Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_B23
(310 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25657| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 48 1e-06
SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 2e-06
SB_55143| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 44 3e-05
SB_38742| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.001
SB_52654| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.1
SB_8304| Best HMM Match : PLAT (HMM E-Value=0) 27 3.1
SB_50380| Best HMM Match : PMC2NT (HMM E-Value=2.4) 27 4.1
SB_9718| Best HMM Match : Metallothio_2 (HMM E-Value=1.3) 27 4.1
SB_7559| Best HMM Match : Metallothio_2 (HMM E-Value=2) 27 4.1
SB_45113| Best HMM Match : CemA (HMM E-Value=6) 26 5.4
SB_32905| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.4
SB_47930| Best HMM Match : Vicilin_N (HMM E-Value=1.3) 26 5.4
SB_44353| Best HMM Match : GRP (HMM E-Value=4.9) 26 5.4
SB_22053| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.4
SB_19172| Best HMM Match : GRP (HMM E-Value=4.9) 26 5.4
SB_29942| Best HMM Match : NIF3 (HMM E-Value=9.7e-16) 26 7.2
SB_19870| Best HMM Match : RVT_1 (HMM E-Value=0.18) 26 7.2
SB_10768| Best HMM Match : Collagen (HMM E-Value=1.5) 26 7.2
SB_30955| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.2
SB_56109| Best HMM Match : Collagen (HMM E-Value=0.79) 25 9.5
SB_42154| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5
SB_35620| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5
SB_35570| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5
SB_52413| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5
SB_27578| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5
>SB_25657| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 829
Score = 48.4 bits (110), Expect = 1e-06
Identities = 28/82 (34%), Positives = 41/82 (50%)
Frame = +2
Query: 53 CYYDSKSYIRESQARMLPTDLEPALSFCTHLLYKSAGIQADTYKMVSLNENLDIDRAHAN 232
CYY + S R P D++P L CTH+L+ A + T+K+ EN H
Sbjct: 25 CYYTNWSQYRPKGGTFWPEDIDPFL--CTHILFSFAKVNQTTHKLDIYEEN-----DHEL 77
Query: 233 YRAITNLKRQFPQLRVFLTVGG 298
Y+ I LK+ P+L+ + VGG
Sbjct: 78 YQRINALKKINPKLKTQIAVGG 99
Score = 44.0 bits (99), Expect = 3e-05
Identities = 26/83 (31%), Positives = 42/83 (50%)
Frame = +2
Query: 50 LCYYDSKSYIRESQARMLPTDLEPALSFCTHLLYKSAGIQADTYKMVSLNENLDIDRAHA 229
+CYY + S R P D++P L CTH+++ + + T+ M +N D D
Sbjct: 409 VCYYTNWSQYRPKGGTFWPEDIDPHL--CTHVIHSFSKVNLTTHVMEKYEKN-DFDL--- 462
Query: 230 NYRAITNLKRQFPQLRVFLTVGG 298
Y+ I LK+ P+L+ + VGG
Sbjct: 463 -YKRINALKKINPKLKTQIAVGG 484
>SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 807
Score = 48.0 bits (109), Expect = 2e-06
Identities = 28/83 (33%), Positives = 43/83 (51%)
Frame = +2
Query: 50 LCYYDSKSYIRESQARMLPTDLEPALSFCTHLLYKSAGIQADTYKMVSLNENLDIDRAHA 229
+CY+ + + R + LP D++P L CTH++Y A I T K+ + N D
Sbjct: 401 VCYFTNWAQYRPDPVKFLPKDIDPLL--CTHIVYAFAKIDPATNKIGTYEWNDD-----R 453
Query: 230 NYRAITNLKRQFPQLRVFLTVGG 298
Y+ I +LK + P L+ L VGG
Sbjct: 454 LYKEINDLKLKNPSLKTLLAVGG 476
>SB_55143| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 270
Score = 44.0 bits (99), Expect = 3e-05
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Frame = +2
Query: 50 LCYYDSKSYIRESQARMLPTDLEPALSFCTHLLYKSAGI-QADTYKMVSLNENLDIDRAH 226
+CY+ + S R+ +A+ P D+ PA CTHL+Y A I Q + M N+ D+ +
Sbjct: 22 VCYHTNWSQYRQGRAKFWPEDI-PA-DLCTHLMYSFAKINQKNELAMYEWND----DKLY 75
Query: 227 ANYRAITNLKRQFPQLRVFLTVGG 298
