Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_B17
(422 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0057 + 25472872-25472912,25473012-25473157,25474008-254740... 173 6e-44
03_03_0187 + 15253000-15253207,15253281-15253370,15254338-152544... 137 2e-40
06_01_0539 + 3869156-3869908 117 3e-27
06_01_0529 + 3831100-3831852 117 3e-27
08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323 114 2e-26
09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341 113 4e-26
11_06_0394 - 23084485-23084577,23084677-23084802,23085134-230852... 98 3e-21
05_05_0306 - 23977543-23977614,23977709-23977799,23978296-239783... 94 5e-20
03_01_0568 - 4192514-4192606,4192694-4192753,4192837-4192932,419... 91 4e-19
06_01_0479 + 3419657-3420337 90 6e-19
01_06_1091 + 34464923-34465026,34465124-34465163,34465245-344653... 87 7e-18
07_03_1256 - 25237465-25237590,25237833-25237918,25238025-252380... 62 2e-10
02_01_0268 + 1784781-1785056,1787314-1787394,1787395-1787856 46 2e-05
06_01_0285 - 2090427-2090558,2091045-2091119,2091334-2091407,209... 33 0.072
02_05_0884 - 32483735-32483866,32484417-32484491,32484707-324847... 33 0.072
06_02_0264 + 13581244-13581333,13581526-13581806,13582022-13582253 29 2.0
08_02_0775 + 21070898-21071290,21071406-21071504,21075103-210751... 28 3.6
12_02_0899 - 24142210-24142293,24142589-24142634,24142773-241428... 27 6.2
08_02_0160 - 13423033-13423050,13426060-13426721,13428417-13428663 27 6.2
01_07_0036 + 40647046-40647100,40647120-40647571,40648135-406482... 27 6.2
06_01_0601 + 4337575-4340149,4340566-4340978 27 8.2
04_04_0198 + 23502657-23502900,23505228-23505298,23505690-235057... 27 8.2
02_04_0021 + 18975992-18976408 27 8.2
01_07_0135 + 41342118-41342181,41342326-41343260 27 8.2
>02_05_0057 +
25472872-25472912,25473012-25473157,25474008-25474072,
25474182-25474228,25474922-25474997,25475176-25475243,
25475862-25475931,25476178-25476263,25476418-25476480,
25476556-25476621,25476740-25476788
Length = 258
Score = 173 bits (420), Expect = 6e-44
Identities = 95/159 (59%), Positives = 112/159 (70%), Gaps = 23/159 (14%)
Frame = +2
Query: 11 MASERYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIK--------------------- 127
M +YSFSLTTFSPSGKLVQIE+AL AV +G TS+GIK
Sbjct: 1 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKGASREAIPSLYFYCVMRIEKG 60
Query: 128 --ASNGVVIATENKHKSILYDEHSVNKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQY 301
A+NGVVIATE K SIL DE SV K++ +T +IG+VYSGMGPD+R+LV ++RK AQQY
Sbjct: 61 RGAANGVVIATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQY 120
Query: 302 YLMYHEPIPTAQLVQRVANVMQEYTQSGGVRPFGVSLLI 418
Y +Y E IP QLV+ A VMQE+TQSGGVRPFGVSLLI
Sbjct: 121 YRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLI 159
>03_03_0187 +
15253000-15253207,15253281-15253370,15254338-15254402,
15254489-15254535,15255195-15255270,15255432-15255499,
15255793-15255862,15256024-15256109,15256328-15256390,
15256472-15256537,15256938-15256986
Length = 295
Score = 137 bits (332), Expect(3) = 2e-40
Identities = 66/97 (68%), Positives = 79/97 (81%)
Frame = +2
Query: 128 ASNGVVIATENKHKSILYDEHSVNKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYL 307
A+NGVVIATE K SIL DE SV K++ +T +IG+VYSGMGPD+R+LV ++RK AQQYY
Sbjct: 100 AANGVVIATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYR 159
