Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_B12
(576 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g44222.1 68414.m05107 hypothetical protein 47 8e-06
At5g28480.1 68418.m03462 hypothetical protein 41 7e-04
At2g12100.1 68415.m01300 Ulp1 protease family protein contains P... 41 7e-04
At1g45090.1 68414.m05169 Ulp1 protease family protein similar to... 41 7e-04
At3g05220.2 68416.m00570 heavy-metal-associated domain-containin... 37 0.011
At3g05220.1 68416.m00569 heavy-metal-associated domain-containin... 37 0.011
At2g37410.2 68415.m04588 mitochondrial import inner membrane tra... 34 0.078
At2g37410.1 68415.m04587 mitochondrial import inner membrane tra... 34 0.078
At4g22670.1 68417.m03272 tetratricopeptide repeat (TPR)-containi... 33 0.14
At3g02670.1 68416.m00258 proline-rich family protein contains pr... 32 0.24
At4g25630.1 68417.m03691 fibrillarin 2 (FIB2) identical to fibri... 30 0.96
At1g64450.1 68414.m07306 proline-rich family protein contains pr... 29 2.2
At4g18600.1 68417.m02755 expressed protein 27 6.8
At1g29380.1 68414.m03592 hypothetical protein 27 6.8
>At1g44222.1 68414.m05107 hypothetical protein
Length = 85
Score = 47.2 bits (107), Expect = 8e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +3
Query: 9 GFPGLDGRPGLNGMPGKFGPNGIPGKKGEIGDIGPMGSIGIPGARGLQGIQG 164
G PG+ G PG+ G+ G FG +G+ G+ G +G +G MG G+ G+ G+ G G
Sbjct: 6 GRPGMLGSPGMLGILGMFGISGMVGRLGILGRLGMMGIPGMLGSHGMLGNPG 57
Score = 45.6 bits (103), Expect = 2e-05
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = +3
Query: 27 GRPGLNGMPGKFGPNGIPGKKGEIGDIGPMGSIGIPGARGLQGIQGRVGLKG 182
GRPG+ G PG G G+ G G +G +G +G +G+ G G+ G G +G G
Sbjct: 6 GRPGMLGSPGMLGILGMFGISGMVGRLGILGRLGMMGIPGMLGSHGMLGNPG 57
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/52 (40%), Positives = 26/52 (50%)
Frame = +3
Query: 36 GLNGMPGKFGPNGIPGKKGEIGDIGPMGSIGIPGARGLQGIQGRVGLKGFEG 191
G G PG G G+ G G G G +G +GI G G+ GI G +G G G
Sbjct: 3 GRLGRPGMLGSPGMLGILGMFGISGMVGRLGILGRLGMMGIPGMLGSHGMLG 54
Score = 38.3 bits (85), Expect = 0.004
Identities = 19/44 (43%), Positives = 24/44 (54%)
Frame = +3
Query: 63 GPNGIPGKKGEIGDIGPMGSIGIPGARGLQGIQGRVGLKGFEGL 194
G G PG G G +G +G GI G G GI GR+G+ G G+
Sbjct: 3 GRLGRPGMLGSPGMLGILGMFGISGMVGRLGILGRLGMMGIPGM 46
Score = 32.3 bits (70), Expect = 0.24
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +3
Query: 9 GFPGLDGRPGLNGMPGKFGPNGIPGKKGEIGDIGPMGSIGIPGA 140
G G+ G G++GM G+ G G G G G +G G +G PG+
Sbjct: 15 GMLGILGMFGISGMVGRLGILGRLGMMGIPGMLGSHGMLGNPGS 58
>At5g28480.1 68418.m03462 hypothetical protein
Length = 1230
Score = 40.7 bits (91), Expect = 7e-04
Identities = 24/62 (38%), Positives = 30/62 (48%)
Frame = +3
Query: 3 ETGFPGLDGRPGLNGMPGKFGPNGIPGKKGEIGDIGPMGSIGIPGARGLQGIQGRVGLKG 182
E G G DG G +G G+ GP+G G+ G G G G G G G G G VG +
Sbjct: 418 EGGPSGGDGEGGPSGGDGEGGPSGGDGEGGPSGGDGEGGPNGADGEGGPNGADGEVGDEA 477
Query: 183 FE 188
F+
Sbjct: 478 FD 479
Score = 36.3 bits (80), Expect = 0.015
Identities = 21/56 (37%), Positives = 26/56 (46%)
Frame = +3
Query: 24 DGRPGLNGMPGKFGPNGIPGKKGEIGDIGPMGSIGIPGARGLQGIQGRVGLKGFEG 191
DG G +G G+ GP+G G+ G G G G G G G G G G G +G
Sbjct: 416 DGEGGPSGGDGEGGPSGGDGEGGPSGGDGEGGPSGGDGEGGPNGADGEGGPNGADG 471
