Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_B02
         (413 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_4541| Best HMM Match : No HMM Matches (HMM E-Value=.)               37   0.008
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.12 
SB_19373| Best HMM Match : MFS_1 (HMM E-Value=3.36312e-44)             28   3.5  
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)              27   4.6  
SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10)                     27   6.1  
SB_1478| Best HMM Match : GAGE (HMM E-Value=1.6)                       27   6.1  
SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.1  
SB_2110| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   8.1  

>SB_4541| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 146

 Score = 36.7 bits (81), Expect = 0.008
 Identities = 18/48 (37%), Positives = 22/48 (45%)
 Frame = +2

Query: 224 YFYKKQKDQLPDLKPHLDKEINFHSDQFRRREDAFNRHKTKRAELEKK 367
           YF + Q  QL  LK H +  I  H  +    E+A  RHK      EKK
Sbjct: 91  YFRQMQAQQLAALKEHQEHLIATHKQEIEHHEEAIRRHKEALKSYEKK 138


>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2520

 Score = 32.7 bits (71), Expect = 0.12
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = +2

Query: 233 KKQKDQLPDLKPHLDKEINFHSDQFRRREDAFNRHKTKRAELE 361
           ++ K +L  L+ HL+ +IN    +  R+++A    + K  ELE
Sbjct: 795 ERSKSELEKLRAHLESDINEKEKEIERKDNALKEFQEKNKELE 837


>SB_19373| Best HMM Match : MFS_1 (HMM E-Value=3.36312e-44)
          Length = 472

 Score = 27.9 bits (59), Expect = 3.5
 Identities = 11/22 (50%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
 Frame = -3

Query: 336 WRLKASSRRL-NWSLWKFISLS 274
           W +KA S+RL +WS+WK+ + S
Sbjct: 248 WVIKAPSQRLLDWSVWKYPAFS 269


>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
          Length = 1866

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +2

Query: 233  KKQKDQLPDLKPHLDKEINFHSDQFRRREDAFNRHKTKRAELEKK 367
            KK+K++L       +KE     D+ +R+ +   R K K+ E EKK
Sbjct: 974  KKEKERLLQEDKLHEKEEKDRKDKEKRKVEKEKREKDKQVEKEKK 1018


>SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10)
          Length = 2155

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = +2

Query: 254  PDLKPHLDKEINFHSDQFRRREDAFNRHKTKRAELEKK 367
            P++    D ++  HSD  +R ++      +   ELE+K
Sbjct: 1019 PNIVKQSDSDLQGHSDSIKRLQEELKERNSAHQELEQK 1056


>SB_1478| Best HMM Match : GAGE (HMM E-Value=1.6)
          Length = 437

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = +3

Query: 273 WTKK*TSTVTNSGVAKTPSTATRPNGLNWRRSEHNTYHSSPSNYK 407
           W K+  S+V  SG A   S  T      WR+S  ++ H +  +++
Sbjct: 265 WNKRGRSSVHQSGTAMHSSKITAQVDSFWRKSVESSRHVNVGSFR 309


>SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 970

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +3

Query: 288 TSTVTNSGVAKTPSTATRPNGLNWRRSEHNTYHSSPS 398
           TS++     ++ PSTAT+ +G +    +H+T H S S
Sbjct: 133 TSSINTEATSRQPSTATQVSGPS-LPMQHSTEHHSTS 168


>SB_2110| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 137

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -1

Query: 299 HCGSLFLCPD-EVLNREVGLFVFYKSILLLWQPPF 198
           H    F+ P+ +V  R VGLF  Y++++ +W  P+
Sbjct: 33  HYLKTFVFPEGDVTKRGVGLFSDYQALMRIWTHPW 67


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,808,313
Number of Sequences: 59808
Number of extensions: 148268
Number of successful extensions: 631
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 631
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 764823134
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)