Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_B21
(416 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC034502-1|AAH34502.1| 594|Homo sapiens choline dehydrogenase p... 88 1e-17
AJ272267-1|CAB75961.1| 482|Homo sapiens choline dehydrogenase p... 59 5e-09
BC017033-1|AAH17033.1| 574|Homo sapiens squalene epoxidase prot... 30 3.6
AF098865-1|AAD10823.1| 574|Homo sapiens squalene epoxidase prot... 30 3.6
BC023601-1|AAH23601.1| 373|Homo sapiens AIFM2 protein protein. 29 4.7
BC006121-1|AAH06121.1| 373|Homo sapiens apoptosis-inducing fact... 29 4.7
AL731540-3|CAI13684.1| 373|Homo sapiens apoptosis-inducing fact... 29 4.7
AK027403-1|BAB55089.1| 373|Homo sapiens protein ( Homo sapiens ... 29 4.7
AF506757-1|AAM77596.1| 373|Homo sapiens AMID protein protein. 29 4.7
AF337957-1|AAL73229.1| 373|Homo sapiens p53-responsive gene 3 p... 29 4.7
X65551-1|CAA46520.1| 2896|Homo sapiens antigen of the monoclonal... 29 8.2
X65550-1|CAA46519.1| 3256|Homo sapiens antigen of the monoclonal... 29 8.2
AL390236-2|CAH73170.1| 2896|Homo sapiens antigen identified by m... 29 8.2
AL390236-1|CAH73169.1| 3256|Homo sapiens antigen identified by m... 29 8.2
AL355529-2|CAI16903.1| 2896|Homo sapiens antigen identified by m... 29 8.2
AL355529-1|CAI16902.1| 3256|Homo sapiens antigen identified by m... 29 8.2
>BC034502-1|AAH34502.1| 594|Homo sapiens choline dehydrogenase
protein.
Length = 594
Score = 87.8 bits (208), Expect = 1e-17
Identities = 55/146 (37%), Positives = 78/146 (53%), Gaps = 11/146 (7%)
Frame = +2
Query: 2 YVIIGGGTAGSVLAARLSEEKPKAMVLVIEAGKPEMLLSD--------VPA-LAHNLQLT 154
YV++G G+AG VLA RL+E+ P VL++EAG ++ +PA L NL
Sbjct: 43 YVVVGAGSAGCVLAGRLTED-PAERVLLLEAGPKDVRAGSKRLSWKIHMPAALVANLCDD 101
Query: 155 DYAWPYTMEHQPGVCLGSDEQRCYWPRGKALGGSSVTNFMLYTRGRPQDWNKIAADGNYG 334
Y W Y E Q G+ D + YWPRG+ GGSS N M+Y RG +D+ + G G
Sbjct: 102 RYNWCYHTEVQRGL----DGRVLYWPRGRVWGGSSSLNAMVYVRGHAEDYERWQRQGARG 157
Query: 335 WSHDEVLKYYMKSERSEL--RKYKNA 406
W + L Y+ K++ EL +Y+ A
Sbjct: 158 WDYAHCLPYFRKAQGHELGASRYRGA 183
>AJ272267-1|CAB75961.1| 482|Homo sapiens choline dehydrogenase
protein.
Length = 482
Score = 59.3 bits (137), Expect = 5e-09
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +2
Query: 203 GSDEQRCYWPRGKALGGSSVTNFMLYTRGRPQDWNKIAADGNYGWSHDEVLKYYMKSERS 382
G D + YWPRG+ GGSS N M+Y RG +D+ + G GW + L Y+ K++
Sbjct: 2 GLDGRVLYWPRGRVWGGSSSLNAMVYVRGHAEDYERWQRQGARGWDYAHCLPYFRKAQGH 61
Query: 383 EL--RKYKNA 406
EL +Y+ A
Sbjct: 62 ELGASRYRGA 71
>BC017033-1|AAH17033.1| 574|Homo sapiens squalene epoxidase
protein.
