Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_B23
(310 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0517 + 9054816-9055655 29 0.74
04_04_1630 - 34896021-34896143,34896329-34896403,34896500-348965... 27 2.3
02_05_1001 + 33423562-33424098 27 2.3
01_05_0197 + 19143582-19143618,19143814-19144523 27 3.0
05_05_0039 - 21782093-21782320,21782383-21782754,21783031-217834... 27 4.0
01_06_0630 - 30723903-30724496 27 4.0
07_01_0501 - 3745447-3746244 26 5.2
11_06_0120 - 20324794-20325204,20325416-20325545,20326172-203262... 26 6.9
11_01_0259 + 1981554-1982249 26 6.9
05_06_0054 + 25231531-25231590,25232111-25232215 26 6.9
04_04_0236 + 23825368-23825763,23826229-23828667 26 6.9
01_06_1034 + 33962813-33963802 26 6.9
10_01_0267 - 2828966-2829340,2831164-2831629,2833390-2833487,283... 25 9.2
08_02_0839 + 21693348-21694853 25 9.2
07_03_1375 + 26120094-26120651 25 9.2
05_07_0126 + 27869058-27869805,27869988-27870328,27870430-278705... 25 9.2
05_05_0290 - 23879064-23880035 25 9.2
03_02_0338 + 7614199-7614450,7614518-7614703,7614815-7614927,761... 25 9.2
03_01_0436 + 3384526-3385236,3387857-3388720 25 9.2
01_06_1391 + 36992276-36992476,36992609-36992794,36993215-369933... 25 9.2
01_06_0194 - 27368563-27370956 25 9.2
>03_02_0517 + 9054816-9055655
Length = 279
Score = 29.1 bits (62), Expect = 0.74
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +3
Query: 81 ENLKHVCCLRTWSLLFRSAPICCTNLPASKLTHIKWFHSMRIWTL 215
+++ H C+ W L S P+C LPA+ + + IW L
Sbjct: 154 KHVYHQDCILPWLSLRNSCPVCRRELPAAAAPESEADAGLTIWRL 198
>04_04_1630 - 34896021-34896143,34896329-34896403,34896500-34896556,
34897176-34897352,34897426-34897492,34898043-34898101,
34898188-34898241,34898455-34898604,34898709-34898918,
34898980-34899039,34899399-34899527,34899616-34899720,
34899935-34900024,34900630-34900695,34901047-34901115,
34901348-34901467,34901572-34901634,34901681-34901817,
34902070-34902160,34902298-34902463,34902700-34904172,
34905666-34905940,34906322-34906819,34906996-34907145,
34907840-34907911,34908006-34908266,34908478-34908558,
34908745-34908996,34909323-34909382,34909602-34909853,
34910385-34910549,34910589-34910849,34911267-34912307,
34913398-34913457,34914055-34914165,34914448-34914534,
34915227-34915300,34915397-34915490,34915644-34915689,
34916397-34916521
Length = 2501
Score = 27.5 bits (58), Expect = 2.3
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 206 LDIDRAHANYRAITNLKRQFPQLRVFL 286
+ +D ANYRA+ L + FP ++ F+
Sbjct: 2373 ITLDTPGANYRAVWALSKYFPNVKTFV 2399
>02_05_1001 + 33423562-33424098
Length = 178
Score = 27.5 bits (58), Expect = 2.3
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -2
Query: 225 CARSMSKFSLSETILYVSA--WMPADLYSRWVQNERA 121
CA S E + + S W PAD+ + WV ERA
Sbjct: 80 CALVHSHGPYGENLFHGSGVGWAPADVVAAWVSRERA 116
>01_05_0197 + 19143582-19143618,19143814-19144523
Length = 248
Score = 27.1 bits (57), Expect = 3.0
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Frame = +2
Query: 47 VLCYYDSKSYIRES-------QARMLPTDLEPALSFCTHLLYKSAGIQADTYKM 187
+ +YD KS IR+ + ++ D+E + F HL+ +S G+ D +K+
Sbjct: 132 ITSHYDGKSGIRKHILEMTHMENQLRSMDMEISDGFLVHLIMRSLGLNYDPFKI 185
>05_05_0039 -
21782093-21782320,21782383-21782754,21783031-21783496,
21784896-21784993,21785179-21785362,21785462-21785574,
21785942-21786127,21786191-21786364
Length = 606
Score = 26.6 bits (56), Expect = 4.0
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 108 RTWSLLFRSAPICCTNLPASKLTHIKWFHSMRIWTLIG 221
RTW+ +F + CC S I FH+ RIW+ +G
Sbjct: 170 RTWTYIFGA---CC-----STTVFIPSFHNYRIWSFLG 199
>01_06_0630 - 30723903-30724496
Length = 197
Score = 26.6 bits (56), Expect = 4.0
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +3
Query: 93 HVCCLRTWSLLFRSAPIC 146
HVCCL W S P+C
Sbjct: 146 HVCCLDAWLRRNASCPVC 163
>07_01_0501 - 3745447-3746244
Length = 265
Score = 26.2 bits (55), Expect = 5.2
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +2
Query: 83 ESQARMLPTDLEPALSFCTHLLYKSAGIQADTYKMVSLNENLDIDRAHA 229
E+ R L E A H+L +AG+ D Y +S D DR A
Sbjct: 83 ETGVRALFDAAESAFGAGAHILVANAGLLDDRYPHLSNTPTADFDRTIA 131
>11_06_0120 -
20324794-20325204,20325416-20325545,20326172-20326255,
20326584-20326823,20327418-20327498,20327761-20328113
Length = 432
Score = 25.8 bits (54), Expect = 6.9
