Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_C05
(597 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g25580.1 68417.m03686 stress-responsive protein-related conta... 33 0.14
At4g00260.1 68417.m00033 transcriptional factor B3 family protei... 31 0.77
At2g45000.1 68415.m05603 expressed protein contains Pfam profile... 30 1.0
At4g05200.1 68417.m00783 protein kinase family protein contains ... 30 1.3
At3g17160.1 68416.m02189 expressed protein 30 1.3
At5g19460.1 68418.m02319 MutT/nudix family protein similar to SP... 29 1.8
At5g60010.1 68418.m07525 ferric reductase-like transmembrane com... 29 2.4
At3g45810.1 68416.m04958 ferric reductase-like transmembrane com... 29 2.4
At2g46240.1 68415.m05750 IQ domain-containing protein / BAG doma... 29 2.4
At1g44030.1 68414.m05079 DC1 domain-containing protein contains ... 29 3.1
At1g13280.1 68414.m01542 allene oxide cyclase family protein sim... 28 4.1
At1g51470.1 68414.m05793 glycosyl hydrolase family 1 protein con... 27 7.2
At5g61960.1 68418.m07777 RNA recognition motif (RRM)-containing ... 27 9.5
At5g01190.1 68418.m00024 laccase, putative / diphenol oxidase, p... 27 9.5
At3g05570.1 68416.m00617 expressed protein 27 9.5
At1g47600.1 68414.m05285 glycosyl hydrolase family 1 protein con... 27 9.5
At1g12460.1 68414.m01440 leucine-rich repeat transmembrane prote... 27 9.5
>At4g25580.1 68417.m03686 stress-responsive protein-related contains
weak similarity to Low-temperature-induced 65 kDa
protein (Desiccation-responsive protein 29B)
(Swiss-Prot:Q04980) [Arabidopsis thaliana]
Length = 626
Score = 33.1 bits (72), Expect = 0.14
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2
Query: 98 HEHDRGEHEPDEHSALEKRSPRYDF 172
HEHDRGEH PD+H L++ D+
Sbjct: 60 HEHDRGEHIPDDHD-LDQEDDEDDY 83
>At4g00260.1 68417.m00033 transcriptional factor B3 family protein
low similarity to reproductive meristem gene 1 from
[Brassica oleracea var. botrytis] GI:3170424,
[Arabidopsis thaliana] GI:13604227; contains Pfam
profile PF02362: B3 DNA binding domain
Length = 528
Score = 30.7 bits (66), Expect = 0.77
Identities = 33/128 (25%), Positives = 50/128 (39%), Gaps = 3/128 (2%)
Frame = -3
Query: 589 PESEVELAAEPFPESEVVAVGALAETEVVHGKPLAQPEVVHPSALLFR*IFVCDALAQSE 410
PES+ E E E V E E P V PS+L + +++ +
Sbjct: 245 PESDAERNLEKIQRKEKVKKNVTREAESSSQDPSCFVANVSPSSLRYDTLYLPKRFMREN 304
Query: 409 AVGSSALNFVSCGIIILVEEFRESWWVRL-VGEILGTELIVH--RPFAQTERVRT*SFPK 239
V CG +IL+ E +SW + L V + GT LI R F +R S
Sbjct: 305 GVDKR------CGEMILINEKGKSWTLDLKVKKSSGTSLIKRGWRSFCSANGLRAGSIIT 358
Query: 238 AEVINGKS 215
++I ++
Sbjct: 359 LKLIKKRA 366
>At2g45000.1 68415.m05603 expressed protein contains Pfam profile:
PF05064 Nsp1-like C-terminal region
Length = 739
Score = 30.3 bits (65), Expect = 1.0
Identities = 31/112 (27%), Positives = 46/112 (41%)
Frame = +3
Query: 165 TTSDLASAPTVTSLNTKDFPFITSALGNDHVLTRSVWANGRWTMSSVPRISPTRRTHQLS 344
T+S SAP T+ ++ F F TSA ++ T S A T +V I+ T T S
Sbjct: 346 TSSTTPSAPPQTASSSSSFSFGTSANSGFNLSTGSSAAPASSTSGAVFSIATTTTTSS-S 404
Query: 345 LNSSTSMMIPQDTKLSALDPTASDWASASQTKIYLKRSALGCTTSGWASGFP 500
++TS + P+ +SA+ T + T G AS P
Sbjct: 405 TPAATSAPASSAPASTMAFPSFGVTSSATNTTPASSAATFSTTGFGLASSTP 456
>At4g05200.1 68417.m00783 protein kinase family protein contains
Prosite:PS00108: Serine/Threonine protein kinases
active-site signature
Length = 675
Score = 29.9 bits (64), Expect = 1.3
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 4/113 (3%)
Frame = +2
