Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_C06
(566 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0518 - 19937507-19938481,19938805-19939151,19939246-19939387 32 0.37
12_02_0625 - 21331209-21331273,21331364-21331555,21332348-213325... 31 0.64
11_06_0295 + 22033367-22034947,22035030-22035137,22035230-220353... 31 0.85
02_04_0376 - 22474473-22476947 30 1.5
04_04_1036 + 30305548-30305588,30305710-30305761,30306408-303064... 29 2.0
07_03_1157 - 24419157-24419948 29 2.6
07_03_1155 - 24413270-24413728 29 2.6
04_04_0294 + 24204563-24204748,24205531-24205620,24205980-242062... 29 2.6
03_01_0084 + 676538-676669,677828-677959,678085-678210,678820-67... 29 2.6
05_04_0374 - 20736615-20737037,20737148-20737639,20738145-207384... 29 3.4
11_06_0634 - 25685216-25685329,25685407-25685511,25685681-256857... 28 4.5
09_06_0344 - 22419152-22419250,22419460-22419554,22419952-224201... 28 4.5
06_03_0961 + 26331266-26332151,26332244-26332393,26332761-26333281 28 4.5
06_01_0682 + 5002036-5002573,5002875-5002966 28 4.5
11_01_0770 - 6447739-6448158 28 6.0
07_03_1425 + 26489446-26491425 28 6.0
06_01_0738 + 5458182-5458374,5460512-5461766,5461861-5462053,546... 28 6.0
04_03_0280 + 13854758-13855585 28 6.0
08_02_1426 + 27009720-27010787,27011846-27012517,27012999-270137... 27 7.9
06_01_0267 - 1972988-1973148,1973275-1973403,1973881-1974024,197... 27 7.9
01_07_0021 - 40533864-40534583,40534779-40534814,40534909-405350... 27 7.9
>12_02_0518 - 19937507-19938481,19938805-19939151,19939246-19939387
Length = 487
Score = 31.9 bits (69), Expect = 0.37
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 6/116 (5%)
Frame = +3
Query: 222 TRQFFNDDRGKLEGQAYGTRVLGPAGDTSN---FGGRLDWSNKNANA---ALDISKQIGG 383
T QFF G YG RVL AG SN G + + A++ A+ ++ ++G
Sbjct: 286 TLQFFQQASGIDSVVLYGPRVLAAAGVASNTLLLGLNVVFGVAKASSILVAMALTDRVGR 345
Query: 384 RPNLSASGAGVWNFDKNTRLSAGGSLSTMGRGKPDVAFQGPISSTISKADVVVFKL 551
RP L AS G+ + L+ G + G + D A + + A V F +
Sbjct: 346 RPLLLASTGGM----TASLLALGSVFAAFGGARDDAAVAAGAAVAVVVAFVCAFSV 397
>12_02_0625 -
21331209-21331273,21331364-21331555,21332348-21332558,
21333600-21333700,21333839-21333844,21333956-21334051,
21334485-21334497
Length = 227
Score = 31.1 bits (67), Expect = 0.64
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = -1
Query: 422 VPHTGSTCRQVWSSAYLLADIKGSVCILIRPIQP 321
VP TG+ +W SA+L AD+ GS +IRP +P
Sbjct: 25 VPATGALRVWIWDSAHLQADLLGSP--VIRPSEP 56
>11_06_0295 +
22033367-22034947,22035030-22035137,22035230-22035370,
22035576-22035625,22036100-22036168,22036649-22036781,
22037634-22037747,22037826-22038038,22038387-22038500,
22038768-22038900,22039304-22039416,22040204-22040284,
22040397-22040483
Length = 978
Score = 30.7 bits (66), Expect = 0.85
Identities = 21/65 (32%), Positives = 34/65 (52%)
Frame = +1
Query: 97 IINSRSKPVTLETSRGTRT*ATEKYSVHSDKMTMDYSVKLDTRGSFSMTIAVSWKGKHTA 276
+IN + L + T+ E SV D++ DY+ K+D R SF+M+ + + KH +
