Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_C02
         (526 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z98866-24|CAB11568.2|  366|Caenorhabditis elegans Hypothetical p...    30   1.2  
AF047658-1|AAC04418.2|  348|Caenorhabditis elegans Hypothetical ...    29   2.0  
Z46793-4|CAA86773.1|  889|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z34800-5|CAA84325.1|  889|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z98866-15|CAB11554.2|  335|Caenorhabditis elegans Hypothetical p...    27   8.2  
Z70284-14|CAA94285.4|  422|Caenorhabditis elegans Hypothetical p...    27   8.2  
U58748-10|AAB52970.2|  701|Caenorhabditis elegans Hypothetical p...    27   8.2  
AL132904-3|CAB60972.1|  718|Caenorhabditis elegans Hypothetical ...    27   8.2  

>Z98866-24|CAB11568.2|  366|Caenorhabditis elegans Hypothetical
           protein Y49E10.25 protein.
          Length = 366

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +1

Query: 265 KLLLEGQPNVVEYAYSLWYRSGEDIVKVYFPIEFRLLFNEDPV 393
           KL+  GQP V +Y ++ W+          FP  FR++ + DP+
Sbjct: 260 KLVTFGQPRVADYDHAAWH-------DATFPYSFRVINSRDPI 295


>AF047658-1|AAC04418.2|  348|Caenorhabditis elegans Hypothetical
           protein K03H6.2 protein.
          Length = 348

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +1

Query: 265 KLLLEGQPNVVEYAYSLWYRS 327
           KLL  GQP   +YAYS W+++
Sbjct: 227 KLLTAGQPRTGDYAYSNWHQN 247


>Z46793-4|CAA86773.1|  889|Caenorhabditis elegans Hypothetical
           protein F45H7.6 protein.
          Length = 889

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 364 FRLLFNEDPVLITNKRDELALKLELKTDYAG 456
           FR++ N DP ++   R  +  + EL  DY G
Sbjct: 534 FRIILNVDPFVLKKSRLHIRFEGELALDYGG 564


>Z34800-5|CAA84325.1|  889|Caenorhabditis elegans Hypothetical
           protein F45H7.6 protein.
          Length = 889

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 364 FRLLFNEDPVLITNKRDELALKLELKTDYAG 456
           FR++ N DP ++   R  +  + EL  DY G
Sbjct: 534 FRIILNVDPFVLKKSRLHIRFEGELALDYGG 564


>Z98866-15|CAB11554.2|  335|Caenorhabditis elegans Hypothetical
           protein Y49E10.18 protein.
          Length = 335

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +1

Query: 265 KLLLEGQPNVVEYAYSLWYRSGEDIVKVYFPIEFRLLFNEDPV 393
           KL+  GQP   +Y Y++W+          FP  FR++ + D V
Sbjct: 227 KLVTMGQPRTGDYDYAVWHDK-------TFPYSFRIVHHRDIV 262


>Z70284-14|CAA94285.4|  422|Caenorhabditis elegans Hypothetical
           protein K07F5.14 protein.
          Length = 422

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
 Frame = +1

Query: 142 NADPVMQLYNSVIVSDY-------KAAVKTTFQLEKECRSDVISSVVNKLLLEGQPNVVE 300
           N+DP  +L +    SD        +++ K   +LEK+   +++S ++ K + E +PN +E
Sbjct: 123 NSDPRFKLDDKFAESDSDEDGNMEQSSEKQEMKLEKDKNRELLSKILGKSVEEKKPNTIE 182


>U58748-10|AAB52970.2|  701|Caenorhabditis elegans Hypothetical
           protein ZK180.6 protein.
          Length = 701

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
 Frame = +1

Query: 142 NADPVMQLYNSVIVSDYKAAVKTTFQLEKECRS----DVISSVVNKLLLEGQ--PNVVEY 303
           +A PV Q + ++   + K   + +  +E    +    D   SV NK+  E    PN+ EY
Sbjct: 605 SAAPVSQFFENITSKEDKETSQPSETVETAPANGNDYDEEKSVENKVSTETDAVPNLGEY 664

Query: 304 AYSLWYRSGEDIVKVYFPIEFRLLFNEDP 390
                   G +  +V  PI+   + NE+P
Sbjct: 665 GSKFAKVQGAETKQVSEPIQIETIENENP 693


>AL132904-3|CAB60972.1|  718|Caenorhabditis elegans Hypothetical
           protein Y111B2A.3 protein.
          Length = 718

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 15/55 (27%), Positives = 27/55 (49%)
 Frame = +1

Query: 169 NSVIVSDYKAAVKTTFQLEKECRSDVISSVVNKLLLEGQPNVVEYAYSLWYRSGE 333
           ++ ++ + K  +K   Q  K+   D   S +   +L   P  VE+A S W++S E
Sbjct: 333 SNTVIENCKMILKAIGQSMKQPFDDEAKSYLTSEVLRKFPWPVEFACSTWFKSLE 387


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.316    0.133    0.381 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,940,667
Number of Sequences: 27780
Number of extensions: 177185
Number of successful extensions: 459
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 459
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1028310386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)