGRLNA 164


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = +3

Query: 81  ERYPEYYKFSKQARHPRDVTWDKNIG 158
           +RY  YY F       RDV   K IG
Sbjct: 25  DRYVGYYHFMTPTLLLRDVELIKQIG 50


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 550 SLKTTTSALEIVLEIGPWNATS 485
           SLK     ++I+L +G WN  S
Sbjct: 86  SLKEKNPNVKILLSMGGWNEGS 107


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 550 SLKTTTSALEIVLEIGPWNATS 485
           SLK     ++I+L +G WN  S
Sbjct: 86  SLKEKNPNVKILLSMGGWNEGS 107


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 15/70 (21%), Positives = 26/70 (37%)
 Frame = +3

Query: 225 RQFFNDDRGKLEGQAYGTRVLGPAGDTSNFGGRLDWSNKNANAALDISKQIGGRPNLSAS 404
           ++F    R    G  Y  +  GP  D+ N   R     K + ++     +   RP  S  
Sbjct: 6   QEFGKRGRSTGRGLKYSGQQHGPQSDSRNQQLRTGEKRKRSTSSQSTEGENDARPRASQV 65

Query: 405 GAGVWNFDKN 434
              V++  K+
Sbjct: 66  KLNVFSIIKS 75


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -2

Query: 322 LPPKFEVSPAGPKTLV 275
           LPP F + P G   LV
Sbjct: 189 LPPSFGIFPGGAPPLV 204


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 11  IIGAFCCHFGMRLCSSLY 64
           ++GAF   FG+   SS Y
Sbjct: 904 LVGAFVAAFGLDQWSSFY 921


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 11  IIGAFCCHFGMRLCSSLY 64
           ++GAF   FG+   SS Y
Sbjct: 904 LVGAFVAAFGLDQWSSFY 921


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,727
Number of Sequences: 336
Number of extensions: 3704
Number of successful extensions: 17
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)