Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_B01
         (492 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    23   2.3  
AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    21   5.4  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   9.4  
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    21   9.4  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    21   9.4  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    21   9.4  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    21   9.4  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    21   9.4  

>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +1

Query: 295 QMEDVNPPLDSWLFLFE*YMLYYS 366
           Q  D  P L+ WL++    + Y+S
Sbjct: 297 QESDYYPDLNEWLYILSGCLYYFS 320


>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
           finger domain-Z3 isoform protein.
          Length = 92

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 5/18 (27%), Positives = 11/18 (61%)
 Frame = +2

Query: 176 FRNNHSNCNIYYKCQYCD 229
           F++ H   +  Y C++C+
Sbjct: 25  FQDKHEQSDTLYVCEFCN 42


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +2

Query: 182 NNHSNCNIYYKCQYCDNN 235
           N  ++CNIY      +NN
Sbjct: 370 NRQNSCNIYNASSRMENN 387


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 182 NNHSNCNIYYKCQYCDN 232
           NN++  N  YK  YC+N
Sbjct: 87  NNYNYNNNNYKKLYCNN 103


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 182 NNHSNCNIYYKCQYCDN 232
           NN++  N  YK  YC+N
Sbjct: 87  NNYNYNNNNYKKLYCNN 103


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 182 NNHSNCNIYYKCQYCDN 232
           NN++  N  YK  YC+N
Sbjct: 87  NNYNYNNNNYKKLYCNN 103


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +2

Query: 182 NNHSNCNIYYKCQYCD 229
           NN++N  +YY   Y +
Sbjct: 319 NNYNNKKLYYNINYIE 334


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +1

Query: 70  VTSLTGVSVVYLANFVTLYLQLIR 141
           VTS+  +S  +  NFVT+ +Q ++
Sbjct: 299 VTSVRLISSGFFDNFVTVQIQPLK 322


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,552
Number of Sequences: 438
Number of extensions: 2612
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13544190
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)