Query: 308 MYHEPIPTAQLVQRVANVMQEYTQSGGVRPFGVSLLI 418
+Y E IP QLV+ A VMQE+TQSGGVRPFGVSLLI
Sbjct: 160 LYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLI 196
Score = 42.7 bits (96), Expect(3) = 2e-40
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = +2
Query: 50 SPSGKLVQIEYALAAVAAGGTSVGIK 127
SPSGKLVQIE+AL AV +G TS+GIK
Sbjct: 44 SPSGKLVQIEHALTAVGSGQTSLGIK 69
Score = 23.0 bits (47), Expect(3) = 2e-40
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2
Query: 11 MASERYSFSLTTF 49
M +YSFSLTTF
Sbjct: 1 MGDSQYSFSLTTF 13
>06_01_0539 + 3869156-3869908
Length = 250
Score = 117 bits (282), Expect = 3e-27
Identities = 59/134 (44%), Positives = 81/134 (60%), Gaps = 1/134 (0%)
Frame = +2
Query: 17 SERYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKS-ILYDEHS 193
S RY T FSP G+L Q+EYA+ A+ G+++G+ A++GVV+ E K S +L S
Sbjct: 2 SRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRS 61
Query: 194 VNKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVANVMQEY 373
K+ I H+ +G+ D +L+ AR AQ+Y L Y EPIP QLVQ + + Q Y
Sbjct: 62 AEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGY 121
Query: 374 TQSGGVRPFGVSLL 415
TQ GG+RPFGVS L
Sbjct: 122 TQFGGLRPFGVSFL 135
>06_01_0529 + 3831100-3831852
Length = 250
Score = 117 bits (282), Expect = 3e-27
Identities = 59/134 (44%), Positives = 81/134 (60%), Gaps = 1/134 (0%)
Frame = +2
Query: 17 SERYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKS-ILYDEHS 193
S RY T FSP G+L Q+EYA+ A+ G+++G+ A++GVV+ E K S +L S
Sbjct: 2 SRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRS 61
Query: 194 VNKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVANVMQEY 373
K+ I H+ +G+ D +L+ AR AQ+Y L Y EPIP QLVQ + + Q Y
Sbjct: 62 AEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGY 121
Query: 374 TQSGGVRPFGVSLL 415
TQ GG+RPFGVS L
Sbjct: 122 TQFGGLRPFGVSFL 135
>08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323
Length = 319
Score = 114 bits (275), Expect = 2e-26
Identities = 53/132 (40%), Positives = 80/132 (60%)
Frame = +2
Query: 23 RYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNK 202
RY ++T FSP G L Q+EYAL AV G +VG++ ++ VV+ E K L D S+ K
Sbjct: 73 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSMRK 132
Query: 203 VEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVANVMQEYTQS 382
+ + HI + +G+ D R+L+ +AR Q + L +P+ + + +A + Q+YTQS
Sbjct: 133 IASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQS 192
Query: 383 GGVRPFGVSLLI 418
GGVRPFG+S LI
Sbjct: 193 GGVRPFGLSTLI 204
>09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341
Length = 249
Score = 113 bits (273), Expect = 4e-26
Identities = 54/132 (40%), Positives = 79/132 (59%)
Frame = +2
Query: 23 RYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNK 202
RY ++T FSP G L Q+EYAL AV G +VG++ S+ VV+ E K L D SV K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGSDTVVLGVEKKSTPKLQDSRSVRK 62
Query: 203 VEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVANVMQEYTQS 382
+ + HI + +G+ D R+L+ +AR Q + L + + + + +A + Q+YTQS
Sbjct: 63 IASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDAVTVEYITRYIAGLQQKYTQS 122
Query: 383 GGVRPFGVSLLI 418
GGVRPFG+S LI
Sbjct: 123 GGVRPFGLSTLI 134
>11_06_0394 -
23084485-23084577,23084677-23084802,23085134-23085236,
23085895-23085953,23086418-23086519,23086601-23086714,
