Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_B06
(574 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g17890.1 68417.m02666 human Rev interacting-like family prote... 70 1e-12
At5g46750.1 68418.m05759 human Rev interacting-like family prote... 61 6e-10
At2g35210.1 68415.m04319 human Rev interacting-like family prote... 56 2e-08
At2g35210.2 68415.m04318 human Rev interacting-like family prote... 36 0.015
At4g07493.1 68417.m01156 hypothetical protein 30 1.3
At3g28790.1 68416.m03593 expressed protein 29 1.7
At3g11450.1 68416.m01396 DNAJ heat shock N-terminal domain-conta... 29 2.2
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 29 2.9
At1g63590.1 68414.m07188 receptor-like protein kinase-related co... 29 2.9
At4g08013.1 68417.m01283 hypothetical protein low similarity to ... 28 3.8
At2g44700.1 68415.m05563 kelch repeat-containing F-box family pr... 28 3.8
At5g22090.1 68418.m02572 expressed protein 28 5.1
At1g70130.1 68414.m08070 lectin protein kinase, putative similar... 28 5.1
At1g63530.1 68414.m07182 hypothetical protein 28 5.1
At3g44200.1 68416.m04739 protein kinase family protein contains ... 27 6.7
At3g14980.1 68416.m01894 PHD finger transcription factor, putati... 27 6.7
At2g31370.3 68415.m03832 bZIP transcription factor (POSF21) iden... 27 8.9
At2g31370.2 68415.m03834 bZIP transcription factor (POSF21) iden... 27 8.9
At2g31370.1 68415.m03833 bZIP transcription factor (POSF21) iden... 27 8.9
At2g16770.1 68415.m01923 expressed protein 27 8.9
At1g16610.2 68414.m01990 arginine/serine-rich protein, putative ... 27 8.9
At1g16610.1 68414.m01989 arginine/serine-rich protein, putative ... 27 8.9
>At4g17890.1 68417.m02666 human Rev interacting-like family protein
/ hRIP family protein contains InterPro accession
IPR001164: Human Rev interacting-like protein (hRIP)
Length = 413
Score = 69.7 bits (163), Expect = 1e-12
Identities = 53/161 (32%), Positives = 87/161 (54%), Gaps = 11/161 (6%)
Frame = +3
Query: 21 SYSASDTVQNIEPEVSRAVHTMFTPEERAPAAPAQSAGKPRGRRTEPVDDDSAVKKFGSA 200
S + + ++ P S + + F + P + ++ K ++ + D A KKF +A
Sbjct: 262 SVGGTQVLNHVAPPKSSSFFSDFGMDSSFPKKSSSNSSK-----SQVEESDEARKKFTNA 316
Query: 201 KAISSAQFFGEQDSRWEKES--NLSRFQGSTSISSADYFGSDGQRPAQRNSAFNVSAPDL 374
K+ISSAQ+FG+Q+ + ES L +F GS SISSAD++G D Q +S +++A DL
Sbjct: 317 KSISSAQYFGDQNKNADLESKATLQKFAGSASISSADFYGHD-----QDDSNIDITASDL 371
Query: 375 DEVRESVRA-----GVTRVAG----RLSSLANGVVSSIQER 470
R S +A + +AG +L +LA+G+ S IQ+R
Sbjct: 372 IN-RLSFQAQQDLSSLVNIAGETKKKLGTLASGIFSDIQDR 411
>At5g46750.1 68418.m05759 human Rev interacting-like family protein
/ hRIP family protein contains Pfam profile PF01412:
Putative GTP-ase activating protein for Arf
Length = 402
Score = 60.9 bits (141), Expect = 6e-10
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 5/153 (3%)
Frame = +3
Query: 27 SASDTVQNIEPEVSRAVHTMFTPEERAPAAPAQSAGKPRGRRTEPVDDDSAVKKFGSAKA 206
S + + ++ P S F + P + S+ K + T D A KKF +AK+