>At2g12100.1 68415.m01300 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At5g28270, At2g05450,
At1g45090, At2g16180, At2g06750
Length = 1224
Score = 40.7 bits (91), Expect = 7e-04
Identities = 24/62 (38%), Positives = 30/62 (48%)
Frame = +3
Query: 3 ETGFPGLDGRPGLNGMPGKFGPNGIPGKKGEIGDIGPMGSIGIPGARGLQGIQGRVGLKG 182
E G G DG G +G G+ GP+G G+ G G G G G G G G G VG +
Sbjct: 431 EGGPSGGDGEGGPSGGDGEGGPSGGDGEGGPSGGDGEGGPNGADGEGGPNGADGEVGDEA 490
Query: 183 FE 188
F+
Sbjct: 491 FD 492
Score = 36.3 bits (80), Expect = 0.015
Identities = 21/56 (37%), Positives = 26/56 (46%)
Frame = +3
Query: 24 DGRPGLNGMPGKFGPNGIPGKKGEIGDIGPMGSIGIPGARGLQGIQGRVGLKGFEG 191
DG G +G G+ GP+G G+ G G G G G G G G G G G +G
Sbjct: 429 DGEGGPSGGDGEGGPSGGDGEGGPSGGDGEGGPSGGDGEGGPNGADGEGGPNGADG 484
>At1g45090.1 68414.m05169 Ulp1 protease family protein similar to
At5g28270, At2g12100, At2g05450, At2g16180, At2g06750;
contains Pfam profile PF02902: Ulp1 protease family,
C-terminal catalytic domain
Length = 1210
Score = 40.7 bits (91), Expect = 7e-04
Identities = 24/62 (38%), Positives = 30/62 (48%)
Frame = +3
Query: 3 ETGFPGLDGRPGLNGMPGKFGPNGIPGKKGEIGDIGPMGSIGIPGARGLQGIQGRVGLKG 182
E G G DG G +G G+ GP+G G+ G G G G G G G G G VG +
Sbjct: 422 EGGPSGGDGEGGPSGGDGEGGPSGGDGEGGPSGGDGEGGPNGADGEGGPNGADGEVGDEA 481
Query: 183 FE 188
F+
Sbjct: 482 FD 483
Score = 36.3 bits (80), Expect = 0.015
Identities = 21/56 (37%), Positives = 26/56 (46%)
Frame = +3
Query: 24 DGRPGLNGMPGKFGPNGIPGKKGEIGDIGPMGSIGIPGARGLQGIQGRVGLKGFEG 191
DG G +G G+ GP+G G+ G G G G G G G G G G G +G
Sbjct: 420 DGEGGPSGGDGEGGPSGGDGEGGPSGGDGEGGPSGGDGEGGPNGADGEGGPNGADG 475
>At3g05220.2 68416.m00570 heavy-metal-associated domain-containing
protein similar to farnesylated protein 1 (GI:23304411)
{Hordeum vulgare subsp. spontaneum}; contains Pfam
profile PF00403: Heavy-metal-associated domain
Length = 478
Score = 36.7 bits (81), Expect = 0.011
Identities = 20/52 (38%), Positives = 26/52 (50%)
Frame = +3
Query: 36 GLNGMPGKFGPNGIPGKKGEIGDIGPMGSIGIPGARGLQGIQGRVGLKGFEG 191
G+ G G GP G G G +G GPMG +G G + G G +G G +G
Sbjct: 321 GIGG--GPMGPGGPMGPGGPMGQGGPMGMMGPGGPMSMMGPGGPMGPMGGQG 370
Score = 30.3 bits (65), Expect = 0.96
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = +3
Query: 18 GLDGRPGLNGMPGKFGPNGIPGKKGEIGDIGPMGSIG--IPGARGL 149
G G G G G GP G G G +GPMG G P +GL
Sbjct: 334 GPGGPMGQGGPMGMMGPGGPMSMMGPGGPMGPMGGQGGSYPAVQGL 379
>At3g05220.1 68416.m00569 heavy-metal-associated domain-containing
protein similar to farnesylated protein 1 (GI:23304411)
{Hordeum vulgare subsp. spontaneum}; contains Pfam
profile PF00403: Heavy-metal-associated domain
Length = 577
Score = 36.7 bits (81), Expect = 0.011
Identities = 20/52 (38%), Positives = 26/52 (50%)
Frame = +3
Query: 36 GLNGMPGKFGPNGIPGKKGEIGDIGPMGSIGIPGARGLQGIQGRVGLKGFEG 191
G+ G G GP G G G +G GPMG +G G + G G +G G +G
Sbjct: 420 GIGG--GPMGPGGPMGPGGPMGQGGPMGMMGPGGPMSMMGPGGPMGPMGGQG 469
Score = 30.3 bits (65), Expect = 0.96
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = +3
Query: 18 GLDGRPGLNGMPGKFGPNGIPGKKGEIGDIGPMGSIG--IPGARGL 149
G G G G G GP G G G +GPMG G P +GL
