Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_B24
         (515 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8 ...    23   1.9  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   2.5  
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    23   2.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   2.5  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    22   4.3  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    22   4.3  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   4.3  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   7.5  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              21   10.0 
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   10.0 

>AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8
           protein.
          Length = 208

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -2

Query: 202 RSPFRDHQTFGLASFAAENKRSPSRLYLI 116
           R P R  + F L   AA  K  P R++ +
Sbjct: 18  RKPIRKKRKFELGRPAANTKLGPQRIHTV 46


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 10/60 (16%)
 Frame = +3

Query: 150 SAAKDAKPNVWWSLNGERLGTFNG----------HGGVVWCLDVDWQSIHLITGGGDSSC 299
           SAA +  P V W+L+G  L T NG          HG V+  +++   S  ++  GG+ SC
Sbjct: 444 SAAGNPTPQVTWALDGFALPT-NGRFMIGQYVTVHGDVISHVNI---SHVMVEDGGEYSC 499


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 7/14 (50%), Positives = 7/14 (50%)
 Frame = -3

Query: 330 CSCQSPDPTNGTNC 289
           C C    P  GTNC
Sbjct: 5   CECDLATPRTGTNC 18


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 10/60 (16%)
 Frame = +3

Query: 150 SAAKDAKPNVWWSLNGERLGTFNG----------HGGVVWCLDVDWQSIHLITGGGDSSC 299
           SAA +  P V W+L+G  L T NG          HG V+  +++   S  ++  GG+ SC
Sbjct: 444 SAAGNPTPQVTWALDGFALPT-NGRFMIGQYVTVHGDVISHVNI---SHVMVEDGGEYSC 499


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = +3

Query: 399 YTTDKAMGHPCEVFIVDTRTIDESISDQAPIL 494
           ++T K++  P  +FIV     D  ++ + P+L
Sbjct: 82  FSTSKSLRTPSNMFIVSLAIFDIIMAFEMPML 113


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = +3

Query: 399 YTTDKAMGHPCEVFIVDTRTIDESISDQAPIL 494
           ++T K++  P  +FIV     D  ++ + P+L
Sbjct: 82  FSTSKSLRTPSNMFIVSLAIFDIIMAFEMPML 113


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 151 ENKRSPSRLYLICVIARSCP 92
           E + SP+    +CV  R CP
Sbjct: 92  ECELSPNSTIAVCVCMRKCP 111


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 153 AAKDAKPNVWWSLNGERL 206
           A+ +  P + W L+G+RL
Sbjct: 417 ASGNPTPEITWELDGKRL 434


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -1

Query: 467 FIDSSGIYNEYLTR 426
           F+D  G +NE+++R
Sbjct: 72  FVDKDGNFNEHVSR 85


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/33 (24%), Positives = 13/33 (39%)
 Frame = -1

Query: 386 CTKAEITCSHRGICFYCGNVLASLQIPQTARTV 288
           C    +T        YCGN+  +++      TV
Sbjct: 95  CNAGSLTVKKNFANKYCGNITLNIESTSNKMTV 127


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,382
Number of Sequences: 438
Number of extensions: 3198
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)