Query: 5 NKTRVNIMLYMSVTVCLLVLGAVLSAPERVPHEHDRGEHEP-DEHSALEKRSPRYDFGLG 181
N T + + + V+VC+L+LGA+ R + E E DE + ++ F
Sbjct: 281 NLTVIVTAIAVPVSVCVLLLGAMCWLLARRRNNKLSAETEDLDEDGITSTETLQFQFSAI 340
Query: 182 KRAYSYVSEYKRLPVYNFG---LGKRSRPYSFGLGKRSVDDELGAEDLPNETD 331
+ A + SE +L FG G+ + + + S GAE+ NE D
Sbjct: 341 EAATNKFSESNKLGHGGFGEVYKGQLITGETVAIKRLSQGSTQGAEEFKNEVD 393
>At3g17160.1 68416.m02189 expressed protein
Length = 165
Score = 29.9 bits (64), Expect = 1.3
Identities = 22/71 (30%), Positives = 32/71 (45%)
Frame = +2
Query: 290 DDELGAEDLPNETDPPALSELFDEYDDTAGYEVKRARPYSFGLGKRIADEDLSEEKRARM 469
DDE G EDL E + E+ DE DD + ++ P GL + DE++ E+
Sbjct: 75 DDEEGEEDLGTEYLVRPVGEVEDE-DDASDFD-----PEENGLDEEEGDEEIEEDDVDED 128
Query: 470 YDFGLGKRLPM 502
GK P+
Sbjct: 129 ISLSAGKSEPL 139
>At5g19460.1 68418.m02319 MutT/nudix family protein similar to
SP|P41888 Thiamine pyrophosphokinase (EC 2.7.6.2) (TPK)
(Thiamine kinase) {Schizosaccharomyces pombe}; contains
Pfam profile PF00293: NUDIX domain
Length = 374
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +3
Query: 228 ITSALGNDHVLTRSVWANGRWTMSSVPRISPTRRTHQLSLNSSTSMMI 371
+T++L + H +TR V RW SS+ +SP R H +L+++T++ I
Sbjct: 12 VTTSLFSSHAITRRVLPILRWRSSSM-SLSPLR--HSRALSAATTVPI 56
>At5g60010.1 68418.m07525 ferric reductase-like transmembrane
component family protein similar to respiratory burst
oxidase protein D RbohD from Arabidopsis thaliana,
EMBL:AF055357 [gi:3242789], respiratory burst oxidase
homolog from Solanum tuberosum [GI:16549089]; contains
Pfam profile PF01794 Ferric reductase like transmembrane
component
Length = 839
Score = 29.1 bits (62), Expect = 2.4
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +3
Query: 222 PF-ITSALGNDHVLTRSVWANGRWTMSSVPRISPTRRTHQLSLNSSTSMMIPQDTKLSAL 398
PF ITSA G+D+ L+ + A G WT R + T Q + + ++ +T+ + +
Sbjct: 602 PFSITSAPGDDY-LSVHIRALGDWTTELRSRFAKTCEPTQAAAKPKPNSLMRMETRAAGV 660
Query: 399 DPTASDWASASQTKIYLK 452
+P + + KI++K
Sbjct: 661 NPHIEE-SQVLFPKIFIK 677
>At3g45810.1 68416.m04958 ferric reductase-like transmembrane
component family protein similar to respiratory burst
oxidase protein D RbohD from Arabidopsis thaliana,
EMBL:AF055357 [gi:3242789], similar to respiratory burst
oxidase protein D RbohD from Arabidopsis thaliana,
EMBL:AF055357 [gi:3242789], respiratory burst oxidase
homolog from Solanum tuberosum [GI:16549089]; contains
Pfam profile PF01794 Ferric reductase like transmembrane
component
Length = 912
Score = 29.1 bits (62), Expect = 2.4
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +3
Query: 222 PF-ITSALGNDHVLTRSVWANGRWTMSSVPRISPTRRTHQLSLNSSTSMMIPQDTKLSAL 398
PF ITSA G+++ L+ + A G WT R + T HQ S S + +I +T+
Sbjct: 612 PFSITSAPGDEY-LSVHIRALGDWTSELRNRFAETCEPHQKS-KPSPNDLIRMETRARGA 669
Query: 399 DPTASDWASASQTKIYLK 452
+P + + A +I++K
Sbjct: 670 NPHVEE-SQALFPRIFIK 686
>At2g46240.1 68415.m05750 IQ domain-containing protein / BAG
domain-containing protein contains Pfam profiles PF00612:
IQ calmodulin-binding motif, PF02179: BAG (Apoptosis
regulator Bcl-2 protein) domain
Length = 1043
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 583 SEVELAAEPFPESEVVAVGALAETEVVHGKPLAQPEVVHP 464
SE + E PE+EV+ ETEV+ + +PE+ P
Sbjct: 931 SEPQDEKEQSPETEVIVKEQPLETEVILNEQAPEPEITEP 970
>At1g44030.1 68414.m05079 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 597
Score = 28.7 bits (61), Expect = 3.1
Identities = 23/94 (24%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Frame = -3