Sbjct: 253 SGTRVLSHVAPPKSSNFFNEFGMDSAFPKKSSSSSSKAQVEET-----DEARKKFSNAKS 307
Query: 207 ISSAQFFGEQ--DSRWEKESNLSRFQGSTSISSADYFG---SDGQRPAQRNSAFNVSAPD 371
ISSAQFFG Q D+ + ++ L +F GS +ISS+D FG D + N +
Sbjct: 308 ISSAQFFGNQNRDADLDSKATLQKFSGSAAISSSDLFGHGPDDSNIDITASDLINRISFQ 367
Query: 372 LDEVRESVRAGVTRVAGRLSSLANGVVSSIQER 470
+ S+ +L + A+ + S +Q+R
Sbjct: 368 AQQDMSSIANLAEETKNKLGTFASSIFSDLQDR 400
>At2g35210.1 68415.m04319 human Rev interacting-like family protein
/ hRIP family protein similar to ARFGAP1 protein
GI:7211442 from [Homo sapiens]; contains InterPro
accession IPR001164: Human Rev interacting-like protein
(hRIP)
Length = 395
Score = 55.6 bits (128), Expect = 2e-08
Identities = 42/115 (36%), Positives = 60/115 (52%), Gaps = 12/115 (10%)
Frame = +3
Query: 24 YSASDTVQNIEPEVSRAVHTMFTP-------EERAPAAPAQSAGKP--RGRRTEPVDDDS 176
+ +D VQN E +S V + P EE + KP + + + D
Sbjct: 238 FDYADNVQNREDYMSPQVVSHVAPPKSSGFFEEELEMNGGRFQKKPITSSSKLQIQETDE 297
Query: 177 AVKKFGSAKAISSAQFFGEQDSR--WEKESNLSRFQGSTSISSADYFG-SDGQRP 332
A KKF +AK+ISSAQ+FG ++ E +S+L +F GS++ISSAD FG DG P
Sbjct: 298 ARKKFTNAKSISSAQYFGNDNNSADLEAKSSLKKFSGSSAISSADLFGDGDGDFP 352
>At2g35210.2 68415.m04318 human Rev interacting-like family protein
/ hRIP family protein similar to ARFGAP1 protein
GI:7211442 from [Homo sapiens]; contains InterPro
accession IPR001164: Human Rev interacting-like protein
(hRIP)
Length = 371
Score = 36.3 bits (80), Expect = 0.015
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 11/98 (11%)
Frame = +3
Query: 24 YSASDTVQNIEPEVSRAVHTMFTP-------EERAPAAPAQSAGKP--RGRRTEPVDDDS 176
+ +D VQN E +S V + P EE + KP + + + D
Sbjct: 238 FDYADNVQNREDYMSPQVVSHVAPPKSSGFFEEELEMNGGRFQKKPITSSSKLQIQETDE 297
Query: 177 AVKKFGSAKAISSAQFFGEQDSR--WEKESNLSRFQGS 284
A KKF +AK+ISSAQ+FG ++ E +S+L +F S
Sbjct: 298 ARKKFTNAKSISSAQYFGNDNNSADLEAKSSLKKFSQS 335
>At4g07493.1 68417.m01156 hypothetical protein
Length = 158
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +3
Query: 135 KPRGRRTEPVDDDSAVKKFGSAKAISSAQFFGEQDSRWEKESNLSRFQGSTSISSADYFG 314
KP GRR E VD+DS ++ S K + G+ D E E + +R + + D+ G
Sbjct: 100 KPVGRRLELVDEDSK-EEMASPKEADQTERGGDDD--LESEKSATRNESYKLLKHNDFLG 156
Query: 315 S 317
+
Sbjct: 157 T 157
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 29.5 bits (63), Expect = 1.7
Identities = 31/128 (24%), Positives = 50/128 (39%), Gaps = 2/128 (1%)
Frame = +3
Query: 90 TPEERAPAAPAQSAGKPRGRRTEPVDDDSAVKKFGSAKAISSAQFFGEQDSRWE--KESN 263
TP AP+ PA G+ +E + +++KK ++K+ S + G E K S+
Sbjct: 307 TPSTPAPSTPA------AGKTSEKGSESASMKKESNSKSESESAASGSVSKTKETNKGSS 360
Query: 264 LSRFQGSTSISSADYFGSDGQRPAQRNSAFNVSAPDLDEVRESVRAGVTRVAGRLSSLAN 443
++ +T SS GS P S + A S A + AG +S
Sbjct: 361 GDTYKDTTGTSSGSPSGSPSGSPTPSTST-DGKASSKGSASASAGASASASAGASASAEE 419
Query: 444 GVVSSIQE 467
S +E
Sbjct: 420 SAASQKKE 427
>At3g11450.1 68416.m01396 DNAJ heat shock N-terminal
domain-containing protein / cell division
protein-related similar to GlsA [Volvox carteri f.
