Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_B17
(422 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomy... 167 5e-43
SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha 3|Sch... 111 4e-26
SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyc... 111 6e-26
SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomy... 94 7e-21
SPCC1795.04c |||20S proteasome component alpha 7|Schizosaccharom... 86 2e-18
SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyc... 83 2e-17
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 83 2e-17
SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein homolog|Schi... 33 0.014
SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c... 31 0.056
SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger protein|Schiz... 28 0.69
SPAC144.03 |ade2|min10, min3|adenylosuccinate synthetase Ade2|Sc... 27 0.91
SPAPB1A11.01 ||SPAPB24D3.11|membrane transporter|Schizosaccharom... 26 2.8
SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 2.8
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca... 26 2.8
SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces pombe... 25 3.7
SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFII... 25 6.4
SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor, ... 24 8.5
SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyce... 24 8.5
SPCC1259.11c |gyp2||GTPase activating protein Gyp2 |Schizosaccha... 24 8.5
SPAC589.08c |dam1||DASH complex subunit Dam1|Schizosaccharomyces... 24 8.5
>SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 245
Score = 167 bits (407), Expect = 5e-43
Identities = 89/135 (65%), Positives = 108/135 (80%), Gaps = 1/135 (0%)
Frame = +2
Query: 17 SERYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSV 196
+++Y+FSLTTFSP+GKLVQIEYAL AV AG TSVGIKA++GVV+ATE K S L S+
Sbjct: 2 TDKYAFSLTTFSPNGKLVQIEYALNAVNAGVTSVGIKATDGVVLATEKKPTSELAIGASL 61
Query: 197 NKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQ-QYYLMYHEPIPTAQLVQRVANVMQEY 373
KV IT IGMVYSGMGPD+R+LV ++RK+AQ Y +Y+E PT LVQ +A+VMQE
Sbjct: 62 EKVCAITPDIGMVYSGMGPDFRVLVDKSRKVAQTTYKKIYNEYPPTKILVQEIASVMQES 121
Query: 374 TQSGGVRPFGVSLLI 418
TQSGGVRPFGVSLL+
Sbjct: 122 TQSGGVRPFGVSLLV 136
>SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 111 bits (267), Expect = 4e-26
Identities = 57/134 (42%), Positives = 82/134 (61%), Gaps = 1/134 (0%)
Frame = +2
Query: 17 SERYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKS-ILYDEHS 193
S Y T FSP G+L Q+EYAL A+ G ++GI A +G+V+A E K S +L E S
Sbjct: 2 SRSYDSRTTIFSPEGRLYQVEYALEAINHAGVALGIVAKDGIVLAAEKKVTSKLLEQEES 61
Query: 194 VNKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVANVMQEY 373
K+ I ++ +G+ D +L+ AR++ QQY ++E +P QLV+RV ++ Q Y
Sbjct: 62 AEKLYHIGDNMLCAVAGLTADANILINYARRVGQQYLQTFNEEMPCEQLVRRVCDLKQGY 121
Query: 374 TQSGGVRPFGVSLL 415
TQ GG+RPFGVS L
Sbjct: 122 TQYGGLRPFGVSFL 135
>SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 259
Score = 111 bits (266), Expect = 6e-26
Identities = 52/131 (39%), Positives = 81/131 (61%)
Frame = +2
Query: 26 YSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKV 205
Y +L+ FSP G+L+Q+EY AV G T++ ++ + +VI E K+ L + + K+
Sbjct: 4 YDRALSVFSPDGRLLQVEYGQEAVRRGTTAIALRGNECIVIGVERKNVPKLQNVSNFQKI 63
Query: 206 EMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVANVMQEYTQSG 385
M+ H+ + ++G+ D R+L+ +AR AQ + L +P+ L + VA V Q+YTQSG
Sbjct: 64 AMVDNHVCLAFAGLNADARILIDKARVEAQNHKLNLADPVSIEYLTRYVAGVQQKYTQSG 123
Query: 386 GVRPFGVSLLI 418
GVRPFGVS LI
Sbjct: 124 GVRPFGVSTLI 134
>SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 247
Score = 94.3 bits (224), Expect = 7e-21
Identities = 49/144 (34%), Positives = 73/144 (50%), Gaps = 6/144 (4%)