Sbjct: 337 LINKIVRTANLYWNSMTQEQRGEFLSVRFDELQEDYN-KVD-RSSFTMSDVLRFGEKHNS 394
Query: 277 PGFWV 291
FWV
Sbjct: 395 YRFWV 399
>02_04_0376 - 22474473-22476947
Length = 824
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = -2
Query: 301 SPAGPKTLVPYACPSNLPRS-SLKNCRVYPALPNNPSSFCPSVPNTFPLPM 152
SPA P++ P A ++L + + + P+LP P+ PS+P + P+P+
Sbjct: 4 SPALPRSTNPAALLAHLAAVLTSPDWFLNPSLPRLPALLTPSLPESLPVPL 54
>04_04_1036 +
30305548-30305588,30305710-30305761,30306408-30306487,
30307035-30307110,30307169-30307252,30307356-30307501,
30307608-30307826,30308180-30308271,30308677-30308867,
30309100-30309706,30309811-30310004
Length = 593
Score = 29.5 bits (63), Expect = 2.0
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
Frame = +3
Query: 276 TRVLGPAGDTSNFGGRLDWSNKNANAALDIS-KQIGGRPNLSASGAGVWNFDK-NTRLSA 449
T + P D S+FG + S + A D+S GR N + A + K N ++ +
Sbjct: 452 TPLADPKADASDFGAFVSHSEEVAKDPFDLSLSTSSGRTNQAPLAAPKSDTKKENFQVKS 511
Query: 450 GGSLSTMGRGKPDVAFQGPISSTISKADVV 539
G ++ RG D+ GP ++ +V
Sbjct: 512 GIWADSLSRGLIDLNITGPKKVNLADVGIV 541
>07_03_1157 - 24419157-24419948
Length = 263
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = -2
Query: 316 PKFEVSPAGPKTLVPYACPSNLPRSSLKNCRVYPALPNNPSSFCPSVP 173
P V P PK VP+A LP+ L P LP + P VP
Sbjct: 168 PPHPVVPELPKPEVPHAAVPELPKPELPPHPAVPELPKHEEPPHPVVP 215
>07_03_1155 - 24413270-24413728
Length = 152
Score = 29.1 bits (62), Expect = 2.6
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = -2
Query: 322 LPPKFEVSPAGPKTLVPYACPSNLPRSSLKNCRVYPALPNNPSSFCPSVPNTFPLPMFLS 143
LPP E+ P PK +P P LPR + +PA+P P P +P +P L
Sbjct: 44 LPPHPEL-PELPKPELPPPLPE-LPRPVVPELPPHPAVPELPPLPKPELPPHPVVPEMLP 101
Query: 142 H 140
H
Sbjct: 102 H 102
Score = 29.1 bits (62), Expect = 2.6
Identities = 25/89 (28%), Positives = 32/89 (35%), Gaps = 1/89 (1%)
Frame = -2
Query: 418 HTPAPLADRFGLPPICLLISRAAFAFLLDQSNLPPKFEVSPAGPKTLVPY-ACPSNLPRS 242
H P + LPP + R L +P E+ P L P+ P LP
Sbjct: 47 HPELPELPKPELPPPLPELPRPVVPELPPHPAVP---ELPPLPKPELPPHPVVPEMLPHP 103
Query: 241 SLKNCRVYPALPNNPSSFCPSVPNTFPLP 155
+ YPA+P P P P PLP
Sbjct: 104 VVPELPHYPAVPGFPKHGLPPKPELPPLP 132
>04_04_0294 +
24204563-24204748,24205531-24205620,24205980-24206211,
24207180-24207457,24207576-24207647,24208054-24208295,
24208781-24209197,24209296-24209497,24209624-24209738,
24209821-24209906,24210235-24210354,24210431-24210519,
24210588-24210669,24211072-24211263,24211546-24211668
Length = 841
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 57 VSMPPSYKERYPEYYKFSKQARHPRDVTWDKNIGNGKV 170
+++P S + +Y K Q + PR + W KN+G K+
Sbjct: 644 LTVPASVDQLLSDYAKRFHQIKTPRKLLWKKNLGTVKL 681
>03_01_0084 +
676538-676669,677828-677959,678085-678210,678820-678882,
678964-679061,679133-679340,679859-679930,680016-680108,
680297-680398,680568-680665,681059-681140,681274-681362,
681960-682065,682145-682210,682527-682633,682907-683027,
683226-683411,683490-683789,683887-683967,684061-684225,
684297-684383,684476-684601,684750-684830,684917-684988,
685353-685364