nagariensis] GI:4633129; contains Pfam profiles PF00226
DnaJ domain, PF00249 Myb-like DNA-binding domain
Length = 663
Score = 29.1 bits (62), Expect = 2.2
Identities = 26/102 (25%), Positives = 42/102 (41%), Gaps = 5/102 (4%)
Frame = +3
Query: 102 RAPAAPA--QSAGKPRGRRTEPVDDDSAVKKFGSAKAISSAQFFGEQDSRWEKESNLSR- 272
R PA A +A K G EP DD+ KK G K F ++ +K+S +
Sbjct: 64 REPAGHAFHSAALKLHGCAEEPTDDEGGDKKVGDDKEKEYVPSFNSYANKGKKKSGTQQQ 123
Query: 273 -FQGSTSISSADYFGSDGQ-RPAQRNSAFNVSAPDLDEVRES 392
+S+ Y ++ Q R + R +A L + +E+
Sbjct: 124 DHYALLGLSNLRYLATEDQIRKSYREAALKHHPDKLAKAKEA 165
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +1
Query: 196 PLKRSARRSSSVNRIRDGRRNRIYLDSKAARASRQRTTSGPT 321
PL+RS+RRS S + +R RR+ L + SR+ + PT
Sbjct: 514 PLRRSSRRSPSRSPVRSSRRS---LSRSPIQLSRRSLSRSPT 552
>At1g63590.1 68414.m07188 receptor-like protein kinase-related
contains Pfam PF01657: Domain of unknown function;
similar to receptor-like protein kinase 4 (GI:13506745)
{Arabidopsis thaliana}
Length = 268
Score = 28.7 bits (61), Expect = 2.9
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Frame = +3
Query: 162 VDDDSAVKKFGSAKAISSAQFFGEQDSRWEKESNLSRFQGSTSISSADYFGSDGQRPAQR 341
V+D + +F + ++ S QFF + + EK L +S YF D Q Q
Sbjct: 133 VEDVPSTARFSTGNSLDSPQFFSQ--TLLEKLDALILRASLSSSLPVPYFVDDQQHVTQL 190
Query: 342 NSAFNVSA-----PDLDEVRESV--RAGVTRVAG 422
++++ A PDLD +V R V R++G
Sbjct: 191 EGSYDLHAMVQCSPDLDPRNCTVCLRLAVQRLSG 224
>At4g08013.1 68417.m01283 hypothetical protein low similarity to
SCARECROW [Zea mays] GI:10178637
Length = 113
Score = 28.3 bits (60), Expect = 3.8
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +3
Query: 15 PASYSASDTVQNIEPEVSRAVHTMFTPEERAPAAPAQS 128
PA+ S T Q ++P R+ F P AP QS
Sbjct: 42 PAAAPQSSTTQRVDPPPPRSEEAQFNPPPEAPLNQEQS 79
>At2g44700.1 68415.m05563 kelch repeat-containing F-box family
protein contains Pfam PF00646: F-box domain; contains
Pfam PF01344 : Kelch motif;
Length = 368
Score = 28.3 bits (60), Expect = 3.8
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 119 WCRRCSFLRCEHGVHGA 69
WCR LR E G+HGA
Sbjct: 328 WCRMIGLLRSEVGIHGA 344
>At5g22090.1 68418.m02572 expressed protein
Length = 463
Score = 27.9 bits (59), Expect = 5.1
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 282 STSISSADYFGSDGQRPAQRNSAFNVSAPDLDEVRESVRAGV 407
S +SS + +G P +R S+ PD +E E R+GV
Sbjct: 44 SADLSSKTWVSQNGFSPMKRISSSEKLRPDEEEAEEESRSGV 85
>At1g70130.1 68414.m08070 lectin protein kinase, putative similar to
receptor lectin kinase 3 [Arabidopsis thaliana]
gi|4100060|gb|AAD00733
Length = 656
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -1
Query: 346 EFLCAGRCPSDPK*SADEMLVLPWNLDRFDSFSHLESCSPK 224
E C GR P P+ S EM++ W LD +DS L+ K
Sbjct: 527 EITC-GRRPIGPRGSPSEMVLTDWVLDCWDSGDILQVVDEK 566
>At1g63530.1 68414.m07182 hypothetical protein
Length = 499
Score = 27.9 bits (59), Expect = 5.1
Identities = 33/112 (29%), Positives = 48/112 (42%), Gaps = 1/112 (0%)
Frame = +3
Query: 15 PASYSASDTVQNIEPEVSRAVHTMFTPEERAPAAP-AQSAGKPRGRRTEPVDDDSAVKKF 191
PAS S+S T + +V ++F P + P A + P R E A F
Sbjct: 146 PASSSSSSTSTVVFGTTPVSVSSLFGPSQDFPKTTFACCSSTPAPTRCEC---SFAKPFF 202
Query: 192 GSAKAISSAQFFGEQDSRWEKESNLSRFQGSTSISSADYFGSDGQRPAQRNS 347
GS+ A SS+ FG S + S F G+++ S + FG Q P +S
Sbjct: 203 GSSPASSSSNLFGPNPS----TTTASVF-GTSATSGSSLFG-PAQHPLSYDS 248
>At3g44200.1 68416.m04739 protein kinase family protein contains
protein kinase domain, Pfam:PF00069; contains
serine/threonine protein kinase domain,
