Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_B02
(413 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF326939-1|AAG49389.1| 109|Caenorhabditis elegans mitochondrial... 48 4e-06
AF038604-5|AAB92010.1| 109|Caenorhabditis elegans Hypothetical ... 48 4e-06
U49941-7|AAB53875.1| 88|Caenorhabditis elegans Mitochondrial a... 38 0.003
L12348-1|AAA28107.1| 88|Caenorhabditis elegans ATPase inhibito... 38 0.003
U41528-3|AAK39170.2| 594|Caenorhabditis elegans Kinesin-like pr... 30 0.76
AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical ... 29 1.3
AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical ... 29 1.3
Z83236-10|CAB05780.2| 236|Caenorhabditis elegans Hypothetical p... 27 4.1
Z81102-6|CAB03207.2| 571|Caenorhabditis elegans Hypothetical pr... 27 4.1
Z81102-4|CAB03204.2| 639|Caenorhabditis elegans Hypothetical pr... 27 4.1
Z69659-7|CAA93488.2| 571|Caenorhabditis elegans Hypothetical pr... 27 4.1
Z69659-6|CAA93486.2| 639|Caenorhabditis elegans Hypothetical pr... 27 4.1
AL137227-8|CAB70242.1| 258|Caenorhabditis elegans Hypothetical ... 26 9.4
AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical... 26 9.4
>AF326939-1|AAG49389.1| 109|Caenorhabditis elegans mitochondrial
ATPase inhibitor protein.
Length = 109
Score = 47.6 bits (108), Expect = 4e-06
Identities = 18/46 (39%), Positives = 28/46 (60%)
Frame = +2
Query: 224 YFYKKQKDQLPDLKPHLDKEINFHSDQFRRREDAFNRHKTKRAELE 361
YFYKKQK QL +L+ H+ +E+ H Q + RH+ + +E+E
Sbjct: 55 YFYKKQKAQLQELREHIQEEVKHHEGQLENHKKVLERHQQRISEIE 100
>AF038604-5|AAB92010.1| 109|Caenorhabditis elegans Hypothetical
protein B0546.1 protein.
Length = 109
Score = 47.6 bits (108), Expect = 4e-06
Identities = 18/46 (39%), Positives = 28/46 (60%)
Frame = +2
Query: 224 YFYKKQKDQLPDLKPHLDKEINFHSDQFRRREDAFNRHKTKRAELE 361
YFYKKQK QL +L+ H+ +E+ H Q + RH+ + +E+E
Sbjct: 55 YFYKKQKAQLQELREHIQEEVKHHEGQLENHKKVLERHQQRISEIE 100
>U49941-7|AAB53875.1| 88|Caenorhabditis elegans Mitochondrial
atpase inhibitorfamily protein 1 protein.
Length = 88
Score = 37.9 bits (84), Expect = 0.003
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +2
Query: 224 YFYKKQKDQLPDLKPHLDKEINFHSDQFRRREDAFNRHKTKRAELEK 364
YF ++QKDQL +LK L+ ++ + R E +H+ + E+EK
Sbjct: 38 YFRRQQKDQLDNLKKKLEADMTQSQQEIRDHEKVLEQHQQRLKEIEK 84
>L12348-1|AAA28107.1| 88|Caenorhabditis elegans ATPase inhibitor
protein.
Length = 88
Score = 37.9 bits (84), Expect = 0.003
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +2
Query: 224 YFYKKQKDQLPDLKPHLDKEINFHSDQFRRREDAFNRHKTKRAELEK 364
YF ++QKDQL +LK L+ ++ + R E +H+ + E+EK
Sbjct: 38 YFRRQQKDQLDNLKKKLEADMTQSQQEIRDHEKVLEQHQQRLKEIEK 84
>U41528-3|AAK39170.2| 594|Caenorhabditis elegans Kinesin-like
protein protein 8 protein.
Length = 594
Score = 29.9 bits (64), Expect = 0.76
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = +2
Query: 233 KKQKDQLPDLKPHLDKEINFHSDQFRRREDAFNRHKTKRAELEKK 367
+++ D+L D ++EIN ++ R +D+ K+KR ELE++
Sbjct: 357 EEKLDKLKDDISSREREINAQKEEVNRIKDSLRLEKSKRNELEEE 401
>AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical
protein C35E7.5b protein.
