Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_C03
         (515 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   1.6  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   2.8  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   6.5  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   6.5  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   8.6  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +2

Query: 395 KELDRQTVSYPWTAPKDLEGDVVFKVTIVKSYAV 496
           K +  Q +  PWTAP+ ++     K  I K Y++
Sbjct: 450 KNMPSQYIHEPWTAPEQVQR--AAKCIIGKDYSL 481


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 136 PGHAADVQTVPAALHHHYSCQLGK 207
           PG  +   T  + +HHH +  LGK
Sbjct: 121 PGATSQPPTDNSHVHHHQTSLLGK 144


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -1

Query: 392 HASCGSRRYLVH 357
           HA+CG++  L+H
Sbjct: 357 HATCGTKNALLH 368


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +2

Query: 305 GTWTVSPDDTFSQ 343
           G W  SPD+ F Q
Sbjct: 74  GQWNYSPDNHFEQ 86


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -1

Query: 308 CRRSCHPDELPGGCR 264
           C R C  D +P  CR
Sbjct: 44  CARKCVKDSVPMTCR 58


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,802
Number of Sequences: 336
Number of extensions: 2988
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)