+ A LK++ P+L+ L VGG
Sbjct: 76 PRFNA---LKQKNPELKTLLAVGG 96
>SB_38742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 438
Score = 38.7 bits (86), Expect = 0.001
Identities = 25/83 (30%), Positives = 42/83 (50%)
Frame = +2
Query: 50 LCYYDSKSYIRESQARMLPTDLEPALSFCTHLLYKSAGIQADTYKMVSLNENLDIDRAHA 229
+CYY + + R A+ P +++P+L CTH++Y A + AD K+ N A
Sbjct: 25 VCYYTNWAQYR-GLAKYTPDNIDPSL--CTHIVYAFAKMNADNSKLAMFEWN-----DAA 76
Query: 230 NYRAITNLKRQFPQLRVFLTVGG 298
Y+ + +LK ++ L VGG
Sbjct: 77 MYKKVNDLKSS-SNMKTLLAVGG 98
>SB_52654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 27.1 bits (57), Expect = 3.1
Identities = 9/33 (27%), Positives = 21/33 (63%)
Frame = +3
Query: 30 LVAKAKSSATMTARAISENLKHVCCLRTWSLLF 128
LVA+ K++ TAR + + +H+ + W++++
Sbjct: 65 LVARCKNALIQTARTVVKRHRHMIAQQRWTVVY 97
>SB_8304| Best HMM Match : PLAT (HMM E-Value=0)
Length = 1182
Score = 27.1 bits (57), Expect = 3.1
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -2
Query: 195 SETILYVSAWMPADLYSRWVQNERAGSKSVGSI 97
+ T++ +AW D Y W+Q + G+ V S+
Sbjct: 398 ASTVIIDTAWCAGDSYDCWLQVDLGGTHCVTSV 430
>SB_50380| Best HMM Match : PMC2NT (HMM E-Value=2.4)
Length = 362
Score = 26.6 bits (56), Expect = 4.1
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 162 ASKLTHIKWFHSMRIWTLIGRTLIIERSQT*KDSFLN 272
A+ L + ++ +W L+G L + Q KDS+LN
Sbjct: 230 ANNLYSVDYYVKKVVWDLMGEVLHYKHQQGTKDSWLN 266
>SB_9718| Best HMM Match : Metallothio_2 (HMM E-Value=1.3)
Length = 279
Score = 26.6 bits (56), Expect = 4.1
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 162 ASKLTHIKWFHSMRIWTLIGRTLIIERSQT*KDSFLN 272
A+ L + ++ +W L+G L + Q KDS+LN
Sbjct: 147 ANNLYSVDYYVKKVVWDLMGEVLHYKHQQGTKDSWLN 183
>SB_7559| Best HMM Match : Metallothio_2 (HMM E-Value=2)
Length = 532
Score = 26.6 bits (56), Expect = 4.1
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 162 ASKLTHIKWFHSMRIWTLIGRTLIIERSQT*KDSFLN 272
A+ L + ++ +W L+G L + Q KDS+LN
Sbjct: 400 ANNLYSVDYYVKKVVWDLMGEVLHYKHQQGTKDSWLN 436
>SB_45113| Best HMM Match : CemA (HMM E-Value=6)
Length = 363
Score = 26.2 bits (55), Expect = 5.4
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 162 ASKLTHIKWFHSMRIWTLIGRTLIIERSQT*KDSFLN 272
A+ L + ++ +W L+G L + Q KDS+LN
Sbjct: 230 ANNLHGVDYYVKKVVWDLMGEVLEYKHQQGTKDSWLN 266
>SB_32905| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 187
Score = 26.2 bits (55), Expect = 5.4
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +3
Query: 30 LVAKAKSSATMTARAISENLKHVCCLRTWSLLFRSAPICCTNLP 161
L+ KA ++T T S+ V CLR + L R+ P C N+P
Sbjct: 110 LMGKAGRASTPTCARRSD----VHCLREYVHLMRTNPDLCVNIP 149
>SB_47930| Best HMM Match : Vicilin_N (HMM E-Value=1.3)
Length = 769
Score = 26.2 bits (55), Expect = 5.4
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 12 PTTQHHLVAKAKSSATMTARAISENLKHVCCLRTW 116
PT H K + T T R ++ +KHV +RT+
Sbjct: 328 PTDIHERRRYRKVTKTKTIRTVTTTVKHVVTVRTY 362
>SB_44353| Best HMM Match : GRP (HMM E-Value=4.9)
Length = 361
Score = 26.2 bits (55), Expect = 5.4
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 162 ASKLTHIKWFHSMRIWTLIGRTLIIERSQT*KDSFLN 272
A+ L + ++ +W L+G L + Q KDS+LN
Sbjct: 229 ANNLYGVDYYVKKVVWDLMGEVLEYKHQQGTKDSWLN 265
>SB_22053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1670
Score = 26.2 bits (55), Expect = 5.4
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 12 PTTQHHLVAKAKSSATMTARAISENLKHVCCLRTW 116
PT H K + T T R ++ +KHV +RT+
Sbjct: 995 PTDIHERRRYRKVTKTKTIRTVTTTVKHVVTVRTY 1029
