Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_C04
         (566 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   2.4  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   2.4  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      21   5.6  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   9.7  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 7/34 (20%), Positives = 21/34 (61%)
 Frame = -1

Query: 392 IDVIF*VTFDIRTAFRIWLLGVYLCDVAMFVICS 291
           + ++   T D+R +  I+L+ + + D+ + ++C+
Sbjct: 89  VPIVIFKTKDMRNSTNIFLVNLSVADLMVLLVCT 122


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 7/34 (20%), Positives = 21/34 (61%)
 Frame = -1

Query: 392 IDVIF*VTFDIRTAFRIWLLGVYLCDVAMFVICS 291
           + ++   T D+R +  I+L+ + + D+ + ++C+
Sbjct: 89  VPIVIFKTKDMRNSTNIFLVNLSVADLMVLLVCT 122


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 291 ATNDEHCHVTEIDPKKPYPECCP 359
           +T DE C VT +     YP C P
Sbjct: 36  STTDE-CQVTPVIHVLQYPGCVP 57


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 53  IDKNGVENFNNI 88
           +D+NG  NF N+
Sbjct: 77  VDQNGFRNFTNL 88


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,360
Number of Sequences: 336
Number of extensions: 3167
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)