Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_B21
(416 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66494-4|CAA91263.1| 599|Caenorhabditis elegans Hypothetical pr... 91 3e-19
AC006768-1|AAF60576.2| 433|Caenorhabditis elegans Hypothetical ... 31 0.44
Z22181-9|CAA80186.1| 453|Caenorhabditis elegans Hypothetical pr... 28 2.4
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 28 3.1
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z73427-4|CAA97802.3| 601|Caenorhabditis elegans Hypothetical pr... 27 4.1
AL008866-1|CAA15509.3| 724|Caenorhabditis elegans Hypothetical ... 27 4.1
Z49909-15|CAF31470.1| 697|Caenorhabditis elegans Hypothetical p... 27 7.2
Z49909-14|CAA90116.2| 717|Caenorhabditis elegans Hypothetical p... 27 7.2
U64848-13|AAY86245.1| 339|Caenorhabditis elegans Hypothetical p... 27 7.2
AL117203-5|CAB55107.1| 291|Caenorhabditis elegans Hypothetical ... 27 7.2
Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical pr... 26 9.5
U00041-1|AAA50671.3| 2248|Caenorhabditis elegans Abnormal cell l... 26 9.5
AY390551-1|AAQ94963.1| 926|Caenorhabditis elegans SMA-9 class I... 26 9.5
AL132860-26|CAB60511.2| 700|Caenorhabditis elegans Hypothetical... 26 9.5
AF245435-1|AAF87497.1| 2248|Caenorhabditis elegans zinc finger p... 26 9.5
>Z66494-4|CAA91263.1| 599|Caenorhabditis elegans Hypothetical
protein C34C6.4 protein.
Length = 599
Score = 91.1 bits (216), Expect = 3e-19
Identities = 56/142 (39%), Positives = 76/142 (53%), Gaps = 4/142 (2%)
Frame = +2
Query: 2 YVIIGGGTAGSVLAARLSEEKPKAMVLVIEAG----KPEMLLSDVPALAHNLQLTDYAWP 169
++I+G G+AG VLA RL+E+ P VL+IEAG K + + AL +NL Y W
Sbjct: 40 HIIVGAGSAGCVLANRLTED-PSNRVLLIEAGPVDHKWDWRIHMPAALMYNLCSDTYNWH 98
Query: 170 YTMEHQPGVCLGSDEQRCYWPRGKALGGSSVTNFMLYTRGRPQDWNKIAADGNYGWSHDE 349
Y Q LG+ + YWPRG+ GGSS N M Y RG D+N+ +G GW++
Sbjct: 99 YHTTAQKN--LGN--RVFYWPRGRVWGGSSTLNAMCYVRGHAYDYNRWEKEGASGWNYAN 154
Query: 350 VLKYYMKSERSELRKYKNAPYR 415
L Y+ K+E N PYR
Sbjct: 155 CLPYFKKAETYSDATGPNDPYR 176
>AC006768-1|AAF60576.2| 433|Caenorhabditis elegans Hypothetical
protein Y45G12B.3 protein.
Length = 433
Score = 30.7 bits (66), Expect = 0.44
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +2
Query: 5 VIIGGGTAGSVLAARLSEEKPKAMVLVIEAGK 100
VI+GGG G A +L EKP+ V +IE K
Sbjct: 29 VIVGGGIVGCATARQLLIEKPQLKVALIEKEK 60
>Z22181-9|CAA80186.1| 453|Caenorhabditis elegans Hypothetical
protein ZK632.11 protein.