Frame = +2
Query: 5 VIMASERYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYD 184
+ M Y + TFSP G+L Q+EYA+ A+ G T++G+K + VV+ E + S L +
Sbjct: 1 MFMTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKDAVVLGVEKRLTSPLME 60
Query: 185 EHSVNKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVANVM 364
HSV K+ I HIG SG+ D R ++ AR Q + Y EP Q + ++
Sbjct: 61 SHSVEKLFEIDSHIGCAISGLTADARTIIEHARVQTQNHRFTYDEPQGIESTTQSICDLA 120
Query: 365 QEYTQSGG------VRPFGVSLLI 418
+ + RPFGV+LLI
Sbjct: 121 LRFGEGEDGEERIMSRPFGVALLI 144
>SPCC1795.04c |||20S proteasome component alpha
7|Schizosaccharomyces pombe|chr 3|||Manual
Length = 253
Score = 85.8 bits (203), Expect = 2e-18
Identities = 46/120 (38%), Positives = 64/120 (53%)
Frame = +2
Query: 47 FSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKVEMITGHI 226
FSP G+L Q EYA AV T +GIK +GV++A E S L N++ + HI
Sbjct: 14 FSPDGRLFQAEYAYKAVENASTCIGIKCEDGVILALEKVVTSKLLKPRVNNRIGSVDRHI 73
Query: 227 GMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVANVMQEYTQSGGVRPFGV 406
G+ +G PD + +V +AR A + Y PIP + R+ N +Q +T VRPFGV
Sbjct: 74 GIATTGFIPDGQHIVKRARDEATSWRDNYGSPIPGTVIADRLGNYVQLFTCYSSVRPFGV 133
>SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 244
Score = 83.0 bits (196), Expect = 2e-17
Identities = 48/129 (37%), Positives = 70/129 (54%), Gaps = 1/129 (0%)
Frame = +2
Query: 35 SLTTFSPSGKLVQIEYALAAVA-AGGTSVGIKASNGVVIATENKHKSILYDEHSVNKVEM 211
++T FSP G+L Q+EYA A AG TSVG+ N + ++ K L D +V V
Sbjct: 10 TITVFSPEGRLYQVEYAFKAFNNAGITSVGVTGKNCACVISQKKVPDKLIDASTVKHVFP 69
Query: 212 ITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVANVMQEYTQSGGV 391
IT IG V +G D R V++AR A ++ P+P L +R+AN+ Q TQ +
Sbjct: 70 ITKGIGCVMTGSIADARAQVSRARSEAAEFEYKNGYPMPCDVLAKRMANIAQVSTQRAAM 129
Query: 392 RPFGVSLLI 418
RP GV++ +
Sbjct: 130 RPLGVAMTL 138
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 82.6 bits (195), Expect = 2e-17
Identities = 45/136 (33%), Positives = 70/136 (51%)
Frame = +2
Query: 11 MASERYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEH 190
M +Y TT+SP G+L Q+EYAL A+ G +VG+ + V+ ++ L
Sbjct: 1 MFRNQYDGDATTWSPQGRLHQVEYALEAIKQGSATVGLVSKTHAVLVALKRNAEELSSYQ 60
Query: 191 SVNKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVANVMQE 370
K+ I HIG+ +G+ PD R+L ++ A ++ PIP +L+ +VA Q
Sbjct: 61 K--KLIRIDDHIGIAIAGLAPDARVLSNYMKQEALSSKTLFTRPIPVRRLMSKVAEKAQI 118
Query: 371 YTQSGGVRPFGVSLLI 418
TQ G RP+GV L+
Sbjct: 119 NTQEYGRRPYGVGFLV 134
>SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 3071
Score = 33.5 bits (73), Expect = 0.014
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = +2
Query: 179 YDEHSVNKVEMITG----HIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQ 346
Y +H+VNK+++IT V D+ L T RK+ YY +Y P +L++
Sbjct: 1589 YSQHTVNKIQIITNITLDFDSFVLRTTVNDFLFLQTILRKIYNFYYALYDVPTTDVELLK 1648
Query: 347 R 349
R
Sbjct: 1649 R 1649
>SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1687
Score = 31.5 bits (68), Expect = 0.056
Identities = 16/40 (40%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Frame = -3
Query: 240 EYTIPIWPVIISTLLTLCSSYKMLLCLFSVAIT--TPLDA 127
++ +P+WP+++S LL + SY C+ +VAI+ T LDA
Sbjct: 1505 KHLLPLWPIVVSELLIIFKSY----CMPNVAISKETLLDA 1540
>SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 547
Score = 27.9 bits (59), Expect = 0.69
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -3
Query: 219 PVIISTLLTLCSSYKMLLCLFSVAITTPLDAFMPTEVPPAA 97
P +++T CSS L L + PL A +P + PP A
Sbjct: 265 PTLLNTYGNRCSSTDTLSSLSRLTSQDPLKASLPLQSPPLA 305
>SPAC144.03 |ade2|min10, min3|adenylosuccinate synthetase
Ade2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 27.5 bits (58), Expect = 0.91
Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Frame = +2
Query: 119 GIKASNGVVIATENKHKSILYDEH----SVNKVEMITGHIGMVYSGMGPDYRLLVTQARK 286
G+K + + I+ + H +++D H ++N+ E+ IG G+GP Y T+A +
Sbjct: 103 GLKCRDRIFIS-DRAH--LVFDYHQRADALNEAELGKQSIGTTGKGIGPAYS---TKATR 156
Query: 287 MAQQYYLMYHEPIPTAQLVQRVANVMQEY 373
+ + +YH A+ + VA++ + Y
Sbjct: 157 SGIRVHHLYHWAEFEARYRKNVADLQKRY 185
>SPAPB1A11.01 ||SPAPB24D3.11|membrane
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 495
Score = 25.8 bits (54), Expect = 2.8
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = -3
Query: 222 WPVIISTLLTLCSSYKMLLCLFSVAITTP 136
WP+ I + T+ S+ +LC++ ++ P
Sbjct: 33 WPIRIRIINTIIISFMTMLCMYGSSVFMP 61
>SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 345
Score = 25.8 bits (54), Expect = 2.8
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +2
Query: 155 ENKHKSILYDEHSVNKVEMITGHIGMVYSGMGPDYRLLVTQARK 286
EN+ + + + N +E +T HI Y G G + T +RK
Sbjct: 21 ENRKEEVSTLQDMANDLEKLTDHIEATYIGRGVPHDHAKTGSRK 64
>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 2410
Score = 25.8 bits (54), Expect = 2.8
Identities = 7/34 (20%), Positives = 19/34 (55%)
Frame = -3
Query: 237 YTIPIWPVIISTLLTLCSSYKMLLCLFSVAITTP 136
+ I +W +++ L + ++ ++C+F V + P
Sbjct: 2241 FYIVLWALLLGVLAWISRTHSWIICVFGVGLGAP 2274
>SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 969
Score = 25.4 bits (53), Expect = 3.7
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = -2
Query: 409 RNAERTNAS*LSIFLHDVRHSLDQLRCGYRLVVHQVVLLG--HFPGLCDEQTIIRAHAGV 236
R+ E NAS +I +H S + G ++ +G +P + + + +H G+
Sbjct: 39 RDPETDNAS-AAIDVHIGSQSNPRELLGLAHFCEHLLFMGTKKYPDENEYRKYLESHNGI 97
Query: 235 HHSYMASNHFNF 200
++Y ASN+ N+
Sbjct: 98 SNAYTASNNTNY 109
>SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFIID
complex subunit Taf111|Schizosaccharomyces pombe|chr
1|||Manual
Length = 979
Score = 24.6 bits (51), Expect = 6.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 143 VIATENKHKSILYDEHSVNK 202
V T + K+I+YDE VNK
Sbjct: 271 VFTTNDWEKNIIYDESDVNK 290
>SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor,
zf-fungal binuclear cluster type |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 977
Score = 24.2 bits (50), Expect = 8.5
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -3
Query: 204 TLLTLCSSYKMLLCLFSVAITTPLDAFMPTEVPPAATAAKAYS 76
+L++ S ++L S +P ++ ++ PP +TAA AYS
Sbjct: 204 SLMSASLSKNLVLDPASPKSVSPDLVYVSSDNPPVSTAASAYS 246
>SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 642
Score = 24.2 bits (50), Expect = 8.5
Identities = 8/22 (36%), Positives = 10/22 (45%)
Frame = -1
Query: 194 HCVHHIRCSCVYSLLQSQHHWT 129
H +H I CS L HW+
Sbjct: 541 HLIHQIHCSRALKTLVQNGHWS 562
>SPCC1259.11c |gyp2||GTPase activating protein Gyp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 720
Score = 24.2 bits (50), Expect = 8.5
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1
Query: 82 CFSGCSSRRHFR 117
CFSGC RR F+
Sbjct: 672 CFSGCQDRRSFQ 683
>SPAC589.08c |dam1||DASH complex subunit Dam1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 155
Score = 24.2 bits (50), Expect = 8.5
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 220 PYRNGVLRHGP*LSSARHTSQENGPTVLPDVPRADTHSA 336
PY GV+ H P ++A T N + + R +T+SA
Sbjct: 118 PYDGGVISHDPNFATADETFATNDTSF---IERPETYSA 153
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,766,922
Number of Sequences: 5004
Number of extensions: 35363
Number of successful extensions: 100
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 95
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 150383836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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