Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_B17
(422 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g16470.1 68414.m01970 20S proteasome alpha subunit B (PAB1) (... 195 1e-50
At1g79210.1 68414.m09235 20S proteasome alpha subunit B, putativ... 194 2e-50
At3g22110.1 68416.m02791 20S proteasome alpha subunit C (PAC1) (... 117 4e-27
At5g66140.1 68418.m08332 20S proteasome alpha subunit D2 (PAD2) ... 116 9e-27
At3g51260.1 68416.m05611 20S proteasome alpha subunit D (PAD1) 116 9e-27
At3g14290.1 68416.m01808 20S proteasome alpha subunit E2 (PAE2) ... 98 2e-21
At1g53850.1 68414.m06129 20S proteasome alpha subunit E1 (PAE1) ... 98 2e-21
At2g05840.1 68415.m00632 20S proteasome alpha subunit A2 (PAA2) ... 95 1e-20
At5g35590.1 68418.m04237 20S proteasome alpha subunit A1 (PAA1) ... 95 2e-20
At2g27020.1 68415.m03244 20S proteasome alpha subunit G (PAG1) (... 93 5e-20
At5g42790.1 68418.m05212 20S proteasome alpha subunit F1 (PAF1) ... 91 2e-19
At1g47250.1 68414.m05231 20S proteasome alpha subunit F2 (PAF2) ... 91 2e-19
At4g31300.1 68417.m04441 20S proteasome beta subunit A (PBA1) (P... 34 0.046
At2g27680.1 68415.m03354 aldo/keto reductase family protein cont... 31 0.32
At5g28490.1 68418.m03466 expressed protein contains Pfam profile... 29 0.98
At5g26200.1 68418.m03118 mitochondrial substrate carrier family ... 29 0.98
At4g35560.1 68417.m05053 expressed protein 28 2.3
At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1) id... 28 3.0
At4g24350.1 68417.m03494 phosphorylase family protein contains P... 27 5.2
At5g47580.1 68418.m05873 expressed protein strong similarity to ... 27 6.9
At4g14720.1 68417.m02264 expressed protein 27 6.9
At4g12420.1 68417.m01964 multi-copper oxidase, putative (SKU5) i... 27 6.9
At5g18850.1 68418.m02240 expressed protein 26 9.1
At1g48930.1 68414.m05481 endo-1,4-beta-glucanase, putative / cel... 26 9.1
At1g34130.1 68414.m04234 oligosaccharyl transferase STT3 subunit... 26 9.1
>At1g16470.1 68414.m01970 20S proteasome alpha subunit B (PAB1)
(PRC3) identical to proteasome subunit alpha type 2
SP:O23708, GI:6093778; identical to cDNA proteasome
subunit prc3 GI:2511573
Length = 235
Score = 195 bits (475), Expect = 1e-50
Identities = 94/136 (69%), Positives = 112/136 (82%)
Frame = +2
Query: 11 MASERYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEH 190
M +YSFSLTTFSPSGKLVQIE+AL AV +G TS+GIKASNGVVIATE K SIL DE
Sbjct: 1 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEA 60
Query: 191 SVNKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVANVMQE 370
SV K++ +T +IG+VYSGMGPD+R+LV ++RK A+QY +Y EPIP QLV+ A VMQE
Sbjct: 61 SVQKIQHLTPNIGVVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQE 120
Query: 371 YTQSGGVRPFGVSLLI 418
+TQSGGVRPFGVSLL+
Sbjct: 121 FTQSGGVRPFGVSLLV 136
>At1g79210.1 68414.m09235 20S proteasome alpha subunit B, putative
nearly identical to SP|O23708 Proteasome subunit alpha
type 2 (EC 3.4.25.1) (20S proteasome alpha subunit B)
