Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_B23
         (310 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42835-2|AAA83586.1|  617|Caenorhabditis elegans Chitinase prote...    43   5e-05
Z70035-12|CAB76726.1|  150|Caenorhabditis elegans Hypothetical p...    36   0.008
Z70035-8|CAA93868.2|  446|Caenorhabditis elegans Hypothetical pr...    35   0.013
U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical pr...    31   0.22 
AL132862-5|CAB70227.1|  419|Caenorhabditis elegans Hypothetical ...    29   0.66 
AL132862-4|CAB60533.1|  420|Caenorhabditis elegans Hypothetical ...    29   0.66 
U97407-3|AAM15558.1| 1069|Caenorhabditis elegans Nompa homolog (...    28   1.5  
U97407-2|AAB52479.2| 1065|Caenorhabditis elegans Nompa homolog (...    28   1.5  
Z70035-6|CAA93866.1|  444|Caenorhabditis elegans Hypothetical pr...    27   2.7  
AL110490-9|CAB54453.2|  607|Caenorhabditis elegans Hypothetical ...    27   2.7  
AF039650-1|AAC14022.3|  607|Caenorhabditis elegans acetylcholine...    27   2.7  
AC006696-8|AAF39989.1|  120|Caenorhabditis elegans Hypothetical ...    27   2.7  
AL110490-8|CAB54444.2|  602|Caenorhabditis elegans Hypothetical ...    26   4.7  
AF038619-5|AAB92078.6| 1262|Caenorhabditis elegans Gut on exteri...    26   4.7  
AF025379-1|AAC14017.1|  602|Caenorhabditis elegans acetylcholine...    26   4.7  
AB073209-1|BAB70472.1| 1262|Caenorhabditis elegans rac effector ...    26   4.7  
Z81527-12|CAB04277.2|  487|Caenorhabditis elegans Hypothetical p...    26   6.2  
Z70035-7|CAA93867.1|  369|Caenorhabditis elegans Hypothetical pr...    26   6.2  
Z35719-2|CAA84799.2|  715|Caenorhabditis elegans Hypothetical pr...    26   6.2  
Z93387-2|CAB07650.1|  763|Caenorhabditis elegans Hypothetical pr...    25   8.1  

>U42835-2|AAA83586.1|  617|Caenorhabditis elegans Chitinase protein
           1 protein.
          Length = 617

 Score = 42.7 bits (96), Expect = 5e-05
 Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
 Frame = +2

Query: 53  CYYDSKSYIRESQARMLPTDLEPALSFCTHLLYKSAGIQADTYKMVSLNENLDIDRA-HA 229
           CY+ + +  R+ +A+ +P D  P L  CTH+L+    + AD         +L  D A   
Sbjct: 57  CYFTNWAQYRQGRAKFVPEDYTPGL--CTHILFAFGWMNADYTVRAYDPADLPNDWAGEG 114

Query: 230 NYRAITNLKRQFPQLRVFLTVGG 298
            YR +  LK    QL+  L+ GG
Sbjct: 115 MYRRVNKLKVTDTQLKTLLSFGG 137


>Z70035-12|CAB76726.1|  150|Caenorhabditis elegans Hypothetical
           protein R09D1.14 protein.
          Length = 150

 Score = 35.5 bits (78), Expect = 0.008
 Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
 Frame = +2

Query: 2   LAATNHPASPSSQSKVLCYYDSKSYIRESQARMLPTDLEPALSFCTHLLYKSAGIQADTY 181
           +AA+ +PA+P    +++ YY +      +Q  ++ +D    +S  TH ++    I +D  
Sbjct: 30  VAASTYPATPGCNKRIIGYYFA------TQTSVITSD---QVSNLTHAVFAFVNITSDGQ 80

Query: 182 KMVSLNENLDIDRAHANYRAITNL-KRQFPQLRVFLTVGGDDDT 310
             +      D D A   +  +  + K+Q PQ++V +++GG+D++
Sbjct: 81  LQI------DGDLAKNRFTNLIEIAKQQTPQVKVMISIGGNDNS 118


>Z70035-8|CAA93868.2|  446|Caenorhabditis elegans Hypothetical
           protein R09D1.8 protein.
          Length = 446

 Score = 34.7 bits (76), Expect = 0.013
 Identities = 24/104 (23%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
 Frame = +2

Query: 2   LAATNHPASPSSQSKVLCYYDSKSYIRESQARMLPTDLEPALSFCTHLLYKSAGIQADTY 181
           +AA+ +PA+P    +++ YY +      +Q  ++  D    +S  TH ++    + +D +
Sbjct: 72  VAASTYPATPGCNKRIIGYYFA------TQTSVITRD---QVSKLTHAVFAFVNMTSDGH 122