23087666-23087746,23088073-23088154,23088504-23088556
Length = 270
Score = 97.9 bits (233), Expect = 3e-21
Identities = 53/134 (39%), Positives = 73/134 (54%), Gaps = 3/134 (2%)
Frame = +2
Query: 26 YSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKV 205
Y + TFSP G+L Q+EYA+ A+ G T++G+K +GVV+A E + S L + SV K+
Sbjct: 21 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSPLLEPSSVEKI 80
Query: 206 EMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVANV---MQEYT 376
I HIG SG+ D R LV AR Q + Y EP+ Q + ++ E
Sbjct: 81 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQAICDLALRFGEGD 140
Query: 377 QSGGVRPFGVSLLI 418
+ RPFGVSLLI
Sbjct: 141 EESMSRPFGVSLLI 154
>05_05_0306 -
23977543-23977614,23977709-23977799,23978296-23978361,
23978399-23978479,23979130-23979176,23979408-23979492,
23979570-23979656,23979728-23979801,23980083-23980166,
23980259-23980298,23980386-23980489
Length = 276
Score = 93.9 bits (223), Expect = 5e-20
Identities = 47/131 (35%), Positives = 75/131 (57%)
Frame = +2
Query: 26 YSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKV 205
Y S+TTFSP G++ Q+EYA AV GT VGIK +G+V+ E S + + S ++
Sbjct: 8 YDLSVTTFSPDGRVFQVEYAGKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMILKGSNRRL 67
Query: 206 EMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVANVMQEYTQSG 385
+ H G+ +G+ D R +V++A+ A Y +Y EP+P +L RVA+ + T
Sbjct: 68 HSVHRHSGLAVAGLAADGRQIVSRAKSEAASYEKVYGEPMPVKELADRVASYVHLCTLYW 127
Query: 386 GVRPFGVSLLI 418
+RPFG +++
Sbjct: 128 WLRPFGCGVIL 138
>03_01_0568 -
4192514-4192606,4192694-4192753,4192837-4192932,
4193088-4193170,4193289-4193347,4193463-4193559,
4194151-4194232,4194353-4194447,4194585-4194660
Length = 246
Score = 90.6 bits (215), Expect = 4e-19
Identities = 49/132 (37%), Positives = 75/132 (56%), Gaps = 1/132 (0%)
Frame = +2
Query: 26 YSFSLTTFSPSGKLVQIEYALAAV-AAGGTSVGIKASNGVVIATENKHKSILYDEHSVNK 202
Y +T FSP G+L Q+EYA AV +AG TS+G++ + V + T+ K L D SV
Sbjct: 9 YDRHITIFSPEGRLYQVEYAFKAVKSAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTH 68
Query: 203 VEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVANVMQEYTQS 382
+ IT +IG++ +G+ D R LV QAR A ++ + +P L + +A+ Q YTQ
Sbjct: 69 LFPITKYIGLLATGLTADARSLVYQARNEAAEFRFKWGYEMPVDVLAKWIADKAQVYTQH 128
Query: 383 GGVRPFGVSLLI 418
+RP GV ++
Sbjct: 129 AYMRPLGVVAMV 140
>06_01_0479 + 3419657-3420337
Length = 226
Score = 90.2 bits (214), Expect = 6e-19
Identities = 46/111 (41%), Positives = 66/111 (59%), Gaps = 1/111 (0%)
Frame = +2
Query: 86 LAAVAAGGTSVGIKASNGVVIATENKHKS-ILYDEHSVNKVEMITGHIGMVYSGMGPDYR 262
+ A+ G+++G+ A++GVV+ E K S +L S K+ I H+ +G+ D
Sbjct: 1 MEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDAN 60
Query: 263 LLVTQARKMAQQYYLMYHEPIPTAQLVQRVANVMQEYTQSGGVRPFGVSLL 415
+L+ AR AQ+Y L Y EPIP QLVQ + + Q YTQ GG+RPFGVS L
Sbjct: 61 ILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFL 111
>01_06_1091 +
34464923-34465026,34465124-34465163,34465245-34465328,
34465457-34465480,34465582-34465655,34465726-34465812,
34465922-34466006,34466215-34466261,34467048-34467113,
34468307-34468397,34468477-34468548
Length = 257
Score = 86.6 bits (205), Expect = 7e-18
Identities = 49/139 (35%), Positives = 74/139 (53%), Gaps = 8/139 (5%)
Frame = +2
Query: 26 YSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKV 205
Y S+TTFSP G++ Q+EYA AV GT VGIK +G+V+ E S + E S ++
