Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_A21
(225 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC26H5.12 |rpo41||mitochondrial DNA-directed RNA polymerase|Sc... 28 0.19
SPBC691.02c |||RINT1 family protein|Schizosaccharomyces pombe|ch... 27 0.33
SPAC16E8.14c |||methyltransferase |Schizosaccharomyces pombe|chr... 25 1.0
SPCC1235.07 |fta7|sma7, cnl3|Sim4 and Mal2 associated |Schizosac... 25 1.8
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos... 24 2.4
SPBC31F10.05 |mug37||sequence orphan|Schizosaccharomyces pombe|c... 24 2.4
SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces p... 24 3.1
SPBC17D1.07c |||GTPase regulator |Schizosaccharomyces pombe|chr ... 24 3.1
SPCC1223.09 |||uricase |Schizosaccharomyces pombe|chr 3|||Manual 23 4.1
SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 23 4.1
SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter Trk2|Sch... 23 4.1
SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase Ppk30|Schizos... 23 5.4
SPCC965.11c |||amino acid transporter |Schizosaccharomyces pombe... 23 5.4
SPAC24H6.10c |||phospho-2-dehydro-3-deoxyheptonate aldolase |Sch... 23 5.4
SPCC338.07c |||NatA N-acetyltransferase complex subunit |Schizos... 23 5.4
SPAC18G6.05c |||translation elongation regulator Gcn1 |Schizosac... 23 7.2
SPAC869.02c |||nitric oxide dioxygenase |Schizosaccharomyces pom... 23 7.2
SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces ... 23 7.2
SPAPB1E7.02c |mcl1|slr3|DNA polymerase alpha accessory factor Mc... 23 7.2
SPAC3H8.05c |||conserved fungal protein|Schizosaccharomyces pomb... 22 9.5
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 22 9.5
>SPAC26H5.12 |rpo41||mitochondrial DNA-directed RNA
polymerase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1120
Score = 27.9 bits (59), Expect = 0.19
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +3
Query: 21 DFINRNDYSLDGKLNLFKTPTTSLDFNAGWKKFDTPF 131
DF R + D +F + LD N W K D PF
Sbjct: 721 DFATRQAFVDDNMQEVFDSADRPLDGNKWWSKADDPF 757
>SPBC691.02c |||RINT1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 678
Score = 27.1 bits (57), Expect = 0.33
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +2
Query: 44 LPGRKTESLQDSDHIAGLQRRLEEVRYAFH*VLVGTQH*FLVFQI 178
LPG S S I G Q RL+E+ +L+G+ ++QI
Sbjct: 526 LPGAALLSTSVSAEIVGFQSRLKEIIALLQKLLIGSSQCEAIYQI 570
>SPAC16E8.14c |||methyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 25.4 bits (53), Expect = 1.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 172 ENEKLVLGSHEDLMKGVSNFFQPALK 95
EN L + SH DL++ V NF A K
Sbjct: 72 ENVLLKIASHVDLVEPVENFISTAKK 97
>SPCC1235.07 |fta7|sma7, cnl3|Sim4 and Mal2 associated
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 244
Score = 24.6 bits (51), Expect = 1.8
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +3
Query: 12 AHTDFINRNDYSLDGKLNLFKTPTTSLDFNAGWKKFDTPFIK 137
+H +F + ND+S KLN + T+ +K+ PF K
Sbjct: 158 SHDNFSDSNDFSFQKKLNTEDSNTSKTSTLDMYKEKLKPFTK 199
>SPBC119.07 |ppk19||serine/threonine protein kinase
Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1706
Score = 24.2 bits (50), Expect = 2.4
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -3
Query: 220 ISLSFKLMTVLN*KYLENEKLVLGSHEDLMKGVSNFFQPALKSSDV 83
+S+SF ++T L+ K + E V SH G+ NF K+ +V
Sbjct: 1482 VSISFSVLTNLDNKEVNLEDAVPASHRS-ASGIVNFDVEKGKTEEV 1526
>SPBC31F10.05 |mug37||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 217
Score = 24.2 bits (50), Expect = 2.4
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -3
Query: 181 KYLENEKLVLGSHEDLMKGVSNFFQPALKSSDVVG 77
++LEN+KL L SHE+ + P K VG
Sbjct: 53 QFLENDKLDLNSHENEGEKTKTETVPTRKQFPKVG 87
>SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 254
Score = 23.8 bits (49), Expect = 3.1
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -3
Query: 127 GVSNFFQPALKSSD 86
G+S FQP LK+SD
Sbjct: 92 GISKSFQPVLKTSD 105
>SPBC17D1.07c |||GTPase regulator |Schizosaccharomyces pombe|chr
2|||Manual
Length = 962
Score = 23.8 bits (49), Expect = 3.1
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -3
Query: 175 LENEKLVLGSHEDLMKGVSNFF 110
L N+KL+ H + G+SN F
Sbjct: 726 LRNDKLIKSIHPGSLSGISNSF 747
>SPCC1223.09 |||uricase |Schizosaccharomyces pombe|chr 3|||Manual
Length = 296
