Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_B22
         (457 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70783-9|CAA94857.2|  455|Caenorhabditis elegans Hypothetical pr...    29   1.6  
Z37092-3|CAA85454.1|  266|Caenorhabditis elegans Hypothetical pr...    28   2.8  
AF067215-5|AAC17010.3|  441|Caenorhabditis elegans T box family ...    28   3.7  
Z66567-1|CAA91491.1|  887|Caenorhabditis elegans Hypothetical pr...    27   4.9  
U56964-5|AAB54032.1|  454|Caenorhabditis elegans Warthog (hedgeh...    27   4.9  
Z72505-6|CAA96613.2|  358|Caenorhabditis elegans Hypothetical pr...    27   8.6  
U64857-10|AAC25860.1|  265|Caenorhabditis elegans Hypothetical p...    27   8.6  
AF216966-1|AAF23508.1|  358|Caenorhabditis elegans seven transme...    27   8.6  

>Z70783-9|CAA94857.2|  455|Caenorhabditis elegans Hypothetical
           protein ZK856.9 protein.
          Length = 455

 Score = 29.1 bits (62), Expect = 1.6
 Identities = 15/59 (25%), Positives = 26/59 (44%)
 Frame = +2

Query: 230 SPKGSSIWTMEELDEAIKDPSTNPNYLPAITESYRYLKSTHEHGNKPENSIKVYVRAMD 406
           +P+   +   +E  E + D    P  +P IT  +     + E    PE+ IK Y R ++
Sbjct: 6   TPEPKEVEDYQEDGEILDDDDDVPTEIPNITSEFLVNYPSSEDEKSPEDVIKAYKRKIE 64


>Z37092-3|CAA85454.1|  266|Caenorhabditis elegans Hypothetical
           protein F44F4.3 protein.
          Length = 266

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
 Frame = +2

Query: 89  TYDELEKVLHDKNFDPELKPYLEEAFNAIVYSMFTNKNLDLTSQSLISPKG-SSIWTMEE 265
           TY E ++  H + F    +P  +     I   + +    D+T + +   +  SSI  ME 
Sbjct: 31  TYSEDKRAFHSRLFHVFYEPDFKSVAEMIKCQL-SGTVKDVTLEEIQGKRELSSICKMEA 89

Query: 266 LDEAIKDPSTNPNYLPAITESYRY 337
               I+D +   NY+  IT   ++
Sbjct: 90  YTSKIEDKTKQRNYMATITRQLKF 113


>AF067215-5|AAC17010.3|  441|Caenorhabditis elegans T box family
           protein 32 protein.
          Length = 441

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 18/87 (20%), Positives = 32/87 (36%)
 Frame = +2

Query: 98  ELEKVLHDKNFDPELKPYLEEAFNAIVYSMFTNKNLDLTSQSLISPKGSSIWTMEELDEA 277
           E   ++ DK  D       +  FN +      ++    T   L      + W  E ++ +
Sbjct: 356 EKSSIVRDKKNDENCLDEFDRVFNEL------DQQFTPTENQLQDLSNCTTWNQEPINNS 409

Query: 278 IKDPSTNPNYLPAITESYRYLKSTHEH 358
           I+    N N  PA+ E+     +  EH
Sbjct: 410 IQSNQLNNNIAPALEENVEDDNAIFEH 436


>Z66567-1|CAA91491.1|  887|Caenorhabditis elegans Hypothetical
           protein ZK455.1 protein.
          Length = 887

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
 Frame = +2

Query: 119 DKNFDPELKP-----YLEEAFNAIVYSMFTNKNLDLTSQSLISPKGSSI 250
           ++NF+  + P     YL     A++YS+  N N+D+     ++P G  I
Sbjct: 534 NRNFEGRIHPHVRANYLASPPLAVLYSIIGNVNVDINGVLAVTPDGKEI 582


>U56964-5|AAB54032.1|  454|Caenorhabditis elegans Warthog
           (hedgehog-like family)protein 2 protein.
          Length = 454

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +2

Query: 269 DEAIKDPSTNPNYLPAITE-SYRYLKSTHEHG 361
           D+ IK PS NPN++P +   +  Y   T E G
Sbjct: 77  DQFIKSPSKNPNFVPQLAICTDEYKSKTCEEG 108


>Z72505-6|CAA96613.2|  358|Caenorhabditis elegans Hypothetical
           protein C50C10.7 protein.
          Length = 358

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 14/54 (25%), Positives = 23/54 (42%)
 Frame = -1

Query: 283 FYSFVQFFHRPYRRSFRGNEALAS*IQIFISKHRVNDCVECLL*VWFQFRIKVF 122
           FY+FV  F  P+  ++     +   +  F   H V   + CL    F F + +F
Sbjct: 56  FYAFVNLFAGPFVHTYGSAFIVFQDMNTFYFSHHVAQFLVCLYCSCFGFSMAIF 109


>U64857-10|AAC25860.1|  265|Caenorhabditis elegans Hypothetical
           protein C37C3.3 protein.
          Length = 265

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 16/67 (23%), Positives = 32/67 (47%)
 Frame = +2

Query: 254 TMEELDEAIKDPSTNPNYLPAITESYRYLKSTHEHGNKPENSIKVYVRAMDISTWTLADL 433
           T+E   E +++ STN   L  +  +   LK+   H N   + ++  +  +D       ++
Sbjct: 134 TLEHQRETLENASTNAEVLTVMKLASDALKAV--HNNMDSDQVRDMMDNIDEQREVAKEI 191

Query: 434 NEAIANP 454
            +AI+NP
Sbjct: 192 ADAISNP 198


>AF216966-1|AAF23508.1|  358|Caenorhabditis elegans seven
           transmembrane receptor 2 protein.
          Length = 358

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 14/54 (25%), Positives = 23/54 (42%)
 Frame = -1

Query: 283 FYSFVQFFHRPYRRSFRGNEALAS*IQIFISKHRVNDCVECLL*VWFQFRIKVF 122
           FY+FV  F  P+  ++     +   +  F   H V   + CL    F F + +F
Sbjct: 56  FYAFVNLFAGPFVHTYGSAFIVFQDMNTFYFSHHVAQFLVCLYCSCFGFSMAIF 109


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,393,358
Number of Sequences: 27780
Number of extensions: 175462
Number of successful extensions: 545
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 545
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)