INTERPRO:IPR002290
Length = 941
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +3
Query: 54 EPEVSRAVHTMFTPEERAPAAPAQSAGKPRGRRTEPVDDDSAVKKFGSAKAISSAQ 221
E EV + +P R+ + S +PR + +P+ + S K F S S A+
Sbjct: 787 EMEVRKGATPSESPTTRSIISEPDSRTEPRPKEPDPITNYSETKSFNSCSDSSPAE 842
>At3g14980.1 68416.m01894 PHD finger transcription factor, putative
contains Pfam profile: PF00628 PHD-finger
Length = 1189
Score = 27.5 bits (58), Expect = 6.7
Identities = 22/91 (24%), Positives = 34/91 (37%)
Frame = -1
Query: 475 PYRSCIEDTTPLAREDNRPATRVTPARTDSRTSSRSGAETLKAEFLCAGRCPSDPK*SAD 296
P+ SC + + R R+ A D G E +C CPS +
Sbjct: 694 PFASCQLEAWSAEYKARRNGWRLEKASDDDPNDDSCGVCGDGGELICCDNCPSTFHQACL 753
Query: 295 EMLVLPWNLDRFDSFSHLESCSPKNCAELIA 203
M VLP + + SC+ C+EL++
Sbjct: 754 SMQVLP------EGSWYCSSCTCWICSELVS 778
>At2g31370.3 68415.m03832 bZIP transcription factor (POSF21)
identical to GB:Q04088
Length = 279
Score = 27.1 bits (57), Expect = 8.9
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +3
Query: 186 KFGSAKAISSAQFFGEQDSRWEKESNLSRFQGSTSISSADYFGSDGQRPAQRN 344
KF S+ A SSAQ + W+ E+ + GSTS + + S G+RP R+
Sbjct: 107 KFNSS-ATSSAQVGEPSGTAWKNETMMQTGTGSTS-NPQNTVNSLGERPRIRH 157
>At2g31370.2 68415.m03834 bZIP transcription factor (POSF21)
identical to GB:Q04088
Length = 398
Score = 27.1 bits (57), Expect = 8.9
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +3
Query: 186 KFGSAKAISSAQFFGEQDSRWEKESNLSRFQGSTSISSADYFGSDGQRPAQRN 344
KF S+ A SSAQ + W+ E+ + GSTS + + S G+RP R+
Sbjct: 107 KFNSS-ATSSAQVGEPSGTAWKNETMMQTGTGSTS-NPQNTVNSLGERPRIRH 157
>At2g31370.1 68415.m03833 bZIP transcription factor (POSF21)
identical to GB:Q04088
Length = 398
Score = 27.1 bits (57), Expect = 8.9
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +3
Query: 186 KFGSAKAISSAQFFGEQDSRWEKESNLSRFQGSTSISSADYFGSDGQRPAQRN 344
KF S+ A SSAQ + W+ E+ + GSTS + + S G+RP R+
Sbjct: 107 KFNSS-ATSSAQVGEPSGTAWKNETMMQTGTGSTS-NPQNTVNSLGERPRIRH 157
>At2g16770.1 68415.m01923 expressed protein
Length = 249
Score = 27.1 bits (57), Expect = 8.9
Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +3
Query: 45 QNIEPEVSRAVHTMFTPEERAPAAPAQSAGKPRGRRTEPVDDDSAVKKFGSAKAISSAQF 224
+N VHT P++ + ++S+GK R P+ + AV+K+ K +A
Sbjct: 48 ENTHTHTCLHVHTKILPDKVSTDDTSESSGKKR-----PLGNREAVRKYREKKKAKAAS- 101
Query: 225 FGEQDSRWEKESN--LSRFQGSTSISS 299
++ R + +N L R QG ++ +
Sbjct: 102 LEDEVMRLKAVNNQLLKRLQGQAALEA 128
>At1g16610.2 68414.m01990 arginine/serine-rich protein, putative
(SR45) similar to arginine/serine-rich protein
GI:6601502 from [Arabidopsis thaliana]
Length = 407
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 458 RGHDSIGQGGQPTSYPGDPSPDRLP 384
+G G+ G+ +SY PSP R+P
Sbjct: 346 KGRGPAGRRGRSSSYSSSPSPRRIP 370
>At1g16610.1 68414.m01989 arginine/serine-rich protein, putative
(SR45) similar to arginine/serine-rich protein
GI:6601502 from [Arabidopsis thaliana]
Length = 414
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 458 RGHDSIGQGGQPTSYPGDPSPDRLP 384
+G G+ G+ +SY PSP R+P
Sbjct: 353 KGRGPAGRRGRSSSYSSSPSPRRIP 377
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,384,303
Number of Sequences: 28952
Number of extensions: 165402
Number of successful extensions: 687
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 676
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1112061928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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