Sbjct: 433 GPGGPMGQGGPMGMMGPGGPMSMMGPGGPMGPMGGQGGSYPAVQGL 478
>At2g37410.2 68415.m04588 mitochondrial import inner membrane
translocase (TIM17) nearly identical to SP|Q9SP35
Mitochondrial import inner membrane translocase subunit
TIM17 {Arabidopsis thaliana}
Length = 243
Score = 33.9 bits (74), Expect = 0.078
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 3 ETGFPGLDGRPGLNGMPGKFGPNGIPGKKG 92
+ G G+ G G+ GMPG G G+PG +G
Sbjct: 147 DPGMQGMPGMQGMQGMPGMPGMQGMPGMQG 176
Score = 32.7 bits (71), Expect = 0.18
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 117 GSIGIPGARGLQGIQGRVGLKGFEGLQ 197
G G+PG +G+QG+ G G++G G+Q
Sbjct: 149 GMQGMPGMQGMQGMPGMPGMQGMPGMQ 175
Score = 31.5 bits (68), Expect = 0.42
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +3
Query: 33 PGLNGMPGKFGPNGIPGKKGEIGDIGPMG 119
PG+ GMPG G G+PG G G G G
Sbjct: 148 PGMQGMPGMQGMQGMPGMPGMQGMPGMQG 176
Score = 30.3 bits (65), Expect = 0.96
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 78 PGKKGEIGDIGPMGSIGIPGARGLQGIQG 164
PG +G G G G G+PG +G+ G+QG
Sbjct: 148 PGMQGMPGMQGMQGMPGMPGMQGMPGMQG 176
Score = 28.3 bits (60), Expect = 3.9
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 132 PGARGLQGIQGRVGLKGFEGLQ 197
PG +G+ G+QG G+ G G+Q
Sbjct: 148 PGMQGMPGMQGMQGMPGMPGMQ 169
>At2g37410.1 68415.m04587 mitochondrial import inner membrane
translocase (TIM17) nearly identical to SP|Q9SP35
Mitochondrial import inner membrane translocase subunit
TIM17 {Arabidopsis thaliana}
Length = 243
Score = 33.9 bits (74), Expect = 0.078
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 3 ETGFPGLDGRPGLNGMPGKFGPNGIPGKKG 92
+ G G+ G G+ GMPG G G+PG +G
Sbjct: 147 DPGMQGMPGMQGMQGMPGMPGMQGMPGMQG 176
Score = 32.7 bits (71), Expect = 0.18
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 117 GSIGIPGARGLQGIQGRVGLKGFEGLQ 197
G G+PG +G+QG+ G G++G G+Q
Sbjct: 149 GMQGMPGMQGMQGMPGMPGMQGMPGMQ 175
Score = 31.5 bits (68), Expect = 0.42
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +3
Query: 33 PGLNGMPGKFGPNGIPGKKGEIGDIGPMG 119
PG+ GMPG G G+PG G G G G
Sbjct: 148 PGMQGMPGMQGMQGMPGMPGMQGMPGMQG 176
Score = 30.3 bits (65), Expect = 0.96
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 78 PGKKGEIGDIGPMGSIGIPGARGLQGIQG 164
PG +G G G G G+PG +G+ G+QG
Sbjct: 148 PGMQGMPGMQGMQGMPGMPGMQGMPGMQG 176
Score = 28.3 bits (60), Expect = 3.9
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 132 PGARGLQGIQGRVGLKGFEGLQ 197
PG +G+ G+QG G+ G G+Q
Sbjct: 148 PGMQGMPGMQGMQGMPGMPGMQ 169
>At4g22670.1 68417.m03272 tetratricopeptide repeat (TPR)-containing
protein similar to Hsc70-interacting protein (Hip) from
{Homo sapiens} SP|P50502, {Rattus norvegicus} SP|P50503;
contains Pfam profile PF00515: tetratricopeptide repeat
(TPR) domain
Length = 441
Score = 33.1 bits (72), Expect = 0.14
Identities = 24/57 (42%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +3
Query: 9 GFPGLDGRPGLNGMPGKFGPNGIPG--KKGEIGDIGPMGSIGIPGARGLQGIQGRVG 173
GFPG G G+ GMPG F P G+ G G G + MG G+P G G+ G G
Sbjct: 319 GFPG--GMGGMGGMPGGF-PGGMGGGMPAGMGGGMPGMGG-GMPAGMGGGGMPGAGG 371
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 27 GRPGLNG-MPGKFGPNGIPGKKGEIGDIGPMGSIGIPG 137
G PG+ G MP G G+PG G G G G+PG
