Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_B06
         (574 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           27   0.43 
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         24   3.1  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    24   4.0  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   7.1  
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          23   7.1  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   7.1  

>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 27.1 bits (57), Expect = 0.43
 Identities = 20/69 (28%), Positives = 29/69 (42%)
 Frame = +3

Query: 93  PEERAPAAPAQSAGKPRGRRTEPVDDDSAVKKFGSAKAISSAQFFGEQDSRWEKESNLSR 272
           P E A ++P  +   P     EP++  SAV    S+   S+      Q S     S+ S 
Sbjct: 63  PREHATSSPYHAPPSPANSHYEPMECHSAV---NSSSNSSTGYLHQHQQSSSSSSSSSSS 119

Query: 273 FQGSTSISS 299
              S+S SS
Sbjct: 120 SMSSSSSSS 128


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 446 SIGQGGQPTSYPGDPSPDRLPDLV 375
           S+  G QP S  GDP+  + P ++
Sbjct: 265 SVSNGEQPASSVGDPANPQQPSVI 288


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +2

Query: 38  HRTEHRAGGVTRRAHHVH 91
           H   HR+GG  R  HH H
Sbjct: 421 HLHNHRSGGGGRHHHHHH 438


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 12/48 (25%), Positives = 21/48 (43%)
 Frame = +3

Query: 15  PASYSASDTVQNIEPEVSRAVHTMFTPEERAPAAPAQSAGKPRGRRTE 158
           PA+ +A   VQ    ++   +     PE +    P+Q+ G  R   T+
Sbjct: 29  PATAAAPQPVQRPYGKIVLTLENCLLPEVKLDQTPSQNDGLDRETETD 76


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 12/48 (25%), Positives = 21/48 (43%)
 Frame = +3

Query: 15  PASYSASDTVQNIEPEVSRAVHTMFTPEERAPAAPAQSAGKPRGRRTE 158
           PA+ +A   VQ    ++   +     PE +    P+Q+ G  R   T+
Sbjct: 29  PATAAAPQPVQRPYGKIVLTLENCLLPEVKLDQTPSQNDGLDRETETD 76


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 10/22 (45%), Positives = 12/22 (54%), Gaps = 2/22 (9%)
 Frame = -3

Query: 446 SIGQGGQ--PTSYPGDPSPDRL 387
           S+G  G   P  YPG P P+ L
Sbjct: 472 SVGMPGPQGPRGYPGQPGPEGL 493


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 460,871
Number of Sequences: 2352
Number of extensions: 7483
Number of successful extensions: 19
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54245403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)