Query: 182 KMVSLNENLDIDRAHANYRAITNL-KRQFPQLRVFLTVGGDDDT 310
             +      D D A   +  +  + K+Q PQ++V +++GG+D++
Sbjct: 123 LQI------DGDLAKNRFTNLIEIAKQQTPQVKVMISIGGNDNS 160


>U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical
           protein C25A8.4 protein.
          Length = 1067

 Score = 30.7 bits (66), Expect = 0.22
 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
 Frame = +2

Query: 89  QARMLPTDLEPALSFCTHLLYKSAGIQADT----YKMVSLNENLDIDRAHANYRAITNLK 256
           + R+ P  L+  ++ CTHL+Y S  I  DT    Y +  +    DID    N R    L+
Sbjct: 37  KTRLSPNLLQN-ITTCTHLVYGSIPIDRDTGYPQYSVSDVESGYDID----NIRTFMRLR 91

Query: 257 RQFPQLRVFLTV 292
           +  P  ++ + V
Sbjct: 92  KYHPNAKLLMGV 103


>AL132862-5|CAB70227.1|  419|Caenorhabditis elegans Hypothetical
           protein Y73F8A.9 protein.
          Length = 419

 Score = 29.1 bits (62), Expect = 0.66
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 176 CQLGCRQICTADGCRTKEQAPSP 108
           CQ  C+Q C    C T+  AP+P
Sbjct: 103 CQSSCQQTCQTSSCYTQIAAPAP 125


>AL132862-4|CAB60533.1|  420|Caenorhabditis elegans Hypothetical
           protein Y73F8A.8 protein.
          Length = 420

 Score = 29.1 bits (62), Expect = 0.66
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 176 CQLGCRQICTADGCRTKEQAPSP 108
           CQ  C+Q C    C T+  AP+P
Sbjct: 104 CQSSCQQTCQTSSCYTQIAAPAP 126


>U97407-3|AAM15558.1| 1069|Caenorhabditis elegans Nompa homolog
           (drosophila nompa:no mechanoreceptor potential a)
           protein 1, isoform b protein.
          Length = 1069

 Score = 27.9 bits (59), Expect = 1.5
 Identities = 20/59 (33%), Positives = 28/59 (47%)
 Frame = +2

Query: 131 FCTHLLYKSAGIQADTYKMVSLNENLDIDRAHANYRAITNLKRQFPQLRVFLTVGGDDD 307
           F  +L  K  GI A  YK+VSLN  L++   +    A  N  R+     +F  +  DDD
Sbjct: 511 FSRYLHTKQRGIPAKVYKVVSLNSCLEVCAGNPTC-AGANYNRRLGDCTLFDAI--DDD 566


>U97407-2|AAB52479.2| 1065|Caenorhabditis elegans Nompa homolog
           (drosophila nompa:no mechanoreceptor potential a)
           protein 1, isoform a protein.
          Length = 1065

 Score = 27.9 bits (59), Expect = 1.5
 Identities = 20/59 (33%), Positives = 28/59 (47%)
 Frame = +2

Query: 131 FCTHLLYKSAGIQADTYKMVSLNENLDIDRAHANYRAITNLKRQFPQLRVFLTVGGDDD 307
           F  +L  K  GI A  YK+VSLN  L++   +    A  N  R+     +F  +  DDD
Sbjct: 507 FSRYLHTKQRGIPAKVYKVVSLNSCLEVCAGNPTC-AGANYNRRLGDCTLFDAI--DDD 562


>Z70035-6|CAA93866.1|  444|Caenorhabditis elegans Hypothetical
           protein R09D1.6 protein.
          Length = 444

 Score = 27.1 bits (57), Expect = 2.7
 Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 4/40 (10%)
 Frame = +2

Query: 203 NLDIDRAHANYRAITNL----KRQFPQLRVFLTVGGDDDT 310
           +L ID   A  R  TNL    K+Q PQ++V +++GG+D++
Sbjct: 120 HLQIDGDLAKNR-FTNLIEIAKQQTPQVKVMISIGGNDNS 158


>AL110490-9|CAB54453.2|  607|Caenorhabditis elegans Hypothetical
           protein Y48B6A.8 protein.
          Length = 607

 Score = 27.1 bits (57), Expect = 2.7
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -2

Query: 198 LSETILYVSAWMPADLYS 145
           +SE  LYV+ W PAD Y+
Sbjct: 116 VSEDCLYVNIWAPADAYN 133


>AF039650-1|AAC14022.3|  607|Caenorhabditis elegans
           acetylcholinesterase protein.
          Length = 607

 Score = 27.1 bits (57), Expect = 2.7
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -2

Query: 198 LSETILYVSAWMPADLYS 145
           +SE  LYV+ W PAD Y+
Sbjct: 116 VSEDCLYVNIWAPADAYN 133


>AC006696-8|AAF39989.1|  120|Caenorhabditis elegans Hypothetical
           protein W08E12.2 protein.
          Length = 120

