Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_B15
(602 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g02670.1 68416.m00258 proline-rich family protein contains pr... 34 0.063
At1g05850.1 68414.m00612 chitinase-like protein 1 (CTL1) similar... 34 0.083
At1g72760.1 68414.m08413 protein kinase family protein contains ... 30 1.0
At5g41120.1 68418.m04999 esterase/lipase/thioesterase family pro... 29 1.8
At3g02930.1 68416.m00288 expressed protein ; expression support... 29 3.1
At1g47450.1 68414.m05260 expressed protein 29 3.1
At5g28480.1 68418.m03462 hypothetical protein 28 4.1
At2g12100.1 68415.m01300 Ulp1 protease family protein contains P... 28 4.1
At1g45090.1 68414.m05169 Ulp1 protease family protein similar to... 28 4.1
At5g64580.1 68418.m08116 AAA-type ATPase family protein similar ... 28 5.5
At4g29310.1 68417.m04190 expressed protein 28 5.5
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 28 5.5
At3g06520.1 68416.m00756 agenet domain-containing protein contai... 28 5.5
At5g58000.1 68418.m07256 phosphatase-related weak similarity to ... 27 7.2
At2g27570.1 68415.m03340 sulfotransferase family protein similar... 27 9.6
At2g13680.1 68415.m01508 glycosyl transferase family 48 protein ... 27 9.6
At1g64450.1 68414.m07306 proline-rich family protein contains pr... 27 9.6
>At3g02670.1 68416.m00258 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 217
Score = 34.3 bits (75), Expect = 0.063
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +3
Query: 9 GLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPGS 128
G+ G PG++ P++ G G PG G+PG+ G+PGS
Sbjct: 90 GIPGSPGFRLPFPFPSSPG-GNPGIPGIPGIPGLPGIPGS 128
Score = 30.3 bits (65), Expect = 1.0
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 9 GLTGEPGYKGDKGEPA-AVVYGQKGEPGPRGVPGIDGLPG 125
G+ G PG G G P + + PG +PGI G PG
Sbjct: 115 GIPGIPGLPGIPGSPGFRLPFPFPSSPGGGSIPGIPGSPG 154
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -2
Query: 124 PGRPSIPGTPRGPGSP 77
PG P IPG P PGSP
Sbjct: 114 PGIPGIPGLPGIPGSP 129
>At1g05850.1 68414.m00612 chitinase-like protein 1 (CTL1) similar to
class I chitinase GI:7798656 from [Halimolobos perplexa
var. perplexa]; contains Pfam profile PF00182: Chitinase
class I; identical to cDNA chitinase-like protein 1
(CTL1) CTL1-ELP1 allele GI:17226328
Length = 321
Score = 33.9 bits (74), Expect = 0.083
Identities = 11/39 (28%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = -1
Query: 326 ICSGAW-CTWWARWAISSSNTDFSSFTLYSLEALWTRRS 213
+C+ W C+WW+++ + + +D+ F +Y E L+++R+
Sbjct: 41 VCTQGWECSWWSKYCCNQTISDY--FQVYQFEQLFSKRN 77
>At1g72760.1 68414.m08413 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 697
Score = 30.3 bits (65), Expect = 1.0
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Frame = +3
Query: 375 PQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRK-FSTMPFLFCDL---NDVCNY 542
PQC HV+L D + D ++AH L + G C RK + D+ N + NY
Sbjct: 43 PQCVLIHVQLGDTGGHFHQDNPDEAHEFFLPFRGFCARKGIIAKEVILHDIDISNAIVNY 102
Query: 543 ASRN 554
+ N
Sbjct: 103 ITNN 106
>At5g41120.1 68418.m04999 esterase/lipase/thioesterase family
protein contains Interpro entry IPR000379
Length = 684
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = -3
Query: 249 PVFLGSLVDPEVLVVLADQGTLGLLSFLGHHSILEHQGHHLTLEDHLFQEHRVVL 85
PVFL +L + V+ LA + G + ++G+H +L + H + L H +E ++L
Sbjct: 400 PVFLSTLKNGAVVRSLAGIPSEGPVLYVGNHMLLGMELHAIAL--HFLKERNILL 452
>At3g02930.1 68416.m00288 expressed protein ; expression supported
by MPSS
Length = 806
Score = 28.7 bits (61), Expect = 3.1
Identities = 23/75 (30%), Positives = 37/75 (49%)
Frame = +1
Query: 76 KENQDHAVFLE*MVFQGQMVPLVLQD*MVPQE*KETEGSLVRKDNQDLRVHKASKEYRVN 255
KE +D ++L+ + + + L L+ M+ KETE + +N +LRV K +
Sbjct: 588 KEVEDEVIYLQETLREAKAETLKLKGKMLD---KETEFQSIVHENDELRV-KQDDSLKKI 643
Query: 256 EEKSVLLEEMAHLAH 300
+E S LLEE H
Sbjct: 644 KELSELLEEALAKKH 658
>At1g47450.1 68414.m05260 expressed protein
Length = 169
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Frame = +3
Query: 345 LVRHSQREVVPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYA----GSCVRK 491
++ RE++ + H +L +G+S +Y+ GN A ++D+ Y+ CVR+
Sbjct: 105 IINECCREILKMGKDCHFRLVEGWSAMYVYGNSIA-SKDIPYSKQSWNECVRR 156
>At5g28480.1 68418.m03462 hypothetical protein
Length = 1230
