Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_B22
(457 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces pombe... 27 1.4
SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomy... 27 1.4
SPAC1002.03c |gls2||glucosidase II Gls2|Schizosaccharomyces pomb... 26 2.4
SPAC1782.08c |rex3||exonuclease Rex3 |Schizosaccharomyces pombe|... 26 3.1
SPAC1F7.11c |||transcription factor zf-fungal binuclear cluster ... 25 4.2
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 25 4.2
SPBP8B7.21 |ubp3||ubiquitin C-terminal hydrolase Ubp3|Schizosacc... 25 5.5
SPCP1E11.06 |apl4||AP-1 adaptor complex gamma subunit Apl4 |Schi... 25 5.5
SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces po... 25 5.5
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 25 7.3
SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces pom... 25 7.3
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 24 9.6
>SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 871
Score = 27.1 bits (57), Expect = 1.4
Identities = 15/78 (19%), Positives = 41/78 (52%)
Frame = +2
Query: 218 QSLISPKGSSIWTMEELDEAIKDPSTNPNYLPAITESYRYLKSTHEHGNKPENSIKVYVR 397
+ ++S + S T+ +++ A+++ ST+ + P + Y++ N+P +S+ V +
Sbjct: 190 KKVLSAEDSVRETITDIETALQNMSTSASRTPNDSSPLPYIE------NRPASSLAVSEK 243
Query: 398 AMDISTWTLADLNEAIAN 451
++ W+ ++ E + N
Sbjct: 244 IQNVPNWSTEEVVEWLMN 261
>SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 573
Score = 27.1 bits (57), Expect = 1.4
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 263 ELDEAIKDPSTNPNYLPAITESYRYLKSTHEHGNKPENSIKVY 391
E DE +K+PS + S YL ++ N+PEN K +
Sbjct: 282 EDDELVKNPSVTKGHPEIHESSENYLSRSNTVENEPENIEKQF 324
>SPAC1002.03c |gls2||glucosidase II Gls2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 923
Score = 26.2 bits (55), Expect = 2.4
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +2
Query: 278 IKDPSTNPNYLPAITESYRYLK--STHEHGNKPENSIKV-YVRAMDISTWTLA-DLNEAI 445
+KD +NP P + S ++LK + +G + SIK+ + +++ W ++ D + I
Sbjct: 856 MKDSHSNPPVSPKYSSSQKHLKVERINIYGEQTRKSIKIRKIIDSEVTEWDVSVDDSGCI 915
Query: 446 ANP 454
NP
Sbjct: 916 RNP 918
>SPAC1782.08c |rex3||exonuclease Rex3 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 540
Score = 25.8 bits (54), Expect = 3.1
Identities = 11/47 (23%), Positives = 28/47 (59%)
Frame = +2
Query: 242 SSIWTMEELDEAIKDPSTNPNYLPAITESYRYLKSTHEHGNKPENSI 382
S+ +E+ +++IK+ + N N+ + E+Y+ + H+ + P N++
Sbjct: 96 STTLNLEKTNDSIKE-TKNENFRMDVLETYKCKQLNHQTTHLPTNTV 141
>SPAC1F7.11c |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 1|||Manual
Length = 782
Score = 25.4 bits (53), Expect = 4.2
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +2
Query: 119 DKNFDPELKPYLEEAFNAI----VYSMFTNKNLDLTSQSLISPKGSSIWT 256
D F+ E KP + +++ V S+ TN+ D S S GS+ WT
Sbjct: 723 DMMFEEEQKPIVPIDLSSMQDDQVSSLTTNEEFDPLSSFQASHSGSNFWT 772
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 25.4 bits (53), Expect = 4.2
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +2
Query: 98 ELEKVLHDKNFDPELKPYLEEAFNAI 175
E + K PELKP L EAF I
Sbjct: 531 ERSSISPSKPLSPELKPLLNEAFQDI 556
>SPBP8B7.21 |ubp3||ubiquitin C-terminal hydrolase
Ubp3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 512
Score = 25.0 bits (52), Expect = 5.5
Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +1
Query: 238 RIFYMDDGRTGRSYKRSIYKSKLSACYN*II*VFKE--YP*TRK*T*KFHQSLCSCNGHI 411
R FY G T ++YK Y ++LS N + +P +H + GH
Sbjct: 395 RFFYEASGGTQKNYKPIAYPARLSIPQNVFSPSVRGSIHPEYDLNAVVYHHGTSASGGHY 454
Query: 412 NLDIS*LERS 441
+D+ L++S
Sbjct: 455 TVDVQQLDKS 464
>SPCP1E11.06 |apl4||AP-1 adaptor complex gamma subunit Apl4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 865
Score = 25.0 bits (52), Expect = 5.5
Identities = 16/74 (21%), Positives = 34/74 (45%)
Frame = +2
Query: 83 TWTYDELEKVLHDKNFDPELKPYLEEAFNAIVYSMFTNKNLDLTSQSLISPKGSSIWTME 262
T +D+ + + H + + ++ +EE FN++ S + L + + +S + S T
Sbjct: 519 TMNFDDDQTLPHSVS-ESDIVDIIEEVFNSVEASRYIIVQYGLFALTKLSARLGSSSTAS 577
Query: 263 ELDEAIKDPSTNPN 304
+D+ I N N
Sbjct: 578 RIDKIIYSYKRNKN 591
>SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 851
Score = 25.0 bits (52), Expect = 5.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 95 DELEKVLHDKNFDPELKPYLE 157
D L++V HD D ELK +LE
Sbjct: 303 DTLKQVQHDAENDEELKDWLE 323
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 24.6 bits (51), Expect = 7.3
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 260 EELDEAIKDPSTNPNYLPAITESYRYLKSTHEHGNKP 370
EEL ++I+ T+P+ P I + L EH +KP
Sbjct: 1185 EELVKSIEIALTSPHISPEIIQILLNLAEFMEHDDKP 1221
>SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1125
Score = 24.6 bits (51), Expect = 7.3
Identities = 18/90 (20%), Positives = 37/90 (41%), Gaps = 5/90 (5%)
Frame = +2
Query: 197 KNLDLTSQSLISPKGSSIWTMEELDEAIKDPSTNPNYLPAITESYRYLKSTHE-----HG 361
+ LD+ I + W + ++ E K STN ++ + L + +E HG
Sbjct: 19 EQLDVVESGSIDQQNIRAWVVRKVKENDKRTSTNQSFKWEAVKPASCLDAANEKFMYLHG 78
Query: 362 NKPENSIKVYVRAMDISTWTLADLNEAIAN 451
+ ++ I + +D+ + T+ N N
Sbjct: 79 GREKSGISNSLFKLDLDSCTVYSHNRGEDN 108
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 24.2 bits (50), Expect = 9.6
Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +2
Query: 194 NKNLDLTSQSLISPKGSSIWTMEELDEAIKDPSTNPNYLPAITESYRYLKSTHEHGNKPE 373
N N D T+ +S + S+ T E ++KD ++ + ++ + +S+ K
Sbjct: 318 NSNTDTTTSGEVSAQSSTNSTSSEESTSVKDEDSSKIHDKSLKRKHEDDESS--TSTKSS 375
Query: 374 NSIKV-YVRAMDISTWTLA 427
+ K + R D S W A
Sbjct: 376 RTTKTPFTRVGDPSQWDFA 394
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,739,402
Number of Sequences: 5004
Number of extensions: 32981
Number of successful extensions: 109
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 109
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 170285640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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