{Arabidopsis thaliana} and to At1g16470
Length = 235
Score = 194 bits (473), Expect = 2e-50
Identities = 94/136 (69%), Positives = 111/136 (81%)
Frame = +2
Query: 11 MASERYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEH 190
M +YSFSLTTFSPSGKLVQIE+AL AV +G TS+GIKASNGVVIATE K SIL DE
Sbjct: 1 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEA 60
Query: 191 SVNKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVANVMQE 370
SV K++ +T +IG VYSGMGPD+R+LV ++RK A+QY +Y EPIP QLV+ A VMQE
Sbjct: 61 SVQKIQHLTPNIGTVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQE 120
Query: 371 YTQSGGVRPFGVSLLI 418
+TQSGGVRPFGVSLL+
Sbjct: 121 FTQSGGVRPFGVSLLV 136
>At3g22110.1 68416.m02791 20S proteasome alpha subunit C (PAC1)
(PRC9) identical to GB:AAC32057 from [Arabidopsis
thaliana] (Genetics (1998) 149 (2), 677-692); identical
to cDNA proteasome subunit prc9 GI:2511583
Length = 250
Score = 117 bits (281), Expect = 4e-27
Identities = 58/134 (43%), Positives = 80/134 (59%), Gaps = 1/134 (0%)
Frame = +2
Query: 17 SERYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKS-ILYDEHS 193
S RY T FSP G+L Q+EYA+ A+ G+++GI + +GVV+ E K S +L S
Sbjct: 2 SRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLIGEKKVTSKLLQTSTS 61
Query: 194 VNKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVANVMQEY 373
K+ I H+ +G+ D +L+ AR AQ+Y MY EP+P QLVQ + + Q Y
Sbjct: 62 AEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFMYQEPMPVEQLVQSLCDTKQGY 121
Query: 374 TQSGGVRPFGVSLL 415
TQ GG+RPFGVS L
Sbjct: 122 TQFGGLRPFGVSFL 135
>At5g66140.1 68418.m08332 20S proteasome alpha subunit D2 (PAD2)
(PRS1) (PRC6) identical to SP|O24616 Proteasome subunit
alpha type 7-2 (EC 3.4.25.1) (20S proteasome alpha
subunit D2) {Arabidopsis thaliana}
Length = 250
Score = 116 bits (278), Expect = 9e-27
Identities = 54/132 (40%), Positives = 80/132 (60%)
Frame = +2
Query: 23 RYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNK 202
RY ++T FSP G L Q+EYAL AV G +VG++ ++ VV+A E K L D S K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLAVEKKSTPKLQDSRSARK 62
Query: 203 VEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVANVMQEYTQS 382
+ + HI + +G+ D R+L+ +AR Q + L +P+ + + +A + Q+YTQS
Sbjct: 63 IVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQS 122
Query: 383 GGVRPFGVSLLI 418
GGVRPFG+S LI
Sbjct: 123 GGVRPFGLSTLI 134
>At3g51260.1 68416.m05611 20S proteasome alpha subunit D (PAD1)
Length = 250
Score = 116 bits (278), Expect = 9e-27
Identities = 54/132 (40%), Positives = 80/132 (60%)
Frame = +2
Query: 23 RYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNK 202
RY ++T FSP G L Q+EYAL AV G +VG++ ++ VV+A E K L D S K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLAVEKKSTPKLQDSRSARK 62
Query: 203 VEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVANVMQEYTQS 382
+ + HI + +G+ D R+L+ +AR Q + L +P+ + + +A + Q+YTQS
Sbjct: 63 IVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQS 122
Query: 383 GGVRPFGVSLLI 418
GGVRPFG+S LI