Length = 954
Score = 29.1 bits (62), Expect = 1.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 272 LDKEINFHSDQFRRREDAFNRHKTKRAELEKK 367
L+KE N H + ++ D+ + AELEKK
Sbjct: 522 LEKECNMHLESLKKMNDSRKEFEVLNAELEKK 553
>AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical
protein C35E7.5a protein.
Length = 1262
Score = 29.1 bits (62), Expect = 1.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 272 LDKEINFHSDQFRRREDAFNRHKTKRAELEKK 367
L+KE N H + ++ D+ + AELEKK
Sbjct: 522 LEKECNMHLESLKKMNDSRKEFEVLNAELEKK 553
>Z83236-10|CAB05780.2| 236|Caenorhabditis elegans Hypothetical
protein K10H10.4 protein.
Length = 236
Score = 27.5 bits (58), Expect = 4.1
Identities = 18/68 (26%), Positives = 31/68 (45%)
Frame = +1
Query: 187 CIRRNGGCQRRRILL*KTKRPTSRFKTSSGQRNKLPQ*PIQASRRRLQPPQDQTG*IGEE 366
C +GG R K K+P +F+ S + LP P + S + + ++ G I E+
Sbjct: 64 CSGGSGGGYYPRRRHHKHKKPRRKFRFDSDEDEDLPPPPPRKSAKISRVHSEEQGFIEEK 123
Query: 367 VNITHTIR 390
+T T +
Sbjct: 124 PRVTETTK 131
>Z81102-6|CAB03207.2| 571|Caenorhabditis elegans Hypothetical
protein F07C6.4c protein.
Length = 571
Score = 27.5 bits (58), Expect = 4.1
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +2
Query: 248 QLPDLKPHLDKEINFHSDQFRRREDAFNRHKTKRAELEKK 367
QLPD+ + N D+F++ ++ +R K ++AELE +
Sbjct: 30 QLPDVPEPNESLHNKTIDEFQKDQEKCDRLKARKAELEMR 69
>Z81102-4|CAB03204.2| 639|Caenorhabditis elegans Hypothetical
protein F07C6.4b protein.
Length = 639
Score = 27.5 bits (58), Expect = 4.1
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +2
Query: 248 QLPDLKPHLDKEINFHSDQFRRREDAFNRHKTKRAELEKK 367
QLPD+ + N D+F++ ++ +R K ++AELE +
Sbjct: 98 QLPDVPEPNESLHNKTIDEFQKDQEKCDRLKARKAELEMR 137
>Z69659-7|CAA93488.2| 571|Caenorhabditis elegans Hypothetical
protein F07C6.4c protein.
Length = 571
Score = 27.5 bits (58), Expect = 4.1
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +2
Query: 248 QLPDLKPHLDKEINFHSDQFRRREDAFNRHKTKRAELEKK 367
QLPD+ + N D+F++ ++ +R K ++AELE +
Sbjct: 30 QLPDVPEPNESLHNKTIDEFQKDQEKCDRLKARKAELEMR 69
>Z69659-6|CAA93486.2| 639|Caenorhabditis elegans Hypothetical
protein F07C6.4b protein.
Length = 639
Score = 27.5 bits (58), Expect = 4.1
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +2
Query: 248 QLPDLKPHLDKEINFHSDQFRRREDAFNRHKTKRAELEKK 367
QLPD+ + N D+F++ ++ +R K ++AELE +
Sbjct: 98 QLPDVPEPNESLHNKTIDEFQKDQEKCDRLKARKAELEMR 137
>AL137227-8|CAB70242.1| 258|Caenorhabditis elegans Hypothetical
protein F58D5.7 protein.
Length = 258
Score = 26.2 bits (55), Expect = 9.4
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 227 FYKKQKDQLPDLKPHLDKEINFHSDQFRRREDAFNRHKTKRAELEK 364
FYK +KD D+K +D+ + ++ +DA H T +EK
Sbjct: 121 FYKYEKDV--DMKDLMDQVTDMVHRTEKKEQDALEPHATDEQAIEK 164
>AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical
protein Y43F8C.16 protein.
Length = 370
Score = 26.2 bits (55), Expect = 9.4
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +3
Query: 288 TSTVTNSGVAKTPSTATRPN 347
TST+T++G + PST+T P+
Sbjct: 283 TSTITSTGSSNPPSTSTVPS 302
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,535,639
Number of Sequences: 27780
Number of extensions: 119650
Number of successful extensions: 398
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 398
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 673122114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -