Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_B09
(527 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein si... 56 1e-08
At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein si... 50 1e-06
At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein si... 48 5e-06
At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein si... 46 2e-05
At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein si... 45 4e-05
At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein si... 38 0.004
At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein si... 37 0.007
At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein si... 33 0.090
At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein si... 32 0.21
At2g39720.1 68415.m04874 zinc finger (C3HC4-type RING finger) fa... 30 1.1
At1g65850.1 68414.m07472 disease resistance protein (TIR-NBS-LRR... 29 1.5
At1g23270.1 68414.m02911 hypothetical protein 29 2.6
At5g35840.1 68418.m04306 phytochrome C (PHYC) identical to SP|P1... 28 3.4
At5g10650.1 68418.m01233 zinc finger (C3HC4-type RING finger) fa... 28 3.4
At2g18650.1 68415.m02173 zinc finger (C3HC4-type RING finger) fa... 28 3.4
At1g65780.1 68414.m07465 tRNA-splicing endonuclease positive eff... 28 3.4
At4g37110.1 68417.m05256 expressed protein 28 4.5
At4g15075.1 68417.m02316 hypothetical protein 28 4.5
At1g13540.1 68414.m01587 expressed protein 28 4.5
At5g56340.1 68418.m07032 zinc finger (C3HC4-type RING finger) fa... 27 5.9
At2g46160.1 68415.m05740 zinc finger (C3HC4-type RING finger) fa... 27 5.9
At5g42870.1 68418.m05225 lipin family protein contains Pfam prof... 23 6.3
At5g44260.1 68418.m05416 zinc finger (CCCH-type) family protein ... 27 7.8
At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1) id... 27 7.8
>At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 398
Score = 56.4 bits (130), Expect = 1e-08
Identities = 31/114 (27%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
Frame = +1
Query: 184 TDLEPALSFCTHLLYKSAGIQADTYKMVSLNENLDIDRAHANYRAITN-LKRQFPQLRVF 360
TD++ +L THL A ++A++Y++ N A + A T ++++ P ++
Sbjct: 21 TDIDSSLF--THLFCTFADLEAESYEITIATWN------QAPFHAFTETVQQRNPHVKTL 72
Query: 361 LTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLPKRK 522
L++GG + +D + + +P +R +F S + +A YGF G+DL W+ P+ +
Sbjct: 73 LSIGGGNADKDA--FASMASNPDSRASFIQSTITVARSYGFHGLDLDWEYPRNE 124
>At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 379
Score = 49.6 bits (113), Expect = 1e-06
Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Frame = +1
Query: 184 TDLEPALSFCTHLLYKSAGIQADTYKMVSLNENLDIDRAHANYRAITN-LKRQFPQLRVF 360
TD++ +L THL A + + T ++ + N + T ++R+ P ++
Sbjct: 42 TDIDSSLF--THLFCAFADLNSQTNQVTVSSAN------QPKFSTFTQTVQRRNPSVKTL 93
Query: 361 LTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLP 513
L++GG D Y + +P +R +F +S++ +A YGF G+DL W+ P
Sbjct: 94 LSIGGG--IADKTAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDWEYP 142
>At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 363
Score = 47.6 bits (108), Expect = 5e-06
Identities = 29/101 (28%), Positives = 52/101 (51%)
Frame = +1
Query: 214 THLLYKSAGIQADTYKMVSLNENLDIDRAHANYRAITNLKRQFPQLRVFLTVGGDDDTED 393
THL A + T +V + ++ +N+ I +K++ P ++ L++GG + D
Sbjct: 39 THLFCAFADLDPQTNSVVVSGAH---EQEFSNFTKI--VKKKNPHVQTLLSIGGRN--AD 91
Query: 394 PQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLPK 516
+ + +P +R +F SA+ A Y FDG+DL W+ PK
Sbjct: 92 KSAFASMASNPTSRKSFIWSAISSARYYRFDGLDLVWKYPK 132
>At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 366
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Frame = +1
Query: 205 SFCTHLLYKSAGIQADTYKMVSLNENLDIDRAHANYRAITN-LKRQFPQLRVFLTVGGDD 381
S THL A I TY+++ + N + T ++R+ P ++ L++GGD
Sbjct: 45 SLFTHLFCAFADINTLTYQVIVSSRN------KPKFSTFTQTVRRRNPTVKTLLSIGGDF 98
Query: 382 DTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLP 513
+ + +P +R F +S++ LA GF G+DL+W+ P
Sbjct: 99 TYNFA--FASMASNPTSRKLFISSSIKLARSCGFHGLDLNWKYP 140
>At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:505267 from [Nicotiana
tabacum]
Length = 332
Score = 44.8 bits (101), Expect = 4e-05
Identities = 35/139 (25%), Positives = 68/139 (48%), Gaps = 2/139 (1%)
Frame = +1
Query: 103 SPSSQSKVLCYYDSKSYIRESQARMLPTDLEPALSFCTHLLYKSAGIQADTYKMVSLNEN 282
SPS++ K ++ E+Q + + P+ F THL A + A+++K+
Sbjct: 9 SPSAEVKASYWFPDG----ETQDPITSAETIPSALF-THLFCAFADLDANSHKVF----- 58
Query: 283 LDIDRAHAN-YRAITN-LKRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSA 456
+ +AH + T +K + PQ++ L++GG + + + + Q+R F +S
Sbjct: 59 --VSQAHEFIFSTFTETVKIRNPQVKTLLSIGGKNANNSA--FASMASNHQSRKTFIDSW 114
Query: 457 LLLAEQYGFDGIDLSWQLP 513
+ +A GF G+DL+W+ P
Sbjct: 115 IFIARSNGFHGLDLAWEYP 133
>At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 261
Score = 37.9 bits (84), Expect = 0.004
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 412 LLESPQARTAFTNSALLLAEQYGFDGIDLSWQLPK 516
+ S R +F S + +A YGFDG+DL W+ P+
Sbjct: 1 MASSSYGRKSFILSTISIARSYGFDGLDLDWEYPR 35
>At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:505267 from [Nicotiana
tabacum]
Length = 365
Score = 37.1 bits (82), Expect = 0.007
Identities = 30/126 (23%), Positives = 58/126 (46%), Gaps = 1/126 (0%)
Frame = +1
Query: 139 DSKSYIRESQARMLPTDLEPALSFCTHLLYKSAGIQADTYKMVSLNENLDIDRAHANYRA 318
D KS E ++ P+ + F THL A + + T+++ N + +
Sbjct: 22 DGKSQSPECLSQGTPSSFIDSTLF-THLFCAFADVDSSTHEVTISAAN------SYQFSS 74
Query: 319 ITN-LKRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGID 495
T +K + ++ L++GG D D + + + R AF +S++ +A + F G+D
Sbjct: 75 FTETVKEKNTDVQTLLSIGGKD--ADKAVLASMASNSKNRKAFIDSSIDIARKKDFYGLD 132
Query: 496 LSWQLP 513
L+W+ P
Sbjct: 133 LAWEYP 138
>At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 362
Score = 33.5 bits (73), Expect = 0.090
Identities = 17/62 (27%), Positives = 34/62 (54%)
Frame = +1
Query: 328 LKRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQ 507
+K + ++ L++GG D D + + + R AF +S++ +A + F G+DL+W+
Sbjct: 71 VKDKNTDVQTLLSIGGKD--ADKAVLASMASNSKNRKAFIDSSIDIARKKDFYGLDLAWE 128
Query: 508 LP 513
P
Sbjct: 129 YP 130
>At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 289
Score = 32.3 bits (70), Expect = 0.21
Identities = 11/34 (32%), Positives = 23/34 (67%)
Frame = +1
Query: 412 LLESPQARTAFTNSALLLAEQYGFDGIDLSWQLP 513
++ + +R +F +S++ +A GF G+DL+W+ P
Sbjct: 79 IVSNRTSRESFISSSISIARSLGFYGLDLAWEYP 112
>At2g39720.1 68415.m04874 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 401
Score = 29.9 bits (64), Expect = 1.1
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +2
Query: 101 HHLVAKAKSSATMTARAISEN-LKHVCCLRTWSLLFRSAPICCTNLPASKLT 253
H V K +AR + N + H C+ W + S P+C LPA LT
Sbjct: 200 HCAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIRNSCPVCRHELPAEDLT 251
>At1g65850.1 68414.m07472 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1036
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 206 RSAPICCTNLPASKLTHIKWFHSM 277
RS PIC T P+S +H KW H +
Sbjct: 13 RSCPICATPFPSSSSSH-KWTHQV 35
>At1g23270.1 68414.m02911 hypothetical protein
Length = 180
Score = 28.7 bits (61), Expect = 2.6
Identities = 30/113 (26%), Positives = 47/113 (41%), Gaps = 1/113 (0%)
Frame = -1
Query: 512 GNCQDRSIPSKPYCSARRRAEL-VKAVRACGDSNKRLYFCGSSVSSSPPTVKNTRN*GNC 336
G D ++P+ P RR L V + S K+L +S++S P K R +
Sbjct: 36 GFTDDTALPTNPETRLRRLKSLPVSRTDSVSSSPKKLLSHSNSMASHPE--KKYRGNVSS 93
Query: 335 LFKFVIAR*LACARSMSKFSLSETILYVSAWMPADLYSRWVQNERAGSKSVGS 177
+ F I +C S + ET ++ + SR E +GSK +GS
Sbjct: 94 VSSFSIQVGKSCPLDSS---VEETQIFSKTKRNQSVKSRGGLGESSGSKRIGS 143
>At5g35840.1 68418.m04306 phytochrome C (PHYC) identical to SP|P14714
Phytochrome C {Arabidopsis thaliana}
Length = 1111
Score = 28.3 bits (60), Expect = 3.4
Identities = 24/89 (26%), Positives = 38/89 (42%)
Frame = -1
Query: 446 VKAVRACGDSNKRLYFCGSSVSSSPPTVKNTRN*GNCLFKFVIAR*LACARSMSKFSLSE 267
V ++R GD+ + ++ SS R G C+ VIAR A + M + L
Sbjct: 987 VSSMRLYGDNLRLQQILSETLLSSIRFTPALR--GLCVSFKVIARIEAIGKRMKRVELEF 1044
Query: 266 TILYVSAWMPADLYSRWVQNERAGSKSVG 180
I++ + +P DL Q R G+ G
Sbjct: 1045 RIIHPAPGLPEDLVREMFQPLRKGTSREG 1073
>At5g10650.1 68418.m01233 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 525
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 181 PTDLEPALSFCTHLLYKSAG 240
PTD P+LSFC +Y S G
Sbjct: 321 PTDPNPSLSFCPSNIYSSTG 340
>At2g18650.1 68415.m02173 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 finger protein RHX1a
[Arabidopsis thaliana] GI:3790591; contains Pfam profile
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 423
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 170 HVCCLRTWSLLFRSAPICCTNLPASKLTH 256
HV C+ TW L + P+C +NL + +H
Sbjct: 150 HVECIDTWLLSHSTCPLCRSNLLSGFSSH 178
>At1g65780.1 68414.m07465 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 1065
Score = 28.3 bits (60), Expect = 3.4
Identities = 23/86 (26%), Positives = 38/86 (44%)
Frame = +1
Query: 220 LLYKSAGIQADTYKMVSLNENLDIDRAHANYRAITNLKRQFPQLRVFLTVGGDDDTEDPQ 399
LL+ +A A Y + + L ID A +++ Q P LR + VG +
Sbjct: 547 LLFSTASCSARLYTGTPI-QLLVIDEAAQLKECESSIPMQLPGLRHLILVGDERQLPAMV 605
Query: 400 KYNLLLESPQARTAFTNSALLLAEQY 477
+ + LE+ R+ F ALL ++Y
Sbjct: 606 ESQIALEAGFGRSLFERLALLGHKKY 631
>At4g37110.1 68417.m05256 expressed protein
Length = 417
Score = 27.9 bits (59), Expect = 4.5
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -2
Query: 265 PFYMCQLGCRQICTADGCRTKEQAPSP*AAY-VLEIL*YSSCCH 137