Length = 574
Score = 29.9 bits (64), Expect = 3.6
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2
Query: 5 VIIGGGTAGSVLAARLSEEKPKAMVLVIEAGKPEMLLSD 121
+I+G G GS LAA LS + K V+ + +P+ ++ +
Sbjct: 127 IIVGAGVLGSALAAVLSRDGRKVTVIERDLKEPDRIVGE 165
>AF098865-1|AAD10823.1| 574|Homo sapiens squalene epoxidase
protein.
Length = 574
Score = 29.9 bits (64), Expect = 3.6
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2
Query: 5 VIIGGGTAGSVLAARLSEEKPKAMVLVIEAGKPEMLLSD 121
+I+G G GS LAA LS + K V+ + +P+ ++ +
Sbjct: 127 IIVGAGVLGSALAAVLSRDGRKVTVIERDLKEPDRIVGE 165
>BC023601-1|AAH23601.1| 373|Homo sapiens AIFM2 protein protein.
Length = 373
Score = 29.5 bits (63), Expect = 4.7
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 5 VIIGGGTAGSVLAARLSEEKPKAMVLVIEA 94
V++GGG+AG +AA + E P+ V +I +
Sbjct: 146 VVVGGGSAGVEMAAEIKTEYPEKEVTLIHS 175
>BC006121-1|AAH06121.1| 373|Homo sapiens apoptosis-inducing factor,
mitochondrion-associated, 2 protein.
Length = 373
Score = 29.5 bits (63), Expect = 4.7
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 5 VIIGGGTAGSVLAARLSEEKPKAMVLVIEA 94
V++GGG+AG +AA + E P+ V +I +
Sbjct: 146 VVVGGGSAGVEMAAEIKTEYPEKEVTLIHS 175
>AL731540-3|CAI13684.1| 373|Homo sapiens apoptosis-inducing factor,
mitochondrion-associated, 2 protein.
Length = 373
Score = 29.5 bits (63), Expect = 4.7
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 5 VIIGGGTAGSVLAARLSEEKPKAMVLVIEA 94
V++GGG+AG +AA + E P+ V +I +
Sbjct: 146 VVVGGGSAGVEMAAEIKTEYPEKEVTLIHS 175
>AK027403-1|BAB55089.1| 373|Homo sapiens protein ( Homo sapiens
cDNA FLJ14497 fis, clone NT2RM1000039. ).
Length = 373
Score = 29.5 bits (63), Expect = 4.7
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 5 VIIGGGTAGSVLAARLSEEKPKAMVLVIEA 94
V++GGG+AG +AA + E P+ V +I +
Sbjct: 146 VVVGGGSAGVEMAAEIKTEYPEKEVTLIHS 175
>AF506757-1|AAM77596.1| 373|Homo sapiens AMID protein protein.
Length = 373
Score = 29.5 bits (63), Expect = 4.7
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 5 VIIGGGTAGSVLAARLSEEKPKAMVLVIEA 94
V++GGG+AG +AA + E P+ V +I +
Sbjct: 146 VVVGGGSAGVEMAAEIKTEYPEKEVTLIHS 175
>AF337957-1|AAL73229.1| 373|Homo sapiens p53-responsive gene 3
protein.
Length = 373
Score = 29.5 bits (63), Expect = 4.7
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 5 VIIGGGTAGSVLAARLSEEKPKAMVLVIEA 94
V++GGG+AG +AA + E P+ V +I +
Sbjct: 146 VVVGGGSAGVEMAAEIKTEYPEKEVTLIHS 175
>X65551-1|CAA46520.1| 2896|Homo sapiens antigen of the monoclonal
antibody Ki-67 protein.
Length = 2896
Score = 28.7 bits (61), Expect = 8.2
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 243 LWEVPVLPTSCYTLEAVLKIGIKSPPMETMDGPTT 347
L++ P T E KI KSPP E++D PT+
Sbjct: 748 LFQTPGPSEESMTDEKTTKIACKSPPPESVDTPTS 782
Score = 28.7 bits (61), Expect = 8.2
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 243 LWEVPVLPTSCYTLEAVLKIGIKSPPMETMDGPTT 347
L++ P T + KI KSPP E+MD PT+
Sbjct: 1722 LFQTPDHTEESTTDDKTTKIACKSPPPESMDTPTS 1756
>X65550-1|CAA46519.1| 3256|Homo sapiens antigen of the monoclonal
antibody Ki-67 protein.