Sbjct: 8 YDLSVTTFSPDGRVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMMLEGSNRRI 67
Query: 206 EMITGHIG--------MVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVANV 361
+ H G M +G+ D R +V++A+ A Y +Y EPI +L RVA+
Sbjct: 68 HSVHWHSGLDIILINVMAVAGLAADGRQIVSRAKSEAASYEKVYGEPISVKELADRVASY 127
Query: 362 MQEYTQSGGVRPFGVSLLI 418
+ T +RPFG +++
Sbjct: 128 VHLCTLYWWLRPFGCGVIL 146
>07_03_1256 -
25237465-25237590,25237833-25237918,25238025-25238083,
25238516-25238612,25239582-25239663,25239752-25240096
Length = 264
Score = 62.1 bits (144), Expect = 2e-10
Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 1/115 (0%)
Frame = +2
Query: 77 EYALAAVA-AGGTSVGIKASNGVVIATENKHKSILYDEHSVNKVEMITGHIGMVYSGMGP 253
+YA AV AG TSVG++ + V + T K L+D ++ + IT IG++ +GM
Sbjct: 85 DYAFNAVKLAGITSVGVRGDDSVYVLTHRKEDK-LHDPTTITNLFAITDRIGLLATGMPG 143
Query: 254 DYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVANVMQEYTQSGGVRPFGVSLLI 418
D R + +AR A ++ + + L Q +A+ Q TQ +RP+GV +I
Sbjct: 144 DGRAIAQEARNAAAEFRFKWGYKMSPCMLAQWIADRAQIRTQHAQIRPYGVVSMI 198
>02_01_0268 + 1784781-1785056,1787314-1787394,1787395-1787856
Length = 272
Score = 45.6 bits (103), Expect = 2e-05
Identities = 28/94 (29%), Positives = 45/94 (47%)
Frame = +2
Query: 86 LAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKVEMITGHIGMVYSGMGPDYRL 265
+ AV G VG+++ V+A NK S L H KV + H G+ +G+ D R+
Sbjct: 1 MEAVKQGSACVGLRSRTHAVLAAANKAASEL-SSHQ-RKVFRVADHAGVALAGLTADGRV 58
Query: 266 LVTQARKMAQQYYLMYHEPIPTAQLVQRVANVMQ 367
L R + +Y P+P ++L R+A+ Q
Sbjct: 59 LSRFLRSECINHAFVYDAPLPVSRLALRLADKAQ 92
>06_01_0285 -
2090427-2090558,2091045-2091119,2091334-2091407,
2091792-2091903,2092036-2092108,2092291-2092346,
2092679-2092755,2093384-2093525
Length = 246
Score = 33.5 bits (73), Expect = 0.072
Identities = 22/98 (22%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Frame = +2
Query: 104 GGTSVGIKASNGVVIATENKHKSILY-DEHSVNKVEMITGHIGMVYSGMGPDYRLLVTQA 280
G T VG+ GVV+A +++ + +Y + +K+ +T ++ + SG D +++
Sbjct: 25 GTTIVGVCYDGGVVLAADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADTQVISEYV 84
Query: 281 RKMAQQYYLMYHEPIP---TAQLVQRVANVMQEYTQSG 385
R Q+ + +P A L++ +A + Q+G
Sbjct: 85 RYFLHQHTIQLGQPATVKVAANLIRLLAYQNKNMLQAG 122
>02_05_0884 -
32483735-32483866,32484417-32484491,32484707-32484780,
32485180-32485291,32485476-32485548,32485674-32485729,
32486046-32486122,32486799-32486940
Length = 246
Score = 33.5 bits (73), Expect = 0.072
Identities = 22/98 (22%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Frame = +2
Query: 104 GGTSVGIKASNGVVIATENKHKSILY-DEHSVNKVEMITGHIGMVYSGMGPDYRLLVTQA 280
G T VG+ GVV+A +++ + +Y + +K+ +T ++ + SG D +++
Sbjct: 25 GTTIVGVCYDGGVVLAADSRTSTGMYVANRASDKITQLTDNVYICRSGSAADTQVISDYV 84
Query: 281 RKMAQQYYLMYHEPIP---TAQLVQRVANVMQEYTQSG 385
R Q+ + +P A L++ +A + Q+G
Sbjct: 85 RYFLHQHTIQLGQPATVKVAANLIRLLAYQNKNMLQAG 122
>06_02_0264 + 13581244-13581333,13581526-13581806,13582022-13582253
Length = 200
Score = 28.7 bits (61), Expect = 2.0
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3
Query: 324 YPQRSWSSEWRTSCKNILNQEAFV 395
+P++ S EWR CK+ +NQ +
Sbjct: 114 FPRKWQSGEWRKKCKDFMNQRTSI 137
>08_02_0775 +
21070898-21071290,21071406-21071504,21075103-21075126,
21076344-21076391,21076536-21076788,21076945-21077055,
21077544-21077680,21077778-21077891,21077982-21078181,