Sbjct: 123 GGVRPFGLSTLI 134
>At3g14290.1 68416.m01808 20S proteasome alpha subunit E2 (PAE2)
identical to 20S proteasome subunit PAE2 GB:AAC32061
from [Arabidopsis thaliana]
Length = 237
Score = 97.9 bits (233), Expect = 2e-21
Identities = 53/141 (37%), Positives = 74/141 (52%), Gaps = 3/141 (2%)
Frame = +2
Query: 5 VIMASERYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYD 184
+ + Y + TFSP G+L Q+EYA+ A+ G T++G+K GVV+A E + S L +
Sbjct: 1 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLE 60
Query: 185 EHSVNKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVANV- 361
SV K+ I HIG SG+ D R LV AR Q + Y EP+ Q + ++
Sbjct: 61 PSSVEKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLA 120
Query: 362 --MQEYTQSGGVRPFGVSLLI 418
E + RPFGVSLLI
Sbjct: 121 LRFGEGEEESMSRPFGVSLLI 141
>At1g53850.1 68414.m06129 20S proteasome alpha subunit E1 (PAE1)
identical to 20S proteasome subunit PAE1 GI:3421087 from
[Arabidopsis thaliana]
Length = 237
Score = 97.9 bits (233), Expect = 2e-21
Identities = 53/141 (37%), Positives = 74/141 (52%), Gaps = 3/141 (2%)
Frame = +2
Query: 5 VIMASERYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYD 184
+ + Y + TFSP G+L Q+EYA+ A+ G T++G+K GVV+A E + S L +
Sbjct: 1 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLE 60
Query: 185 EHSVNKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVANV- 361
SV K+ I HIG SG+ D R LV AR Q + Y EP+ Q + ++
Sbjct: 61 PSSVEKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLA 120
Query: 362 --MQEYTQSGGVRPFGVSLLI 418
E + RPFGVSLLI
Sbjct: 121 LRFGEGEEESMSRPFGVSLLI 141
>At2g05840.1 68415.m00632 20S proteasome alpha subunit A2 (PAA2)
identical to GB:AF043519
Length = 246
Score = 95.5 bits (227), Expect = 1e-20
Identities = 50/132 (37%), Positives = 77/132 (58%), Gaps = 1/132 (0%)
Frame = +2
Query: 26 YSFSLTTFSPSGKLVQIEYALAAV-AAGGTSVGIKASNGVVIATENKHKSILYDEHSVNK 202
Y +T FSP G+L Q+EYA AV AAG TS+G++ + V + T+ K L D+ SV+
Sbjct: 9 YDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVSH 68
Query: 203 VEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVANVMQEYTQS 382
+ +T ++G++ +GM D R LV QAR A ++ Y +P L + +A+ Q YTQ
Sbjct: 69 LFPVTKYLGLLATGMTADSRSLVQQARNEAAEFRFQYGYEMPADILAKWIADKSQVYTQH 128
Query: 383 GGVRPFGVSLLI 418
+RP GV ++
Sbjct: 129 AYMRPLGVVAMV 140
>At5g35590.1 68418.m04237 20S proteasome alpha subunit A1 (PAA1)
(PRC1) identical to proteasome subunit alpha type 6-1
SP:O81146 GI:12643647 from [Arabidopsis thaliana];
identical to cDNA proteasome subunit prc1 GI:2511587
Length = 246
Score = 94.7 bits (225), Expect = 2e-20
Identities = 51/132 (38%), Positives = 75/132 (56%), Gaps = 1/132 (0%)
Frame = +2
Query: 26 YSFSLTTFSPSGKLVQIEYALAAV-AAGGTSVGIKASNGVVIATENKHKSILYDEHSVNK 202
Y +T FSP G+L Q+EYA AV AG TS+G++ + V + T+ K L D+ SV
Sbjct: 9 YDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVTH 68
Query: 203 VEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVANVMQEYTQS 382
+ IT +IG+V +G+ D R LV QAR A ++ Y +P L + +A+ Q YTQ