 Score = 27.1 bits (57), Expect = 2.7
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -3

Query: 152 CTADGCRTKEQAPSP*AAYVLEIL*YSSCCHSSRGLCFGY 33
           C+ + C     AP    +Y      YSSCC+S+   C GY
Sbjct: 65  CSCNPCNGGGCAPR--CSYCPNNFGYSSCCNSNNFSCCGY 102


>AL110490-8|CAB54444.2|  602|Caenorhabditis elegans Hypothetical
           protein Y48B6A.7 protein.
          Length = 602

 Score = 26.2 bits (55), Expect = 4.7
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 198 LSETILYVSAWMPADLYS 145
           +SE  LY++ W PAD Y+
Sbjct: 111 ISEDCLYLNIWAPADAYN 128


>AF038619-5|AAB92078.6| 1262|Caenorhabditis elegans Gut on exterior
           protein 2 protein.
          Length = 1262

 Score = 26.2 bits (55), Expect = 4.7
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
 Frame = +3

Query: 33  VAKAKSSATMTAR---AISENLKHVCCLRTWSLLFRSAPICCTN 155
           +AK    AT  A+    +SE L+H   + TW    R+ P+  +N
Sbjct: 56  IAKYSEEATRHAQFNDMLSEGLQHAANMYTWRCCSRAVPMAKSN 99


>AF025379-1|AAC14017.1|  602|Caenorhabditis elegans
           acetylcholinesterase protein.
          Length = 602

 Score = 26.2 bits (55), Expect = 4.7
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 198 LSETILYVSAWMPADLYS 145
           +SE  LY++ W PAD Y+
Sbjct: 111 ISEDCLYLNIWAPADAYN 128


>AB073209-1|BAB70472.1| 1262|Caenorhabditis elegans rac effector
           protein.
          Length = 1262

 Score = 26.2 bits (55), Expect = 4.7
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
 Frame = +3

Query: 33  VAKAKSSATMTAR---AISENLKHVCCLRTWSLLFRSAPICCTN 155
           +AK    AT  A+    +SE L+H   + TW    R+ P+  +N
Sbjct: 56  IAKYSEEATRHAQFNDMLSEGLQHAANMYTWRCCSRAVPMAKSN 99


>Z81527-12|CAB04277.2|  487|Caenorhabditis elegans Hypothetical
           protein F35E12.10 protein.
          Length = 487

 Score = 25.8 bits (54), Expect = 6.2
 Identities = 8/30 (26%), Positives = 19/30 (63%)
 Frame = +2

Query: 26  SPSSQSKVLCYYDSKSYIRESQARMLPTDL 115
           SP+ + + L  YD+++Y      +++PT++
Sbjct: 306 SPTHKKETLIQYDAQTYTSSQMPQVIPTNM 335


>Z70035-7|CAA93867.1|  369|Caenorhabditis elegans Hypothetical
           protein R09D1.7 protein.
          Length = 369

 Score = 25.8 bits (54), Expect = 6.2
 Identities = 8/19 (42%), Positives = 16/19 (84%)
 Frame = +2

Query: 254 KRQFPQLRVFLTVGGDDDT 310
           K+Q P ++V +++GGDD++
Sbjct: 65  KQQTPPVKVMISIGGDDNS 83


>Z35719-2|CAA84799.2|  715|Caenorhabditis elegans Hypothetical
           protein F17C8.3 protein.
          Length = 715

 Score = 25.8 bits (54), Expect = 6.2
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +2

Query: 14  NHPASPSSQSKVLCYYDSKSYIRESQARMLPTDL 115
           N+PA P + +  L YY   S I+ES+ + +   L
Sbjct: 681 NNPAKPGAVTGQLTYYSFLSSIKESRYKPIGVQL 714


>Z93387-2|CAB07650.1|  763|Caenorhabditis elegans Hypothetical
           protein T02E9.3 protein.
          Length = 763

 Score = 25.4 bits (53), Expect = 8.1
 Identities = 20/69 (28%), Positives = 27/69 (39%), Gaps = 1/69 (1%)
 Frame = -2

Query: 303 SSPPTVKNTRN*G-NCLFKFVIAR*LACARSMSKFSLSETILYVSAWMPADLYSRWVQNE 127
           ++PP   NT+    NC     + R   C    S  S S    Y SA   +D Y R   N 
Sbjct: 522 NTPPATPNTKEAPTNCTSLLQVPRLFDCPSPCSVPSNSSHSSYTSASGSSDTYRRISMNS 581

Query: 126 RAGSKSVGS 100
              S + G+
Sbjct: 582 YGSSLTDGT 590


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,997,418
Number of Sequences: 27780
Number of extensions: 124890
Number of successful extensions: 356
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 356
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 333802358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)