Length = 934
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = -1
Query: 287 QNPGAVCLPFQLTAIVIEKLPRVSSFTE*SIVILSECTEYFSVA 156
+ PG C P +L AI+ +KLP VS + + I EYF ++
Sbjct: 504 RRPG--CSPKELFAIINDKLPTVSYESYIDVEIQQRAVEYFELS 545
>05_04_0374 -
20736615-20737037,20737148-20737639,20738145-20738422,
20738576-20738732
Length = 449
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = -2
Query: 310 FEVSPAGPKTLVPYACPSNLPRSSLKNCRVYPALPNNPSSFCPSVPNT 167
F+ S GP+ Y P N + ++P LPN +S P +P++
Sbjct: 154 FKKSGLGPRIGEQYGAPFNEEEWEHADAEMFPLLPNVETSVFPLLPSS 201
>11_06_0634 -
25685216-25685329,25685407-25685511,25685681-25685740,
25685827-25685965,25686056-25686240,25686328-25686411,
25686499-25686621,25687088-25687267,25687364-25687433,
25687520-25687616,25687695-25687770,25688259-25688348,
25688383-25688529,25688647-25688715,25689004-25689177,
25689266-25689336,25689409-25689557,25690723-25690774,
25690865-25691120,25691196-25691287,25691420-25691541,
25691909-25692679,25692883-25692940,25693068-25693107,
25694462-25694595,25694685-25694793,25694896-25694991
Length = 1220
Score = 28.3 bits (60), Expect = 4.5
Identities = 18/57 (31%), Positives = 23/57 (40%)
Frame = +3
Query: 69 PSYKERYPEYYKFSKQARHPRDVTWDKNIGNGKVFGTLGQNDDGLFGKAGYTRQFFN 239
PSY R F + V +DK I +G G L + D G F A R F+
Sbjct: 579 PSYGYRGRVMLAFEENGSSKIGVRFDKQIPDGNDLGGLCEEDHGFFCSADLLRPDFS 635
>09_06_0344 -
22419152-22419250,22419460-22419554,22419952-22420108,
22420825-22420869,22421080-22421211,22421496-22421594,
22421690-22421785,22421968-22422149,22422242-22422494,
22422867-22422974,22423037-22423094,22423462-22423613,
22423698-22423792,22424172-22424287,22424369-22424495,
22424565-22424661,22424745-22424913,22425879-22426027
Length = 742
Score = 28.3 bits (60), Expect = 4.5
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 8/55 (14%)
Frame = -2
Query: 406 PLADRFGLPPICLLISRAAFAFLL--------DQSNLPPKFEVSPAGPKTLVPYA 266
PL+ +G P+C L++ F FLL D S+L P +V+P L+ +A
Sbjct: 9 PLSGAYGEGPLCYLLAVDGFRFLLDCGWTDLCDPSHLQPLAKVAPTIDAVLLSHA 63
>06_03_0961 + 26331266-26332151,26332244-26332393,26332761-26333281
Length = 518
Score = 28.3 bits (60), Expect = 4.5
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +3
Query: 330 WSNKNANAALDISKQIGGRPNLSASGAGVW-NFDKNT-RLSAGGS 458
WSN N+N+ + IG N + S +G W N NT LS GS
Sbjct: 416 WSNSNSNSGSTMPSGIGVASN-AGSSSGSWSNAGSNTGTLSGAGS 459
>06_01_0682 + 5002036-5002573,5002875-5002966
Length = 209
Score = 28.3 bits (60), Expect = 4.5
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = -2
Query: 454 PPADKRVFLSKFHTPAPLADRFGLPPICLLISRAAFAFLLDQSNLPPKFEVSPAGPKTLV 275
P + KR++L ++TP A F ICL A +S PP P+ ++
Sbjct: 34 PNSRKRIWLGSYYTPEKAARAFDAAFICLRGGEAIAGLNFTES--PPAVVARTTDPREVL 91
Query: 274 PYA 266
+A
Sbjct: 92 AFA 94
>11_01_0770 - 6447739-6448158
Length = 139
Score = 27.9 bits (59), Expect = 6.0
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +3
Query: 165 KVFGTLGQNDDGLFGKAGYTRQFFND--DRGKLEGQAYGTRVLGPAGDTSNFGGRLDWSN 338