Length = 3256
Score = 28.7 bits (61), Expect = 8.2
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 243 LWEVPVLPTSCYTLEAVLKIGIKSPPMETMDGPTT 347
L++ P T E KI KSPP E++D PT+
Sbjct: 1108 LFQTPGPSEESMTDEKTTKIACKSPPPESVDTPTS 1142
Score = 28.7 bits (61), Expect = 8.2
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 243 LWEVPVLPTSCYTLEAVLKIGIKSPPMETMDGPTT 347
L++ P T + KI KSPP E+MD PT+
Sbjct: 2082 LFQTPDHTEESTTDDKTTKIACKSPPPESMDTPTS 2116
>AL390236-2|CAH73170.1| 2896|Homo sapiens antigen identified by
monoclonal antibody Ki-67 protein.
Length = 2896
Score = 28.7 bits (61), Expect = 8.2
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 243 LWEVPVLPTSCYTLEAVLKIGIKSPPMETMDGPTT 347
L++ P T E KI KSPP E++D PT+
Sbjct: 748 LFQTPGPSEESMTDEKTTKIACKSPPPESVDTPTS 782
Score = 28.7 bits (61), Expect = 8.2
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 243 LWEVPVLPTSCYTLEAVLKIGIKSPPMETMDGPTT 347
L++ P T + KI KSPP E+MD PT+
Sbjct: 1722 LFQTPDHTEESTTDDKTTKIACKSPPPESMDTPTS 1756
>AL390236-1|CAH73169.1| 3256|Homo sapiens antigen identified by
monoclonal antibody Ki-67 protein.
Length = 3256
Score = 28.7 bits (61), Expect = 8.2
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 243 LWEVPVLPTSCYTLEAVLKIGIKSPPMETMDGPTT 347
L++ P T E KI KSPP E++D PT+
Sbjct: 1108 LFQTPGPSEESMTDEKTTKIACKSPPPESVDTPTS 1142
Score = 28.7 bits (61), Expect = 8.2
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 243 LWEVPVLPTSCYTLEAVLKIGIKSPPMETMDGPTT 347
L++ P T + KI KSPP E+MD PT+
Sbjct: 2082 LFQTPDHTEESTTDDKTTKIACKSPPPESMDTPTS 2116
>AL355529-2|CAI16903.1| 2896|Homo sapiens antigen identified by
monoclonal antibody Ki-67 protein.
Length = 2896
Score = 28.7 bits (61), Expect = 8.2
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 243 LWEVPVLPTSCYTLEAVLKIGIKSPPMETMDGPTT 347
L++ P T E KI KSPP E++D PT+
Sbjct: 748 LFQTPGPSEESMTDEKTTKIACKSPPPESVDTPTS 782
Score = 28.7 bits (61), Expect = 8.2
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 243 LWEVPVLPTSCYTLEAVLKIGIKSPPMETMDGPTT 347
L++ P T + KI KSPP E+MD PT+
Sbjct: 1722 LFQTPDHTEESTTDDKTTKIACKSPPPESMDTPTS 1756
>AL355529-1|CAI16902.1| 3256|Homo sapiens antigen identified by
monoclonal antibody Ki-67 protein.
Length = 3256
Score = 28.7 bits (61), Expect = 8.2
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 243 LWEVPVLPTSCYTLEAVLKIGIKSPPMETMDGPTT 347
L++ P T E KI KSPP E++D PT+
Sbjct: 1108 LFQTPGPSEESMTDEKTTKIACKSPPPESVDTPTS 1142
Score = 28.7 bits (61), Expect = 8.2
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 243 LWEVPVLPTSCYTLEAVLKIGIKSPPMETMDGPTT 347
L++ P T + KI KSPP E+MD PT+
Sbjct: 2082 LFQTPDHTEESTTDDKTTKIACKSPPPESMDTPTS 2116
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,221,898
Number of Sequences: 237096
Number of extensions: 1545389
Number of successful extensions: 3106
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3103
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3144905170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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