Sbjct: 69 LFPITKYIGLVATGITADARSLVQQARNQAAEFRFTYGYEMPVDILAKWIADKSQVYTQH 128
Query: 383 GGVRPFGVSLLI 418
+RP GV ++
Sbjct: 129 AYMRPLGVVAMV 140
>At2g27020.1 68415.m03244 20S proteasome alpha subunit G (PAG1)
(PRC8) identical to proteasome subunit alpha type 3
SP:O23715, GI:12644056 from [Arabidopsis thaliana];
identical to cDNA proteasome subunit prc8 GI:2511591
Length = 249
Score = 93.5 bits (222), Expect = 5e-20
Identities = 47/131 (35%), Positives = 74/131 (56%)
Frame = +2
Query: 26 YSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKV 205
Y S+TTFSP G++ QIEYA AV GT VGIK +G+V+ E S + S ++
Sbjct: 8 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVVGIKCKDGIVMGVEKLIASKMMLPGSNRRI 67
Query: 206 EMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVANVMQEYTQSG 385
+ H GM +G+ D R +V +A+ A+ Y +Y + +P +L +RVA+ + T
Sbjct: 68 HSVHRHAGMAVAGLAADGRQIVARAKSEARSYESVYGDAVPVKELSERVASYVHLCTLYW 127
Query: 386 GVRPFGVSLLI 418
+RPFG +++
Sbjct: 128 WLRPFGCGVIL 138
>At5g42790.1 68418.m05212 20S proteasome alpha subunit F1 (PAF1)
(gb|AAC32062.1)
Length = 278
Score = 91.5 bits (217), Expect = 2e-19
Identities = 48/136 (35%), Positives = 77/136 (56%)
Frame = +2
Query: 11 MASERYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEH 190
M +Y +TT+SP+G+L Q+EYA+ AV G ++G+++ + VV+A NK +S L H
Sbjct: 1 MFRNQYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSEL-SSH 59
Query: 191 SVNKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVANVMQE 370
K+ + HIG+ +G+ D R+L R + + Y P+P +LV +A+ Q
Sbjct: 60 Q-RKIFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQV 118
Query: 371 YTQSGGVRPFGVSLLI 418
TQ RP+GV LL+
Sbjct: 119 CTQRSWKRPYGVGLLV 134
>At1g47250.1 68414.m05231 20S proteasome alpha subunit F2 (PAF2)
(PRC2B) (PRS1) identical to GB:AAC32063 from
[Arabidopsis thaliana] (Genetics 149 (2), 677-692
(1998)); identical to cDNA proteasome subunit prc2b
GI:2511585
Length = 277
Score = 91.5 bits (217), Expect = 2e-19
Identities = 48/136 (35%), Positives = 77/136 (56%)
Frame = +2
Query: 11 MASERYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEH 190
M +Y +TT+SP+G+L Q+EYA+ AV G ++G+++ + VV+A NK +S L H
Sbjct: 1 MFRNQYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSEL-SSH 59
Query: 191 SVNKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVANVMQE 370
K+ + HIG+ +G+ D R+L R + + Y P+P +LV +A+ Q
Sbjct: 60 Q-RKIFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQV 118
Query: 371 YTQSGGVRPFGVSLLI 418
TQ RP+GV LL+
Sbjct: 119 CTQRSWKRPYGVGLLV 134
>At4g31300.1 68417.m04441 20S proteasome beta subunit A (PBA1)
(PRCD) identical to cDNA proteasome subunit prcd
GI:2511593
Length = 233
Score = 33.9 bits (74), Expect = 0.046
Identities = 20/98 (20%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Frame = +2
Query: 104 GGTSVGIKASNGVVIATENKHKSILY-DEHSVNKVEMITGHIGMVYSGMGPDYRLLVTQA 280
G T +G+ + GVV+ +++ + +Y + +K+ +T ++ + SG D +++
Sbjct: 12 GTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADSQVVSDYV 71