P ++C + CR IC CRTK+ AAY + L Y S H
Sbjct: 228 PDWICPV-CRDICNCSFCRTKKGWLPTGAAYRKIHKLGYKSVAH 270
>At4g15075.1 68417.m02316 hypothetical protein
Length = 168
Score = 27.9 bits (59), Expect = 4.5
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +2
Query: 164 LKHVCCLRTWSLLFRSAP 217
L++ CCL+T ++LF+S P
Sbjct: 126 LRNACCLKTATILFKSTP 143
>At1g13540.1 68414.m01587 expressed protein
Length = 381
Score = 27.9 bits (59), Expect = 4.5
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 346 QLRVFLTVGGDDDTEDPQKYNLLLESPQARTAF 444
+L V +GGDD T DP + +L+ P + +
Sbjct: 65 KLAVTFNIGGDDSTRDPVVFIPVLDKPLSSNCY 97
>At5g56340.1 68418.m07032 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 396
Score = 27.5 bits (58), Expect = 5.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 170 HVCCLRTWSLLFRSAPICCTNLPAS 244
HV C+ W L S P+C LP+S
Sbjct: 282 HVRCIVPWLELHSSCPVCRFELPSS 306
>At2g46160.1 68415.m05740 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 zinc finger protein
ATL6 [Arabidopsis thaliana] GI:4928403; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 214
Score = 27.5 bits (58), Expect = 5.9
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +2
Query: 170 HVCCLRTWSLLFRSAPIC 223
H+CCL W L S P+C
Sbjct: 162 HLCCLDAWLKLNGSCPVC 179
>At5g42870.1 68418.m05225 lipin family protein contains Pfam
profile: PF04571 lipin, N-terminal conserved region
Length = 930
Score = 23.0 bits (47), Expect(2) = 6.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 202 LSFCTHLLYKSAGIQADTYKMVSLNENLDIDR 297
LS C HLL S G+ A+ +E LD+++
Sbjct: 542 LSLCKHLL--SEGMGAEAASQAFNSEKLDMEK 571
Score = 22.6 bits (46), Expect(2) = 6.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 97 PASPSSQSKVLCYYDSKSYIRESQARMLPTDLE 195
P+ P SQS C+ SK +RE ++ D E
Sbjct: 486 PSQPLSQSFDPCFNTSKLDLREDESSSGGLDAE 518
>At5g44260.1 68418.m05416 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 381
Score = 27.1 bits (57), Expect = 7.8
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1
Query: 398 CGSSVSSSPPTVKNTRN*GNCLF 330
CG S SSSP +V + +N CLF
Sbjct: 177 CGGSPSSSPASVLSNKNNRCCLF 199
>At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1)
identical to peroxisome biogenesis protein PEX1
[Arabidopsis thaliana] gi|12006272|gb|AAG44817; contains
Pfam profile PF00004: ATPase, AAA family; identical to
cDNA peroxisome biogenesis protein PEX1 (PEX1) mRNA,
partial cds GI:12006271
Length = 1130
Score = 27.1 bits (57), Expect = 7.8
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +2
Query: 50 SPSPGYWR*RLRLPTTQHHLV-AKAKSSATMTARAISENLKHVCCLRTWSLLFRSAPICC 226
SP+ G W + ++P+ H L+ S T+ ARA ++ + LL + C
Sbjct: 578 SPAAGMWFSKFKIPSPGHILIYGPPGSGKTILARAAAKYFE-----EQKDLLAHVILVSC 632
Query: 227 TNLPASKLTHI 259
+ L K+ HI
Sbjct: 633 STLALEKVQHI 643
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,771,316
Number of Sequences: 28952
Number of extensions: 207775
Number of successful extensions: 655
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 977150592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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