Length = 453
Score = 28.3 bits (60), Expect = 2.4
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +2
Query: 344 DEVLKYYMKSERSELRKYKNAP 409
DE+LK + KSE++E R+ K+ P
Sbjct: 270 DELLKIFKKSEKAEKRRAKSTP 291
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 27.9 bits (59), Expect = 3.1
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = +2
Query: 47 RLSEEKPKAMVLVIEAGKPEMLLSDVPALAHNLQLTDYAWPYTMEH 184
R + + K V+ E + +D P HN + Y W Y ++H
Sbjct: 406 RFTLDSKKQRVMYNYLVPQETIAADFPQFNHNYEQKPYQWGYLVQH 451
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 27.9 bits (59), Expect = 3.1
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = +2
Query: 47 RLSEEKPKAMVLVIEAGKPEMLLSDVPALAHNLQLTDYAWPYTMEH 184
R + + K V+ E + +D P HN + Y W Y ++H
Sbjct: 406 RFTLDSKKQRVMYNYLVPQETIAADFPQFNHNYEQKPYQWGYLVQH 451
>Z73427-4|CAA97802.3| 601|Caenorhabditis elegans Hypothetical
protein F58B3.4 protein.
Length = 601
Score = 27.5 bits (58), Expect = 4.1
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 29 GSVLAARLSEEKPKAMVLVIEAGKPEMLL 115
GS+L + +E+K K VIE KPE L+
Sbjct: 555 GSLLVTKQAEQKSKGSSTVIETKKPEDLV 583
>AL008866-1|CAA15509.3| 724|Caenorhabditis elegans Hypothetical
protein B0019.1 protein.
Length = 724
Score = 27.5 bits (58), Expect = 4.1
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 5 VIIGGGTAGSVLAARLSEEKPKAMVLVIEA 94
+++G G G A + + +P VLV+EA
Sbjct: 49 IVVGAGLTGLTAARNIQQNRPGLSVLVLEA 78
>Z49909-15|CAF31470.1| 697|Caenorhabditis elegans Hypothetical
protein C14A4.12b protein.
Length = 697
Score = 26.6 bits (56), Expect = 7.2
Identities = 16/59 (27%), Positives = 25/59 (42%)
Frame = +2
Query: 179 EHQPGVCLGSDEQRCYWPRGKALGGSSVTNFMLYTRGRPQDWNKIAADGNYGWSHDEVL 355
EH C+ R YW ALG ++ N ++ T +P D + N W + +L
Sbjct: 50 EHVRKYCIQMKNDRKYWYCLLALGALALLNAVVSTMMKPADVTHHVSVINIHWINTIIL 108
>Z49909-14|CAA90116.2| 717|Caenorhabditis elegans Hypothetical
protein C14A4.12a protein.
Length = 717
Score = 26.6 bits (56), Expect = 7.2
Identities = 16/59 (27%), Positives = 25/59 (42%)
Frame = +2
Query: 179 EHQPGVCLGSDEQRCYWPRGKALGGSSVTNFMLYTRGRPQDWNKIAADGNYGWSHDEVL 355
EH C+ R YW ALG ++ N ++ T +P D + N W + +L
Sbjct: 50 EHVRKYCIQMKNDRKYWYCLLALGALALLNAVVSTMMKPADVTHHVSVINIHWINTIIL 108
>U64848-13|AAY86245.1| 339|Caenorhabditis elegans Hypothetical
protein C50E3.15 protein.
Length = 339
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/46 (26%), Positives = 21/46 (45%)
Frame = +2
Query: 113 LSDVPALAHNLQLTDYAWPYTMEHQPGVCLGSDEQRCYWPRGKALG 250
+ + PA +L+ + W +T+ + CL E+ W GK G
Sbjct: 97 VKNCPAPNLSLKTCEEGWKFTLRYNAAYCLKDSEKWGMWIDGKHNG 142
>AL117203-5|CAB55107.1| 291|Caenorhabditis elegans Hypothetical
protein Y48C3A.8 protein.
Length = 291
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -3
Query: 96 PASMTSTIAFGFSSDNRAASTDPAVPPP 13
P + +S + FG SSD++ S PA P
Sbjct: 64 PPTSSSAMPFGMSSDHQPMSAGPAAAAP 91
>Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical protein
T05A10.1i protein.
Length = 1927
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -1
Query: 404 HSCIFL-ALTSLISCNTLKLRRGTIHSFHR 318
H C+F A+TSLIS N T+H F +
Sbjct: 1895 HICVFFKAITSLISANLKSHLINTLHLFSK 1924
>U00041-1|AAA50671.3| 2248|Caenorhabditis elegans Abnormal cell
lineage protein 13 protein.
Length = 2248
Score = 26.2 bits (55), Expect = 9.5
Identities = 34/141 (24%), Positives = 55/141 (39%), Gaps = 6/141 (4%)
Frame = +2
Query: 11 IGGGTAGSVLAARLSEEKPKAMVLVIEAGKPEMLL--SDVPALAHNLQLTDYAWPYTMEH 184
IGG T+G V A SE K V E + LL N +TD + +
Sbjct: 563 IGGLTSGEVQALEASENKKSEFVEPDEYTIRKKLLRWKHAKTKKENRNITD-SNEKEFSY 621
Query: 185 QPGVCLGSDE-QRCYWPRGKALGGSSVTNFML--YTRGRPQDWNKIAADGNYGWSHDEVL 355
+PG G ++ Q+ + SS ++ +T + + I G+ G+ H
Sbjct: 622 EPGESSGEEDFQKSLLEQDNQSSSSSDSDSDSDDFTSSKQKKKRNIKIRGDLGYEHINRN 681
Query: 356 KYYMKSE-RSELRKYKNAPYR 415
K++ + E E RK Y+
Sbjct: 682 KFFERPESEKEARKRIEKVYK 702
>AY390551-1|AAQ94963.1| 926|Caenorhabditis elegans SMA-9 class IIc
protein.
Length = 926
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -1
Query: 404 HSCIFL-ALTSLISCNTLKLRRGTIHSFHR 318
H C+F A+TSLIS N T+H F +
Sbjct: 894 HICVFFKAITSLISANLKSHLINTLHLFSK 923
>AL132860-26|CAB60511.2| 700|Caenorhabditis elegans Hypothetical
protein Y56A3A.32 protein.
Length = 700
Score = 26.2 bits (55), Expect = 9.5
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 2 YVIIGGGTAGSVLAARLSEEKPKAMVLVIEAGKPEM 109
YVIIG GTA + + ++ +A VL+I +PE+
Sbjct: 242 YVIIGSGTAAYYASLSIRAKQAEAKVLMI-GEEPEL 276
>AF245435-1|AAF87497.1| 2248|Caenorhabditis elegans zinc finger
protein LIN-13 protein.
Length = 2248
Score = 26.2 bits (55), Expect = 9.5
Identities = 34/141 (24%), Positives = 55/141 (39%), Gaps = 6/141 (4%)
Frame = +2
Query: 11 IGGGTAGSVLAARLSEEKPKAMVLVIEAGKPEMLL--SDVPALAHNLQLTDYAWPYTMEH 184
IGG T+G V A SE K V E + LL N +TD + +
Sbjct: 563 IGGLTSGEVQALEASENKKSEFVEPDEYTIRKKLLRWKHAKTKKENRNITD-SNEKEFSY 621
Query: 185 QPGVCLGSDE-QRCYWPRGKALGGSSVTNFML--YTRGRPQDWNKIAADGNYGWSHDEVL 355
+PG G ++ Q+ + SS ++ +T + + I G+ G+ H
Sbjct: 622 EPGESSGEEDFQKSLLEQDNQSSSSSDSDSDSDDFTSSKQKKKRNIKIRGDLGYEHINRN 681
Query: 356 KYYMKSE-RSELRKYKNAPYR 415
K++ + E E RK Y+
Sbjct: 682 KFFERPESEKEARKRIEKVYK 702
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,578,674
Number of Sequences: 27780
Number of extensions: 227325
Number of successful extensions: 538
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 537
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 683806592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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