Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_B17
         (422 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   1.1  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   7.5  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    20   10.0 
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    20   10.0 
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    20   10.0 

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +2

Query: 143 VIATENKHKSILYDEHSVNKVEMITG 220
           + A+    ++IL+ + S  KVEMITG
Sbjct: 805 IYASSIDKENILFLDLSTGKVEMITG 830


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 71  QIEYALAAVAAGGTSVGI 124
           +I+Y +A    GGT  GI
Sbjct: 206 KIDYLVAGAGTGGTISGI 223


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 185 EHSVNKVEMITGHIGMV 235
           +H V+K E+ITG   +V
Sbjct: 123 DHDVDKDELITGWSAVV 139


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +3

Query: 264 CSSHKPGKWPN 296
           C    PGKWP+
Sbjct: 485 CMDCGPGKWPH 495


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +3

Query: 264 CSSHKPGKWPN 296
           C    PGKWP+
Sbjct: 575 CMDCGPGKWPH 585


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,979
Number of Sequences: 438
Number of extensions: 2820
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10873896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)