Query: 281 RKMAQQYYLMYHEPIP---TAQLVQRVANVMQEYTQSG 385
R Q+ + + +P +A L++ +A + Q+G
Sbjct: 72 RYFLHQHTIQHGQPATVKVSANLIRMLAYNNKNMLQTG 109
>At2g27680.1 68415.m03354 aldo/keto reductase family protein
contains Pfam profile PF00248: oxidoreductase, aldo/keto
reductase family
Length = 384
Score = 31.1 bits (67), Expect = 0.32
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +2
Query: 68 VQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKVEMIT 217
V + Y L GG+ +G++ I N S++ DE VN ++ +T
Sbjct: 315 VAVRYVLDQQGVGGSMIGVRLGLAEHIQDANAIFSLVLDEEDVNSIQEVT 364
>At5g28490.1 68418.m03466 expressed protein contains Pfam profile
PF04852: Protein of unknown function (DUF640)
Length = 190
Score = 29.5 bits (63), Expect = 0.98
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = +3
Query: 270 SHKPGKWPNSTT*CT---TSRYPQRSWSSEWRTSCKNILN 380
SH+P K PNS+T T +SRY + +W T C+ + N
Sbjct: 5 SHQPNKNPNSSTQLTPPSSSRYENQK-RRDWNTFCQYLRN 43
>At5g26200.1 68418.m03118 mitochondrial substrate carrier family
protein contains Pfam profile: PF00153 mitochondrial
carrier protein
Length = 342
Score = 29.5 bits (63), Expect = 0.98
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 6/99 (6%)
Frame = +2
Query: 23 RYSFSLTTFSPSGKLVQIEYALAAVAAGGTSV------GIKASNGVVIATENKHKSILYD 184
RY S +G V ++ AA A+G +++ IK V+ A EN + +
Sbjct: 233 RYKHSYNHKEDAGGSVVVQALSAATASGCSALVTMPVDTIKTRLQVLDAEENGRRRAMTV 292
Query: 185 EHSVNKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQY 301
SV + M G +G Y G+GP + + A M Y
Sbjct: 293 MQSVKSL-MKEGGVGACYRGLGPRWVSMSMSATTMITTY 330
>At4g35560.1 68417.m05053 expressed protein
Length = 917
Score = 28.3 bits (60), Expect = 2.3
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = +2
Query: 56 SGKLVQIEYALAAVAAGGTSVGIKASNGVVI 148
S +++Q+EY + +A+ G+ V + SNG ++
Sbjct: 76 SNQVIQLEYTIPYLASNGSRVSVGYSNGDIL 106
>At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1)
identical to peroxisome biogenesis protein PEX1
[Arabidopsis thaliana] gi|12006272|gb|AAG44817; contains
Pfam profile PF00004: ATPase, AAA family; identical to
cDNA peroxisome biogenesis protein PEX1 (PEX1) mRNA,
partial cds GI:12006271
Length = 1130
Score = 27.9 bits (59), Expect = 3.0
Identities = 20/54 (37%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = +1
Query: 208 NDYWPYRNGVLRHGP*LSSARHTSQENGPTVLPDVPRADTH-SAVGPASGERHA 366
+DY YRN GP A S E P L R D H PA+ ER A
Sbjct: 698 DDYGEYRNSSCGIGPLAFVASVQSLEQIPQTLSSSGRFDFHVQLAAPATSERGA 751
>At4g24350.1 68417.m03494 phosphorylase family protein contains Pfam
PF01048: Phosphorylase family
Length = 336
Score = 27.1 bits (57), Expect = 5.2
Identities = 11/45 (24%), Positives = 22/45 (48%)
Frame = +2
Query: 116 VGIKASNGVVIATENKHKSILYDEHSVNKVEMITGHIGMVYSGMG 250
VG+KA+ + +++ LYD V+ +M + + M + G
Sbjct: 246 VGLKAATAYIFVDNAAYRNFLYDTFGVSSSDMESSAVAMTCASNG 290
>At5g47580.1 68418.m05873 expressed protein strong similarity to
unknown protein (pir||E71441)
Length = 748
Score = 26.6 bits (56), Expect = 6.9