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = +3
Query: 6 SGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPGSD 131
SG GE G G GE G GE GP G G G G+D
Sbjct: 431 SGGDGEGGPSGGDGEGGPS--GGDGEGGPNGADGEGGPNGAD 470
>At2g12100.1 68415.m01300 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At5g28270, At2g05450,
At1g45090, At2g16180, At2g06750
Length = 1224
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = +3
Query: 6 SGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPGSD 131
SG GE G G GE G GE GP G G G G+D
Sbjct: 444 SGGDGEGGPSGGDGEGGPS--GGDGEGGPNGADGEGGPNGAD 483
>At1g45090.1 68414.m05169 Ulp1 protease family protein similar to
At5g28270, At2g12100, At2g05450, At2g16180, At2g06750;
contains Pfam profile PF02902: Ulp1 protease family,
C-terminal catalytic domain
Length = 1210
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = +3
Query: 6 SGLTGEPGYKGDKGEPAAVVYGQKGEPGPRGVPGIDGLPGSD 131
SG GE G G GE G GE GP G G G G+D
Sbjct: 435 SGGDGEGGPSGGDGEGGPS--GGDGEGGPNGADGEGGPNGAD 474
>At5g64580.1 68418.m08116 AAA-type ATPase family protein similar to
zinc dependent protease [Arabidopsis thaliana]
GI:7650138; contains Pfam profile PF00004: ATPase AAA
family
Length = 855
Score = 27.9 bits (59), Expect = 5.5
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 217 LRVHKASKEYRVNEEKSVLLEEMAHLAHQVHHAPLQ 324
L+VH +K +R +EK LL+E+A A LQ
Sbjct: 497 LKVHARNKFFRSEDEKEELLQEVAENTEDFTGAELQ 532
>At4g29310.1 68417.m04190 expressed protein
Length = 424
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -1
Query: 215 SWLSLRTREPSVS-FHSWGTIQSWSTRGTI 129
+WL LR VS + WG +++W RG I
Sbjct: 272 AWLILRPHGTCVSSWKPWGRLEAWRERGAI 301
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 27.9 bits (59), Expect = 5.5
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 321 TDYLTGILLVRHSQREVVPQCEPGHVKLW 407
T+ L+G++ +Q VV C GH+K+W
Sbjct: 487 TEPLSGLMF---TQESVVTACREGHIKIW 512
>At3g06520.1 68416.m00756 agenet domain-containing protein contains
Pfam PF05641: Agenet domain
Length = 466
Score = 27.9 bits (59), Expect = 5.5
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2
Query: 523 RSQKRNGIVLNFRTHEPAYPRSWLCA 446
R Q G ++ R+ E AY SW CA
Sbjct: 166 RDQYEKGALVEVRSEEKAYKGSWYCA 191
>At5g58000.1 68418.m07256 phosphatase-related weak similarity to CTD
phosphatase-like 3 [Arabidopsis thaliana] GI:22212705;
contains Pfam profiles PF02453: Reticulon, PF00533:
BRCA1 C Terminus (BRCT) domain, PF03031: NLI interacting
factor
Length = 1011
Score = 27.5 bits (58), Expect = 7.2
Identities = 20/62 (32%), Positives = 35/62 (56%)
Frame = -3
Query: 186 LGLLSFLGHHSILEHQGHHLTLEDHLFQEHRVVLVLLFDHKRLLQVHLYHLCSLVHQLNH 7
+GL+ +LG +L+ H +E+ + H+VV V D KR+L++ + +L +HQL
Sbjct: 379 MGLI-YLGLMFVLKSLIHRGMVEE---ERHKVVGVREEDVKRMLRLIMPYLNESLHQLRA 434
Query: 6 FF 1
F
Sbjct: 435 LF 436
>At2g27570.1 68415.m03340 sulfotransferase family protein similar to
steroid sulfotransferase from [Brassica napus]
GI:3420008, GI:3420006; contains Pfam profile PF00685:
Sulfotransferase domain
Length = 273
Score = 27.1 bits (57), Expect = 9.6
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -2
Query: 535 QTSLRSQKRNGIVLNFRTHEPAYPRSWLCAFSFPSIYNSE*PSHNFTCP 389
Q + + Q N IV +F P +WL A +F ++ S+ PSH+ P
Sbjct: 57 QKNFKPQDTNIIVASF----PKCGTTWLKALTFSLVHRSKHPSHDHHHP 101
>At2g13680.1 68415.m01508 glycosyl transferase family 48 protein
contains Pfam profile: PF02364 1,3-beta-glucan synthase
Length = 1923
Score = 27.1 bits (57), Expect = 9.6
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 441 EKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASR 551
EKAH D G VR+F T+ F + ++ + ASR
Sbjct: 71 EKAHRLDPSSGGRGVRQFKTLLFQRLERDNASSLASR 107
>At1g64450.1 68414.m07306 proline-rich family protein contains
proline rich extensins, INTERPRO:IPR0002965
Length = 342
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 124 PGRPSIPGTPRGPGSP 77
PG P P PR PGSP
Sbjct: 205 PGNPGAPIIPRNPGSP 220
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,930,096
Number of Sequences: 28952
Number of extensions: 270202
Number of successful extensions: 855
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 845
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1197101088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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