Query: 583 SEVELAAEPFPESEVVAVGALAETEV--VHGKPLAQPEVVHPSALLFR*IFVCDALAQSE 410
S ++L EP PESE ++V + + + H ++P+ + + +FR I D L +
Sbjct: 169 SSLDLETEPEPESEFISVVSCIKQIISFAHSISNSEPDFISSTTEMFRLISSID-LEEEP 227
Query: 409 AVGSSALNFVSCGIIILVEEFRESWWVRLVGEIL 308
+ +AL + ++ ++ R+S + L+G+I+
Sbjct: 228 PMKLAALFQHTLSLLYSMD--RDSELIILIGKII 259
>At1g13280.1 68414.m01542 allene oxide cyclase family protein
similar to ERD12 [GI:15320414], allene oxide cyclase
GI:8977961 from [Lycopersicon esculentum]; contains Pfam
profile PF06351: Allene oxide cyclase
Length = 254
Score = 28.3 bits (60), Expect = 4.1
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = +2
Query: 191 YSYVSEYKRLPVYNFGLGKRSRPYSFGLGKRSVDDELGAEDLPNETDPPALSELFDEYDD 370
YS ++ + L VY F G R+ P LGK+ D+L DL T+ +L
Sbjct: 75 YSRPTKIQELNVYEFNEGDRNSPAVLKLGKK--PDQLCLGDLVPFTNKLYTGDLTKRIGI 132
Query: 371 TAG 379
TAG
Sbjct: 133 TAG 135
>At1g51470.1 68414.m05793 glycosyl hydrolase family 1 protein
contains Pfam PF00232 : Glycosyl hydrolase family 1
domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
similar to Myrosinase precursor (SP:P37702) [Arabidopsis
thaliana]; similar to thioglucosidase (GI:871992)
[Arabidopsis thaliana]
Length = 511
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 296 HRPPTVCPDRTSKDVIVSQGRSYKREVFCIQRRN 195
HR P PDR+S D+ YK +V ++R N
Sbjct: 81 HRYPEKVPDRSSADLACDSYDLYKDDVKLLKRMN 114
>At5g61960.1 68418.m07777 RNA recognition motif (RRM)-containing
protein Mei2-like protein, Arabidopsis thaliana,
EMBL:D86122
Length = 915
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 282 GRWTMSSVPRISPTRRTHQLSLNSSTSMMIPQDTKLSALDPTASDWASA 428
GR +SS+P+ S T ++QL SS S P + + S W S+
Sbjct: 43 GRDRLSSMPKSSWTSESYQLKPQSSFSGSHPSGSPNARNTTNGSQWESS 91
>At5g01190.1 68418.m00024 laccase, putative / diphenol oxidase,
putative similar to diphenol oxidase [Nicotiana
tabacum][GI:1685087]
Length = 553
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -3
Query: 589 PESEVELAAEPFPESEVVAVGALAETEVVH 500
P + +AA PF +S VVAV T VH
Sbjct: 270 PSGQYLIAAAPFQDSAVVAVDNRTATATVH 299
>At3g05570.1 68416.m00617 expressed protein
Length = 90
Score = 27.1 bits (57), Expect = 9.5
Identities = 18/68 (26%), Positives = 33/68 (48%)
Frame = +2
Query: 254 RPYSFGLGKRSVDDELGAEDLPNETDPPALSELFDEYDDTAGYEVKRARPYSFGLGKRIA 433
+P + K++ DD ED+ + D ++ D++ + +K+ FGL K +A
Sbjct: 13 KPATSSCRKKTKDDANFLEDVKDHIDD-FINASMDDHKNCFNKTIKKM----FGLSKAVA 67
Query: 434 DEDLSEEK 457
D+ SE K
Sbjct: 68 DKQQSEAK 75
>At1g47600.1 68414.m05285 glycosyl hydrolase family 1 protein
contains Pfam PF00232 : Glycosyl hydrolase family 1
domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
similar to thioglucosidase (GI:871992) [Arabidopsis
thaliana]
Length = 511
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 296 HRPPTVCPDRTSKDVIVSQGRSYKREVFCIQRRN 195
HR P PDR+S D+ YK +V ++R N
Sbjct: 81 HRYPEKVPDRSSGDLACDSYDLYKDDVKLLKRMN 114
>At1g12460.1 68414.m01440 leucine-rich repeat transmembrane protein
kinase, putative
Length = 882
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +2
Query: 443 LSEEKRARMYDFGLGKRLP-MYNFGLGKRAYS 535
L E A++ D+GL K LP M +FGL K+ ++
Sbjct: 735 LDERYEAKLSDYGLEKFLPVMDSFGLTKKFHN 766
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,444,143
Number of Sequences: 28952
Number of extensions: 232988
Number of successful extensions: 845
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 845
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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