Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_C05
         (597 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81525-2|CAB04255.2|   99|Caenorhabditis elegans Hypothetical pr...    39   0.002
Z68315-6|CAA92671.1|  219|Caenorhabditis elegans Hypothetical pr...    29   2.5  
U00045-3|AAL02502.1|  868|Caenorhabditis elegans Temporarily ass...    29   3.3  
AF026205-2|AAB71255.3|   86|Caenorhabditis elegans Neuropeptide-...    29   3.3  
U29377-10|AAA68717.1|  140|Caenorhabditis elegans Hypothetical p...    28   4.4  
AL110477-20|CAB76740.3|  728|Caenorhabditis elegans Hypothetical...    28   4.4  
AF039050-7|ABC71842.1|  516|Caenorhabditis elegans Cytochrome p4...    27   7.7  
AF039050-6|AAC47939.2|  499|Caenorhabditis elegans Cytochrome p4...    27   7.7  
AF039050-4|AAC47937.1|  499|Caenorhabditis elegans Cytochrome p4...    27   7.7  

>Z81525-2|CAB04255.2|   99|Caenorhabditis elegans Hypothetical
           protein F33A8.2 protein.
          Length = 99

 Score = 39.1 bits (87), Expect = 0.002
 Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
 Frame = +2

Query: 386 VKRARPY-SFGLGKRIADEDLSE-EKRARMYDFGLGKRLPMYNFGLGKRAYSYNFGLGKR 559
           V +  PY +F   KR  +E+L   EKRAR   +G  KR P   F   KRA  Y F   KR
Sbjct: 36  VDKRSPYRAFAFAKRSDEENLDFLEKRAR---YGFAKRSPYRTFAFAKRASPYGFAFAKR 92


>Z68315-6|CAA92671.1|  219|Caenorhabditis elegans Hypothetical
           protein F28C6.5 protein.
          Length = 219

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = -3

Query: 553 PESEVVAVGALAETEVVHGKPLAQPEVVHPSAL 455
           PE + V    L E E +HG+PL  PE++ PS L
Sbjct: 84  PEPQDVVAVPLDE-EALHGEPLFPPELILPSEL 115


>U00045-3|AAL02502.1|  868|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 204, isoform b protein.
          Length = 868

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +2

Query: 275 GKRSVDDELGAEDLPNETDPPALSELFDE 361
           G+R+ D E+    +P+ + P +  ELFDE
Sbjct: 41  GQRAADVEMMTSSVPSSSQPSSFVELFDE 69


>AF026205-2|AAB71255.3|   86|Caenorhabditis elegans
           Neuropeptide-like protein protein 6 protein.
          Length = 86

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 10/57 (17%)
 Frame = +2

Query: 170 FGLGKRAYSYVSEY------KRLPVYNF--GLGKRS--RPYSFGLGKRSVDDELGAE 310
           FG GKR+ + +S+       KR    +F  G GKR+  R ++ G GKRS + ++  +
Sbjct: 28  FGFGKRSMADISDMPEDVPMKRYKPRSFAMGFGKRAAMRSFNMGFGKRSAEPQIDVD 84


>U29377-10|AAA68717.1|  140|Caenorhabditis elegans Hypothetical
           protein K05F1.10 protein.
          Length = 140

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 15/68 (22%), Positives = 27/68 (39%)
 Frame = -2

Query: 380 ILRYHHTRRRVQRELVGPSRWGDPRHRAHRPPTVCPDRTSKDVIVSQGRSYKREVFCIQR 201
           +  +HH +RR+            PRHR   P T        +    + + ++  + C   
Sbjct: 17  LFHHHHNKRRIL-----------PRHRVRSPATRTRIHVRSERKAEECQKHEHHLICGPE 65

Query: 200 RNCRRACQ 177
           R+C R C+
Sbjct: 66  RHCDRTCE 73


>AL110477-20|CAB76740.3|  728|Caenorhabditis elegans Hypothetical
           protein Y113G7B.18 protein.
          Length = 728

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 379 SCGIIILVEEFRESWWVRLVGEILGTELIVH 287
           +CG +  + E RE W VR VG+ +  +L  H
Sbjct: 273 NCGFLRELREMREIWRVRKVGDYICGDLSYH 303


>AF039050-7|ABC71842.1|  516|Caenorhabditis elegans Cytochrome p450
           family protein34A9, isoform b protein.
          Length = 516

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 407 SFGLGKRIADEDLSEEKRARMYDF 478
           +FGLG+ I ++ + EE R R  DF
Sbjct: 134 NFGLGRNIMEDKIMEEYRYRFKDF 157


>AF039050-6|AAC47939.2|  499|Caenorhabditis elegans Cytochrome p450
           family protein34A9, isoform a protein.
          Length = 499

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 407 SFGLGKRIADEDLSEEKRARMYDF 478
           +FGLG+ I ++ + EE R R  DF
Sbjct: 134 NFGLGRNIMEDKIMEEYRYRFKDF 157


>AF039050-4|AAC47937.1|  499|Caenorhabditis elegans Cytochrome p450
           family protein 34A7 protein.
          Length = 499

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 407 SFGLGKRIADEDLSEEKRARMYDF 478
           +FGLG+ I ++ + EE R R  DF
Sbjct: 134 NFGLGRNIIEDKIMEEYRYRFEDF 157


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,904,285
Number of Sequences: 27780
Number of extensions: 237790
Number of successful extensions: 896
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)