>SB_19172| Best HMM Match : GRP (HMM E-Value=4.9)
Length = 278
Score = 26.2 bits (55), Expect = 5.4
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 162 ASKLTHIKWFHSMRIWTLIGRTLIIERSQT*KDSFLN 272
A+ L + ++ +W L+G L + Q KDS+LN
Sbjct: 146 ANNLYGVDYYVKKVVWDLMGEVLEYKHQQGTKDSWLN 182
>SB_29942| Best HMM Match : NIF3 (HMM E-Value=9.7e-16)
Length = 200
Score = 25.8 bits (54), Expect = 7.2
Identities = 8/29 (27%), Positives = 14/29 (48%)
Frame = -2
Query: 225 CARSMSKFSLSETILYVSAWMPADLYSRW 139
C S+ + L E + + +W P L +W
Sbjct: 20 CLSSVHQMDLKEVVSNLESWAPTSLAEKW 48
>SB_19870| Best HMM Match : RVT_1 (HMM E-Value=0.18)
Length = 530
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/45 (28%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +2
Query: 167 QADTYKMVSLNENLDIDRAHANYRAITNLKRQFPQLR-VFLTVGG 298
++DT K LN++ ++ + N +I +L+R+ P++ + +T GG
Sbjct: 51 KSDTEKATVLNQHFCLNFSSENTNSIPHLQRRCPKMTDIRVTQGG 95
>SB_10768| Best HMM Match : Collagen (HMM E-Value=1.5)
Length = 274
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 103 AYGLGACSFVLHPSAVQICR 162
A+ LG+CSFV+ PS R
Sbjct: 78 AFSLGSCSFVVEPSKESTAR 97
>SB_30955| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 971
Score = 25.8 bits (54), Expect = 7.2
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +2
Query: 50 LCYYDSKSYIRESQARMLPTDLEPALSFCTHLLYKSAGIQADTYKMVSLNE 202
+ Y+DS S++ A +L E +FC L++ G TY +S+ E
Sbjct: 920 IAYFDSHSHMANHGALVLLCATENMRTFC-EALWRYEGFNKPTYGNLSMVE 969
>SB_56109| Best HMM Match : Collagen (HMM E-Value=0.79)
Length = 327
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +2
Query: 182 KMVSLNENLDIDRAHANYRAITNLKRQFPQLRVFLTV 292
++ + +LD+ HAN+R KR+ QL F +
Sbjct: 17 EVTKVGSHLDVSATHANFRFSLERKRKRKQLLDFFAL 53
>SB_42154| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 25.4 bits (53), Expect = 9.5
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +2
Query: 50 LCYYDSKSYIRESQARMLPTDLEPALSFCTHLLYKSAGIQADTYKMVSLNE 202
+ Y+DS S++ A +L E +FC L++ G TY S+ E
Sbjct: 314 IAYFDSHSHMANHGALVLLCATENMRTFC-EALWRYEGFNKSTYGNFSMVE 363
>SB_35620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +3
Query: 162 ASKLTHIKWFHSMRIWTLIGRTLIIERSQT*KDSFLNC 275
A+ L + ++ +W L+G L + KDS++NC
Sbjct: 139 ANNLHGVDYYVKKVVWDLMGEVLGYKSYHGEKDSWINC 176
>SB_35570| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 663
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 12 PTTQHHLVAKA-KSSATMTARAISENLKHVC 101
PT H V + + S+T+T IS+N K +C
Sbjct: 631 PTYDEHRVKRVLELSSTITVTKISQNHKQIC 661
>SB_52413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 838
Score = 25.4 bits (53), Expect = 9.5
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +3
Query: 36 AKAKSSATMTARAISENLKHVCCLRTWSLLFRSAPICCTNLP-ASKLTHIKWFHSM 200
++ S +T R +SEN H C + +L + I CT P A+ L ++ H +
Sbjct: 619 SRLDKSIGVTERFLSENSFHTCNVFCANLFRNTNYIACTFPPTAASLANLSGSHPL 674
>SB_27578| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 88 SSTYAAYGLGACSFVLHPSAVQICRHPS 171
++ Y A+ GA +V HP+ VQ HP+
Sbjct: 121 NAQYVAHPNGA-QYVTHPNGVQFVTHPN 147
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,573,814
Number of Sequences: 59808
Number of extensions: 173451
Number of successful extensions: 542
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 538
length of database: 16,821,457
effective HSP length: 71
effective length of database: 12,575,089
effective search space used: 389827759
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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