Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_A23
         (112 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   1.5  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           19   4.7  

>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 20.6 bits (41), Expect = 1.5
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 44  PGRARHLPGPGRLAQEGLRHRG 109
           P  +   PG   L ++GLR +G
Sbjct: 11  PSASEAFPGGRTLVEKGLRKQG 32


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 19.0 bits (37), Expect = 4.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 56  RHLPGPGRLAQEGLRHR 106
           R LP P R + EGL+ +
Sbjct: 141 RPLPAPERPSFEGLKRQ 157


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,873
Number of Sequences: 336
Number of extensions: 211
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 17
effective length of database: 116,873
effective search space used:  2220587
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)