21078268-21078516,21078730-21078886
Length = 594
Score = 27.9 bits (59), Expect = 3.6
Identities = 10/23 (43%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
Frame = -3
Query: 246 MPEYTIPIWPVI-ISTLLTLCSS 181
+PE IP+W V+ + T++TLC +
Sbjct: 433 LPEIEIPLWGVVYVPTVITLCKA 455
>12_02_0899 -
24142210-24142293,24142589-24142634,24142773-24142886,
24143445-24143566,24144361-24144480,24144581-24144664,
24144813-24144914,24145589-24145604,24147929-24148329
Length = 362
Score = 27.1 bits (57), Expect = 6.2
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -3
Query: 180 YKMLLCLFSVAITTPLDAFMPTEVPPAATA-AKAYSI*TNLP 58
+ +LL + S T PLD PT AA A A + + T LP
Sbjct: 8 HHLLLSILSALPTCPLDHSTPTSAAAAAAATASHHHVVTTLP 49
>08_02_0160 - 13423033-13423050,13426060-13426721,13428417-13428663
Length = 308
Score = 27.1 bits (57), Expect = 6.2
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +2
Query: 227 GMVY--SGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLV 343
G VY GM P+YR L+T + + Q L PTAQ++
Sbjct: 249 GPVYLPGGMFPNYRPLITDNQPVVQSISLNAPSAQPTAQVL 289
>01_07_0036 +
40647046-40647100,40647120-40647571,40648135-40648257,
40648407-40648461,40648613-40648722,40649352-40649531,
40650003-40650101,40651182-40651280,40652195-40652289,
40652290-40652378,40652739-40652901,40653299-40653404,
40655647-40655829,40656059-40656286,40656373-40656486
Length = 716
Score = 27.1 bits (57), Expect = 6.2
Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = -3
Query: 237 YTIPIWPVIISTLLTLCSSYKMLLC--LFSVAITTPLDAFMPTEVPPAATAAKAYSI*TN 64
Y++P +IS +T L+C + P+ A + PP YS
Sbjct: 402 YSVPFLVTLISCCMTCALLLSRLVCDDISGGQENLPIPATNLVDDPPVPPTGFVYSKSLK 461
Query: 63 LPEGLKV 43
+P+G+K+
Sbjct: 462 IPKGIKI 468
>06_01_0601 + 4337575-4340149,4340566-4340978
Length = 995
Score = 26.6 bits (56), Expect = 8.2
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 254 DYRLLVTQARKMAQ-QYYLMYHEPIPTAQLVQRVANVMQEYTQSGGVRPFGVSLLI 418
D LL++ A +A YL +H P + +NV+ + + V FGVS L+
Sbjct: 761 DLELLLSIAGNVADGMAYLHHHAPFGVVHCDLKPSNVLLDDDMTAIVSDFGVSKLV 816
>04_04_0198 +
23502657-23502900,23505228-23505298,23505690-23505727,
23505905-23507693
Length = 713
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 23 RYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVV 145
R++F L P+G +V ++ + A A GG ++G G+V
Sbjct: 508 RHNF-LAHQRPAGVVVAVDATVVAAAGGGIAIGPLGEEGLV 547
>02_04_0021 + 18975992-18976408
Length = 138
Score = 26.6 bits (56), Expect = 8.2
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -3
Query: 207 STLLTLCSSYKMLLCLFSVAITTPLDAFMPTEVPPAAT 94
+TL + + ++C+ A+T P PT PPA T
Sbjct: 75 TTLCVVSCNQNSIVCMVRCALTPPPPKPKPTPPPPAPT 112
>01_07_0135 + 41342118-41342181,41342326-41343260
Length = 332
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +2
Query: 83 ALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKVEMI 214
ALAA GG V S GV+ + + D++ + VE +
Sbjct: 137 ALAAAGLGGVGVSTSVSQGVIANSYPPSNGVFNDDYMFDIVEYL 180
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,970,241
Number of Sequences: 37544
Number of extensions: 246046
Number of successful extensions: 730
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 725
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 778540620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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