Identities = 9/21 (42%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = +3
Query: 243 AWAL-IIVCSSHKPGKWPNST 302
+W + ++VC HKP WP T
Sbjct: 595 SWQMNLMVCMKHKPSHWPIKT 615
>At4g14720.1 68417.m02264 expressed protein
Length = 315
Score = 26.6 bits (56), Expect = 6.9
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = +2
Query: 113 SVGIKASNGVVIATENKHKSILYDEHSVNKVEMITGHIGMVYSG 244
S S+G +A ++ HK++ S + + G + + YSG
Sbjct: 121 SAEFSGSSGQFVADKDSHKTVSVSPRSPAETNAVVGQMTIFYSG 164
>At4g12420.1 68417.m01964 multi-copper oxidase, putative (SKU5)
identical to multi-copper oxidase-related protein
(SKU5)(GI:18158154) [Arabidopsis thaliana]; similar to
pollen-specific protein precursor - common tobacco,
PIR2:S22495; contains Pfam profile: PF00394 Multicopper
oxidase
Length = 587
Score = 26.6 bits (56), Expect = 6.9
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 245 MGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVANV-MQEYTQSGG 388
+G Y LVT + + YY++ + + +RV V + +YT S G
Sbjct: 265 VGQSYSFLVTMDQNASSDYYIVASARVVNETIWRRVTGVGILKYTNSKG 313
>At5g18850.1 68418.m02240 expressed protein
Length = 99
Score = 26.2 bits (55), Expect = 9.1
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -2
Query: 379 LSIFLHDVRHSLDQLRCGYRLVVHQ 305
+S +HD+RH+ +R G +VH+
Sbjct: 37 ISATIHDIRHNKQSVREGISQIVHE 61
>At1g48930.1 68414.m05481 endo-1,4-beta-glucanase, putative /
cellulase, putative similar to endo-beta-1,4-glucanase
GI:4972236 from [Fragaria x ananassa]
Length = 627
Score = 26.2 bits (55), Expect = 9.1
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 2/111 (1%)
Frame = +2
Query: 14 ASERYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHS 193
A+ Y + TT+SP QIE+ L ++ + + + VI N K I
Sbjct: 515 AASSYKATPTTYSPKQSGAQIEF-LHSITSNWIAGNTRYYRHKVIIKNNSQKPI---SDL 570
Query: 194 VNKVEMITGHI-GMVYSGMGPDYRLLVTQ-ARKMAQQYYLMYHEPIPTAQL 340
K+E ++G I G+ +G Y+L Q + Q Y +Y + P A++
Sbjct: 571 KLKIEDLSGPIWGLNPTGQKYTYQLPQWQKTLRAGQAYDFVYVQGGPQAKV 621
>At1g34130.1 68414.m04234 oligosaccharyl transferase STT3 subunit,
putative similar to SP|P39007 Oligosaccharyl transferase
STT3 subunit {Saccharomyces cerevisiae}; contains Pfam
profile PF02516: Oligosaccharyl transferase STT3 subunit
Length = 735
Score = 26.2 bits (55), Expect = 9.1
Identities = 14/64 (21%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = +2
Query: 89 AAVAAGGTSVGIKASNGVVIATENKHKSIL---YDEHSVNKVEMITGHIGMVYSGMGPDY 259
+A+ GG +VG+ ++G + + S+L Y + + + ++ H +S DY
Sbjct: 329 SAILVGGVAVGVGTASGYISPWTGRFYSLLDPTYAKDHIPIIASVSEHQPTAWSSFMFDY 388
Query: 260 RLLV 271
+L+
Sbjct: 389 HILL 392
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,319,682
Number of Sequences: 28952
Number of extensions: 189465
Number of successful extensions: 534
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 527
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 655255392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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