Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_A22
         (311 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g05470.1 68414.m00556 endonuclease/exonuclease/phosphatase fa...    29   0.66 
At2g47160.1 68415.m05889 anion exchange family protein contains ...    29   0.87 
At2g32010.1 68415.m03911 endonuclease/exonuclease/phosphatase fa...    29   0.87 
At3g62270.1 68416.m06996 anion exchange family protein contains ...    27   2.0  
At4g24640.1 68417.m03528 invertase/pectin methylesterase inhibit...    26   4.6  
At4g11980.1 68417.m01907 MutT/nudix family protein low similarit...    26   4.6  
At2g44090.1 68415.m05483 expressed protein                             25   8.1  

>At1g05470.1 68414.m00556 endonuclease/exonuclease/phosphatase
           family protein simlar to inositol polyphosphate
           5-phosphatase I (GI:10444261) and II (GI:10444263)
           [Arabidopsis thaliana]; contains Pfam profile PF03372:
           Endonuclease/Exonuclease/phosphatase family
          Length = 585

 Score = 29.1 bits (62), Expect = 0.66
 Identities = 17/52 (32%), Positives = 22/52 (42%)
 Frame = +3

Query: 144 MSNWVCLVENESGRFTDKIGKVTKNGSRDYGLFQINDKYWCSTGSTPGKDCH 299
           M NW  L+EN+  R   K G V K  +     F    KY  ++    G D H
Sbjct: 451 MQNWRALLENDQLRIEQKRGHVFKGWNEGKIYFPPTYKYSRNSDRYSGDDLH 502


>At2g47160.1 68415.m05889 anion exchange family protein contains
           some similarity to SWISS-PROT:P04919 anion transport
           protein (anion exchange protein 1) [Mouse] {Mus
           musculus}
          Length = 704

 Score = 28.7 bits (61), Expect = 0.87
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
 Frame = -3

Query: 174 RSRQGRP-SYSSNFHRSLV--F*APALIRIW*NVSHRNAKRVPKG 49
           RSR+ R   Y + + RSL+  +  P ++ +W  VS+  A  VPKG
Sbjct: 217 RSRKARSWRYGTGWLRSLIADYGVPLMVLVWTGVSYIPAGDVPKG 261


>At2g32010.1 68415.m03911 endonuclease/exonuclease/phosphatase
           family protein similar to inositol polyphosphate
           5-phosphatase I (GI:10444261) and II (GI:10444263)
           [Arabidopsis thaliana]; contains Pfam profile PF03372:
           Endonuclease/Exonuclease/phosphatase family
          Length = 594

 Score = 28.7 bits (61), Expect = 0.87
 Identities = 17/52 (32%), Positives = 22/52 (42%)
 Frame = +3

Query: 144 MSNWVCLVENESGRFTDKIGKVTKNGSRDYGLFQINDKYWCSTGSTPGKDCH 299
           M NW  L+EN+  R   K G V K  +     F    KY  ++    G D H
Sbjct: 460 MQNWRALLENDQLRIEQKRGHVFKGWNEGKIYFPPTYKYSNNSDRYAGGDLH 511


>At3g62270.1 68416.m06996 anion exchange family protein contains
           similarity to anion exchanger 3, cardiac splice form -
           Rattus norvegicus, PIR:A42497
          Length = 703

 Score = 27.5 bits (58), Expect = 2.0
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
 Frame = -3

Query: 174 RSRQGRP-SYSSNFHRSLV--F*APALIRIW*NVSHRNAKRVPKG 49
           RSR+ R   Y + + RSLV  +  P ++ +W  VS+     VPKG
Sbjct: 217 RSRKARSWRYGTGWLRSLVADYGVPLMVLVWTGVSYIPTGDVPKG 261


>At4g24640.1 68417.m03528 invertase/pectin methylesterase inhibitor
           family protein annotation temporarily based on
           supporting cDNA gi|4097527|gb|U63898.1|U63898
          Length = 187

 Score = 26.2 bits (55), Expect = 4.6
 Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
 Frame = -1

Query: 299 VAILSRSGPGAAPVFVIDLEEAVVSRSVLSHFTNFVGKPSAFVLD--KADPVTHQTFIE 129
           V  L+ + P AAP+ ++ L EAV++ ++ SH      K + FV +  K DP     F E
Sbjct: 47  VKTLTTNPPTAAPIGLLPLSEAVINLAI-SH----AEKTAIFVDETAKKDPTVKVAFTE 100


>At4g11980.1 68417.m01907 MutT/nudix family protein low similarity
           to SP|P54570 ADP-ribose pyrophosphatase (EC 3.6.1.13)
           {Bacillus subtilis}; contains Pfam profile PF00293:
           NUDIX domain
          Length = 309

 Score = 26.2 bits (55), Expect = 4.6
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +3

Query: 120 RQGFDESLMSNWVCLVENESGRFTD 194
           R   D SL  NW+  +E+ESG   D
Sbjct: 71  RDAIDSSLFRNWLRNLESESGILAD 95


>At2g44090.1 68415.m05483 expressed protein
          Length = 582

 Score = 25.4 bits (53), Expect = 8.1
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +3

Query: 138 SLMSNWVCLVENESGRFTDKIGKVTKNGSRDY 233
           SL S W    E+E    T+ I K+  +G++DY
Sbjct: 103 SLDSIWFLSTEHELRGITELIAKIICHGAQDY 134


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,651,732
Number of Sequences: 28952
Number of extensions: 112370
Number of successful extensions: 273
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 273
length of database: 12,070,560
effective HSP length: 70
effective length of database: 10,043,920
effective search space used: 331449360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)