Sbjct: 349 GMPGMGGGMPAGMGGGGMPGAGG-----GMPGGGGMPG 381
>At3g02670.1 68416.m00258 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 217
Score = 32.3 bits (70), Expect = 0.24
Identities = 20/53 (37%), Positives = 24/53 (45%)
Frame = +3
Query: 27 GRPGLNGMPGKFGPNGIPGKKGEIGDIGPMGSIGIPGARGLQGIQGRVGLKGF 185
G PG+ G PG P P G G+ GIPG G+ G+ G G GF
Sbjct: 87 GNPGIPGSPGFRLPFPFPSSPG--------GNPGIPGIPGIPGLPGIPGSPGF 131
Score = 30.7 bits (66), Expect = 0.73
Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Frame = +3
Query: 9 GFPGLDGRPGLNGMPGKFG---PNGIPGKKGEIGDIGPMGSI-GIPGARGLQ 152
G PG+ G PGL G+PG G P P G GSI GIPG+ G +
Sbjct: 112 GIPGIPGIPGLPGIPGSPGFRLPFPFPSSPGG-------GSIPGIPGSPGFR 156
Score = 30.3 bits (65), Expect = 0.96
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +3
Query: 27 GRPGLNGMPGKFGPNGIPGKKGEIGDIGPMGSIGIPGARGLQGIQGRVGLK 179
G PG+ G+PG G+PG G G P PG + GI G G +
Sbjct: 109 GNPGIPGIPGI---PGLPGIPGSPGFRLPFPFPSSPGGGSIPGIPGSPGFR 156
Score = 28.3 bits (60), Expect = 3.9
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3
Query: 64 PNFPGIPLSPGRPSRPGKP 8
P PGIP PG P PG P
Sbjct: 111 PGIPGIPGIPGLPGIPGSP 129
>At4g25630.1 68417.m03691 fibrillarin 2 (FIB2) identical to
fibrillarin 2 GI:9965655 from [Arabidopsis thaliana]
Length = 320
Score = 30.3 bits (65), Expect = 0.96
Identities = 28/66 (42%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Frame = +3
Query: 9 GFPGLDGRPGLNGMPGKFGPNGIPGKKGEIG-----DIGPMG-SIGIP--GARGLQGIQG 164
GF G GR G +G G G +G G G G D G G G P GARG +G G
Sbjct: 11 GFSGGRGRGGYSGGRGDGGFSGGRGGGGRGGGRGFSDRGGRGRGRGPPRGGARGGRGPAG 70
Query: 165 RVGLKG 182
R G+KG
Sbjct: 71 RGGMKG 76
>At1g64450.1 68414.m07306 proline-rich family protein contains
proline rich extensins, INTERPRO:IPR0002965
Length = 342
Score = 29.1 bits (62), Expect = 2.2
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3
Query: 64 PNFPGIPLSPGRPSRPGKP 8
P FPG P SP P PG P
Sbjct: 166 PYFPGYPESPDLPGNPGSP 184
Score = 28.7 bits (61), Expect = 2.9
Identities = 21/54 (38%), Positives = 23/54 (42%)
Frame = +3
Query: 12 FPGLDGRPGLNGMPGKFGPNGIPGKKGEIGDIGPMGSIGIPGARGLQGIQGRVG 173
FPG G G PG GP G PG G GP ++G A G RVG
Sbjct: 244 FPGNPRSMGPPGFPGIGGPPGFPGTPFGGGGTGP--TLGDGYANPGFGYGNRVG 295
>At4g18600.1 68417.m02755 expressed protein
Length = 1907
Score = 27.5 bits (58), Expect = 6.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 381 LGAPGSCLRKFSTMPYMFCNLNN 449
+G PGSCLRK+S + L+N
Sbjct: 153 VGGPGSCLRKYSDPTFFRKELSN 175
>At1g29380.1 68414.m03592 hypothetical protein
Length = 228
Score = 27.5 bits (58), Expect = 6.8
Identities = 19/58 (32%), Positives = 23/58 (39%)
Frame = +3
Query: 9 GFPGLDGRPGLNGMPGKFGPNGIPGKKGEIGDIGPMGSIGIPGARGLQGIQGRVGLKG 182
G+P LDG G P +G P G++G G G PG G G G G
Sbjct: 73 GYPPLDGTTPTGGYPPLYGTT--PPGGGDVGGGGGGYGGGTPGGGGGGGGDTGAGAGG 128
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,323,164
Number of Sequences: 28952
Number of extensions: 235514
Number of successful extensions: 672
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 647
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1121903184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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