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -3
Query: 188 PFYMCQLGCRQICTADGCRTKEQAPSP*AAYVLEI-L*YSSCCH 60
P ++C + CR IC CRTK+ AAY + L Y S H
Sbjct: 265 PDWICPV-CRGICNCSICRTKKGWFPTGAAYRKVVSLGYKSVAH 307
>11_01_0259 + 1981554-1982249
Length = 231
Score = 25.8 bits (54), Expect = 6.9
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 93 HVCCLRTWSLLFRSAPICCTNLPA 164
H C+ +W L+ R P+C LPA
Sbjct: 169 HEQCIFSWLLINRHCPLCRFPLPA 192
>05_06_0054 + 25231531-25231590,25232111-25232215
Length = 54
Score = 25.8 bits (54), Expect = 6.9
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +3
Query: 135 APICCTNLPASKLTHIKWFHSMRIWTLIGRTLIIE 239
A +CC+ + A+ + + IWTL+ +L I+
Sbjct: 18 AAVCCSTVAAAACATVPLNSCICIWTLLASSLAID 52
>04_04_0236 + 23825368-23825763,23826229-23828667
Length = 944
Score = 25.8 bits (54), Expect = 6.9
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = +2
Query: 14 NHPASPSSQSKVLCYYDSKSYIRESQARMLPTDLEPAL 127
NHP +P ++C+ D + RE + T L P +
Sbjct: 276 NHPCNPEMVRFMMCFKDLPDWQREHRPFNAKTRLNPKI 313
>01_06_1034 + 33962813-33963802
Length = 329
Score = 25.8 bits (54), Expect = 6.9
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +3
Query: 81 ENLKHVCCLRTWSLLFRSAPICCTNLPAS 167
++L H C+ W + S P+C LP+S
Sbjct: 211 KHLYHAECIIPWLVQHNSCPVCRHPLPSS 239
>10_01_0267 -
2828966-2829340,2831164-2831629,2833390-2833487,
2833782-2834078,2834287-2834694
Length = 547
Score = 25.4 bits (53), Expect = 9.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 108 RTWSLLFRSAPICCTNLPASKLTHIKWFHSMRIWTLIG 221
RTW+ +F + CC I FH+ RIW+ +G
Sbjct: 186 RTWTYIFGA---CCATT-----VFIPSFHNYRIWSFLG 215
>08_02_0839 + 21693348-21694853
Length = 501
Score = 25.4 bits (53), Expect = 9.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 93 HVCCLRTWSLLFRSAPICCTNLPA 164
HV C+ TW L + P+C +L A
Sbjct: 177 HVDCIDTWLLSHSTCPLCRRSLLA 200
>07_03_1375 + 26120094-26120651
Length = 185
Score = 25.4 bits (53), Expect = 9.2
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 93 HVCCLRTWSLLFRSAPICCTNLPASK 170
H CL W + S P+C LPA++
Sbjct: 109 HSECLERWLGVHGSCPVCRRELPAAE 134
>05_07_0126 +
27869058-27869805,27869988-27870328,27870430-27870510,
27870978-27871073,27871152-27871307,27871575-27871721
Length = 522
Score = 25.4 bits (53), Expect = 9.2
Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +3
Query: 93 HVCCLRTWSLLFRSAPIC-CTNLPASK 170
H C++ W ++ PIC T LPA +
Sbjct: 493 HAMCIKGWLMVKNLCPICKTTALPADR 519
>05_05_0290 - 23879064-23880035
Length = 323
Score = 25.4 bits (53), Expect = 9.2
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +3
Query: 81 ENLKHVCCLRTWSLLFRSAPICCTNLPASK 170
E+ H C+ W L S P+C LP+ +
Sbjct: 218 EHKFHSSCILPWLELHSSCPVCRFELPSEE 247
>03_02_0338 +
7614199-7614450,7614518-7614703,7614815-7614927,
7615023-7615206,7615343-7615440,7616113-7616578,
7617342-7617683
Length = 546
Score = 25.4 bits (53), Expect = 9.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 108 RTWSLLFRSAPICCTNLPASKLTHIKWFHSMRIWTLIG 221
RTW+ +F + CC I FH+ RIW+ +G
Sbjct: 196 RTWTYIFGA---CCATT-----VFIPSFHNYRIWSFLG 225
>03_01_0436 + 3384526-3385236,3387857-3388720
Length = 524
Score = 25.4 bits (53), Expect = 9.2
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 122 ALSFCTHLLYKSAGIQADTYKMVSLNENLDIDRAHANYR 238
A+ HLL + A+TY +V EN+ ++ NYR
Sbjct: 228 AIDLAKHLLQ----VHAETYALVVSTENITLNAYMGNYR 262
>01_06_1391 +
36992276-36992476,36992609-36992794,36993215-36993327,
36993504-36993687,36993799-36993900
Length = 261
Score = 25.4 bits (53), Expect = 9.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 108 RTWSLLFRSAPICCTNLPASKLTHIKWFHSMRIWTLIG 221
RTW+ +F + CC I FH+ RIW+ +G
Sbjct: 179 RTWTYIFGA---CCATT-----VFIPSFHNYRIWSFLG 208
>01_06_0194 - 27368563-27370956
Length = 797
Score = 25.4 bits (53), Expect = 9.2
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 261 SFLNCACS*PWEVMTT 308
SF C+C+ PW MTT
Sbjct: 14 SFHLCSCASPWRTMTT 29
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,542,428
Number of Sequences: 37544
Number of extensions: 147995
Number of successful extensions: 436
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 436
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 375959444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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