BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I09A02NGRL0001_C01 (509 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U40800-6|AAA81492.1| 171|Caenorhabditis elegans Hypothetical pr... 29 1.5 U23411-1|AAC46730.2| 231|Caenorhabditis elegans Hypothetical pr... 29 1.5 U00025-3|AAA50619.1| 804|Caenorhabditis elegans Hypothetical pr... 29 2.0 AB110823-1|BAD80738.1| 804|Caenorhabditis elegans chondroitin p... 29 2.0 >U40800-6|AAA81492.1| 171|Caenorhabditis elegans Hypothetical protein D2096.6 protein. Length = 171 Score = 29.5 bits (63), Expect = 1.5 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = +3 Query: 321 EIDPKKPYPECCPDIKCDSEN 383 E DPK+P+P+C P C + N Sbjct: 61 ECDPKRPWPQCPPQSYCYATN 81 >U23411-1|AAC46730.2| 231|Caenorhabditis elegans Hypothetical protein T25E4.1 protein. Length = 231 Score = 29.5 bits (63), Expect = 1.5 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = +3 Query: 321 EIDPKKPYPECCPDIKCDSEN 383 E DPK+P+P+C P C + N Sbjct: 120 ECDPKRPWPQCPPQSYCYATN 140 >U00025-3|AAA50619.1| 804|Caenorhabditis elegans Hypothetical protein PAR2.4a protein. Length = 804 Score = 29.1 bits (62), Expect = 2.0 Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Frame = +1 Query: 235 ATELPVEEA*LITLLVVLSLQMTNIATSQR*TPRSHIL-NAVRISNVTQKMTSMSYLKL 408 ATEL E + ++ +L ++ AT R PR H+ ++ RI N ++T++S KL Sbjct: 99 ATELGTRERVMAAVMAESALALSINATLGRHVPRVHLFADSSRIDNDLAQLTNLSPYKL 157 >AB110823-1|BAD80738.1| 804|Caenorhabditis elegans chondroitin polymerizing factor protein. Length = 804 Score = 29.1 bits (62), Expect = 2.0 Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Frame = +1 Query: 235 ATELPVEEA*LITLLVVLSLQMTNIATSQR*TPRSHIL-NAVRISNVTQKMTSMSYLKL 408 ATEL E + ++ +L ++ AT R PR H+ ++ RI N ++T++S KL Sbjct: 99 ATELGTRERVMAAVMAESALALSINATLGRHVPRVHLFADSSRIDNDLAQLTNLSPYKL 157 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,911,286 Number of Sequences: 27780 Number of extensions: 257271 Number of successful extensions: 583 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 553 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 583 length of database: 12,740,198 effective HSP length: 76 effective length of database: 10,628,918 effective search space used: 988489374 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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