Score = 23.4 bits (48), Expect = 4.1
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = +1
Query: 34 VTITPWTEN*ISSRLRPHRWTSTP 105
+TITPWT + + H + P
Sbjct: 105 ITITPWTRMEVQGKPHSHSFIRNP 128
>SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 345
Score = 23.4 bits (48), Expect = 4.1
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +3
Query: 27 INRNDYSLDGKLNLFKTPTTS 89
IN DY LD + F T TTS
Sbjct: 316 INETDYELDTSQSEFATLTTS 336
>SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter
Trk2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 880
Score = 23.4 bits (48), Expect = 4.1
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 109 GRSSIRLSLSPRGNPALVSRFPNISNL 189
G ++ LSL + +P+L ++F IS L
Sbjct: 799 GYGTVGLSLGYKNDPSLTAQFRKISKL 825
>SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase
Ppk30|Schizosaccharomyces pombe|chr 2|||Manual
Length = 953
Score = 23.0 bits (47), Expect = 5.4
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +1
Query: 4 RPPLTRTSSIVTITPWTEN*ISSRLRPHRWTSTPVGRSSIRLSLSPRGNPALVSRFPNIS 183
R PL RT S ++TP + + L P T SS ++ P P+L S+ P++S
Sbjct: 350 RAPLQRTPS-GSLTPLSSRPAHTSLPPIPTVQTT---SS---NVPPVNRPSLKSKSPSVS 402
Query: 184 NL 189
N+
Sbjct: 403 NI 404
>SPCC965.11c |||amino acid transporter |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 537
Score = 23.0 bits (47), Expect = 5.4
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +3
Query: 36 NDYSLDGKLNLFKTPTTSLDFNAGW 110
ND +L K+P T NAGW
Sbjct: 288 NDPNLSSGSKTLKSPMTIAIMNAGW 312
>SPAC24H6.10c |||phospho-2-dehydro-3-deoxyheptonate aldolase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 368
Score = 23.0 bits (47), Expect = 5.4
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +2
Query: 41 LLPGRKTESLQDSDHIAGLQRRLEE 115
+L G K+ + D+D +AG + +LEE
Sbjct: 246 ILRGGKSGTNFDADSVAGAKAKLEE 270
>SPCC338.07c |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 729
Score = 23.0 bits (47), Expect = 5.4
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -3
Query: 181 KYLENEKLVLGSHEDLMKGVSNFF 110
KYLE K++LG ++ + F+
Sbjct: 698 KYLEQAKVILGQNDPTVISTEKFY 721
>SPAC18G6.05c |||translation elongation regulator Gcn1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2670
Score = 22.6 bits (46), Expect = 7.2
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = -3
Query: 121 SNFFQPALKSSDVVGVLKRFSFPSRE*SLRLMKSV*AAV 5
SNF + +S V+GV FSF SRE S R +K + +A+
Sbjct: 587 SNFVERWFQS--VIGV---FSFASRENSNRALKILKSAI 620
>SPAC869.02c |||nitric oxide dioxygenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 22.6 bits (46), Expect = 7.2
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 124 VSNFFQPALKSSDVVGV 74
VSNF LK D+VGV
Sbjct: 259 VSNFVHDNLKVGDIVGV 275
>SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2493
Score = 22.6 bits (46), Expect = 7.2
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -3
Query: 178 YLENEKLVLGSHEDLMKGVSN 116
+LEN K ++ D+++GVSN
Sbjct: 1867 FLENSKKLIRFTFDVLRGVSN 1887
>SPAPB1E7.02c |mcl1|slr3|DNA polymerase alpha accessory factor
Mcl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 22.6 bits (46), Expect = 7.2
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 12 AHTDFINRNDYSLDGKLNL 68
AHTD + R Y+ DGK L
Sbjct: 11 AHTDGLTRLAYTRDGKFLL 29
>SPAC3H8.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1073
Score = 22.2 bits (45), Expect = 9.5
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -3
Query: 136 LMKGVSNFFQPALKSSDVVGVLKRFSFPSRE*SLRLMKS 20
L+ S+ +LK S + + +RF+ P+R S+ L+ S
Sbjct: 27 LLGSFSSVASVSLKRSGDLLLFERFTLPARTRSVALLSS 65
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 22.2 bits (45), Expect = 9.5
Identities = 10/38 (26%), Positives = 22/38 (57%)
Frame = -2
Query: 143 RGLNERRIELLPTGVEVQRCGRSLEEIQFSVQGVIVTI 30
RGL E+ I +L +G+E + SL + ++ + +++
Sbjct: 64 RGLREQAILILKSGLETLKDSESLCILNANIAAIYLSM 101
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 861,053
Number of Sequences: 5004
Number of extensions: 13867
Number of successful extensions: 56
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 2,362,478
effective HSP length: 54
effective length of database: 2,092,262
effective search space used: 41845240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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