K+ G G D G + RQ+ +D + G G+ R G G+ GR+ WS
Sbjct: 4 KLVGEDGDGGDEDGGDDRWWRQWGSDLVEDGVGGGEDRWRRWRGTVGEDGGTAGRISWSR 63
Query: 339 KNANAA 356
+ A A+
Sbjct: 64 RTARAS 69
>07_03_1425 + 26489446-26491425
Length = 659
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -2
Query: 313 KFEVSPAGPKTLVPYACPSNLPRSSLKNCRVYPALPN 203
+F + A ++VPY P P SSL+ RVY P+
Sbjct: 312 RFRGAGARGDSVVPYLQPVQSPVSSLRMLRVYGTFPS 348
>06_01_0738 +
5458182-5458374,5460512-5461766,5461861-5462053,
5462151-5462344,5462443-5462601,5462683-5463025
Length = 778
Score = 27.9 bits (59), Expect = 6.0
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Frame = +3
Query: 300 DTSNFGGRL-DWSNKNANAALDISKQIGGRPNLSASGAGVWNFDKNTRLSA----GGSLS 464
DT+ G + SN+ A+ A+ ++K+ GG P+ + + N + SA GGS
Sbjct: 306 DTNKASGNVASTSNQTASTAM-VAKKAGGSPSKNQTSVASTNSKNQNQTSAGVASGGSSG 364
Query: 465 TMGRGKPDVAFQGPISST 518
T + + + QG + S+
Sbjct: 365 TTSK-QEETTSQGSVGSS 381
>04_03_0280 + 13854758-13855585
Length = 275
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -2
Query: 361 SRAAFAFLLDQSNLPPKFEVSPAGPKTLVPYACPSNL 251
S F ++D+S L P+ + A P +VP+ C L
Sbjct: 144 SGGRFVVIVDESKLVPRLGCTGAVPVEVVPFGCDHTL 180
>08_02_1426 +
27009720-27010787,27011846-27012517,27012999-27013793,
27014914-27014943,27018095-27019987
Length = 1485
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 321 CLRSLRCRLPDPKPWCRMLALPTYRDRH 238
CL+ RL P W R L+ T R+RH
Sbjct: 82 CLQDYVVRLEKPSWWRRRLSCTTLRERH 109
>06_01_0267 -
1972988-1973148,1973275-1973403,1973881-1974024,
1974368-1974493,1974595-1974720,1975149-1975241,
1975465-1975606,1976747-1976878,1976943-1977080,
1977431-1977523,1978186-1978389,1978568-1978656,
1978839-1978988,1979088-1979253,1979355-1979576,
1979687-1979872,1980289-1980411,1980511-1980611,
1982005-1982155
Length = 891
Score = 27.5 bits (58), Expect = 7.9
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +3
Query: 333 SNKNANAALDISKQIGGRPNLSASGAGVWNFDKNTRLSAGGSLSTMGRGKPDVAFQGPIS 512
S K ANA K G+P LSA+G G + R ++ G L + G G + + +S
Sbjct: 2 SGKVANAT---PKAAAGKPRLSAAGGGAY------RRTSSGPLPSAGGGGGRASSESGVS 52
Query: 513 STISKA 530
S + A
Sbjct: 53 SRVRVA 58
>01_07_0021 -
40533864-40534583,40534779-40534814,40534909-40535048,
40535837-40535922,40536430-40536653,40536770-40536865,
40538766-40538833,40539945-40540055,40540799-40540955
Length = 545
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Frame = -2
Query: 298 PAGPKTLVPYAC-----PSNLPRSSLKNCRVYPALPNNPSSF 188
PAGP T VPY P N P ++ +P+ PN P F
Sbjct: 480 PAGPMTAVPYNSYPVFPPMNYPMVNIP--PPFPSAPNTPPGF 519
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,102,370
Number of Sequences: 37544
Number of extensions: 445026
Number of successful extensions: 1299
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1299
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1305140760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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