Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_A20
(275 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78016-5|CAB01442.2| 479|Caenorhabditis elegans Hypothetical pr... 29 0.62
Z68010-3|CAA92011.1| 558|Caenorhabditis elegans Hypothetical pr... 29 0.62
Z67756-4|CAA91765.1| 558|Caenorhabditis elegans Hypothetical pr... 29 0.62
Z54327-13|CAE48494.1| 619|Caenorhabditis elegans Hypothetical p... 29 0.62
Z54307-9|CAE48498.1| 619|Caenorhabditis elegans Hypothetical pr... 29 0.62
AF005246-1|AAB95119.1| 556|Caenorhabditis elegans voltage-depen... 29 0.62
U58760-3|AAL02443.1| 53|Caenorhabditis elegans Ribosomal prote... 27 1.4
U58760-2|AAK31460.1| 130|Caenorhabditis elegans Ribosomal prote... 27 1.4
U40798-6|AAA81476.1| 1003|Caenorhabditis elegans Temporarily ass... 26 4.4
AC025716-14|AAK39603.1| 227|Caenorhabditis elegans Hypothetical... 26 4.4
AC024753-9|AAF60460.1| 139|Caenorhabditis elegans Hypothetical ... 26 4.4
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 25 5.8
Z69384-8|CAM06585.1| 495|Caenorhabditis elegans Hypothetical pr... 25 5.8
Z69384-7|CAA93417.2| 502|Caenorhabditis elegans Hypothetical pr... 25 5.8
Z48245-2|CAA88291.1| 309|Caenorhabditis elegans Hypothetical pr... 25 5.8
Z37139-10|CAA85495.1| 309|Caenorhabditis elegans Hypothetical p... 25 5.8
U95074-2|AAB94648.1| 309|Caenorhabditis elegans cyclophilin iso... 25 5.8
U36581-1|AAC47131.1| 309|Caenorhabditis elegans cyclophilin iso... 25 5.8
U76402-1|AAB39734.1| 777|Caenorhabditis elegans degenerin protein. 25 7.7
U40798-3|AAA81473.2| 777|Caenorhabditis elegans Uncoordinated p... 25 7.7
AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t pr... 25 7.7
AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t pr... 25 7.7
AF026202-3|AAB71244.1| 156|Caenorhabditis elegans Hypothetical ... 25 7.7
>Z78016-5|CAB01442.2| 479|Caenorhabditis elegans Hypothetical
protein R186.5 protein.
Length = 479
Score = 28.7 bits (61), Expect = 0.62
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 257 ILSRVCAVNGKFKANLPLGTFAANFATFYS 168
++ +CA+ G LP+ +NFA FYS
Sbjct: 391 LIGSICALAGVLTIALPVPVIVSNFAMFYS 420
>Z68010-3|CAA92011.1| 558|Caenorhabditis elegans Hypothetical
protein R07A4.1 protein.
Length = 558
Score = 28.7 bits (61), Expect = 0.62
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 257 ILSRVCAVNGKFKANLPLGTFAANFATFYS 168
++ +CAV G LP+ +NFA FYS
Sbjct: 421 LVGSLCAVMGVLTIALPVPVIVSNFAMFYS 450
>Z67756-4|CAA91765.1| 558|Caenorhabditis elegans Hypothetical
protein R07A4.1 protein.
Length = 558
Score = 28.7 bits (61), Expect = 0.62
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 257 ILSRVCAVNGKFKANLPLGTFAANFATFYS 168
++ +CAV G LP+ +NFA FYS
Sbjct: 421 LVGSLCAVMGVLTIALPVPVIVSNFAMFYS 450
>Z54327-13|CAE48494.1| 619|Caenorhabditis elegans Hypothetical
protein F14F11.1h protein.
Length = 619
Score = 28.7 bits (61), Expect = 0.62
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 257 ILSRVCAVNGKFKANLPLGTFAANFATFYS 168
++ VCA+ G LP+ +NFA FYS
Sbjct: 489 LVGSVCALMGVLTIALPVPVIVSNFAMFYS 518
>Z54307-9|CAE48498.1| 619|Caenorhabditis elegans Hypothetical
protein F14F11.1h protein.
Length = 619
Score = 28.7 bits (61), Expect = 0.62
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 257 ILSRVCAVNGKFKANLPLGTFAANFATFYS 168
++ VCA+ G LP+ +NFA FYS
Sbjct: 489 LVGSVCALMGVLTIALPVPVIVSNFAMFYS 518
>AF005246-1|AAB95119.1| 556|Caenorhabditis elegans
voltage-dependent potassium channelalpha subunit
protein.
Length = 556
Score = 28.7 bits (61), Expect = 0.62
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 257 ILSRVCAVNGKFKANLPLGTFAANFATFYS 168
++ +CAV G LP+ +NFA FYS
Sbjct: 419 LVGSLCAVMGVLTIALPVPVIVSNFAMFYS 448
>U58760-3|AAL02443.1| 53|Caenorhabditis elegans Ribosomal protein,
large subunitprotein 22, isoform b protein.
Length = 53
Score = 27.5 bits (58), Expect = 1.4
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 213 ISLKFTIDCTHPAEDSILDV 272
+ LKF ++C +P ED IL +
Sbjct: 19 VHLKFNVECKNPVEDGILRI 38
>U58760-2|AAK31460.1| 130|Caenorhabditis elegans Ribosomal protein,
large subunitprotein 22, isoform a protein.
Length = 130
Score = 27.5 bits (58), Expect = 1.4
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 213 ISLKFTIDCTHPAEDSILDV 272
+ LKF ++C +P ED IL +
Sbjct: 19 VHLKFNVECKNPVEDGILRI 38
>U40798-6|AAA81476.1| 1003|Caenorhabditis elegans Temporarily
assigned gene nameprotein 158 protein.
Length = 1003
Score = 25.8 bits (54), Expect = 4.4
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -1
Query: 221 KANLPLGTFAANFATFYSFLTSLLV*LAFLCDGLLCNCHLGNRH 90
+A++P GT AAN T + + + LAF+ G + N L +++
Sbjct: 357 QASIPAGTIAANLTTSFVYFS-----LAFIFGGAIDNAVLRDKN 395
>AC025716-14|AAK39603.1| 227|Caenorhabditis elegans Hypothetical
protein Y39G10AR.16 protein.
Length = 227
Score = 25.8 bits (54), Expect = 4.4
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +2
Query: 65 GCRNRHEARVCCQDGSYKEARRKERPVTPEDW*ERSKRWQNSRQR 199
GC H R + G K AR K + D + SKR QNS+++
Sbjct: 31 GCTTGH--RENSRGGKGKSARSKRSKRSKRDKKQNSKRQQNSKRQ 73
>AC024753-9|AAF60460.1| 139|Caenorhabditis elegans Hypothetical
protein Y23H5B.2 protein.
Length = 139
Score = 25.8 bits (54), Expect = 4.4
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +2
Query: 65 GCRNRHEARVCCQDGSYKEARRKERPVTPEDW*ERSKRWQNSRQR 199
GC H R + G K AR K + D + SKR QNS+++
Sbjct: 31 GCTTGH--RENSRGGKGKSARSKRSKRSKRDKKQNSKRQQNSKRQ 73
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 25.4 bits (53), Expect = 5.8
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1
Query: 34 VAAL*TSGSPGLQESARGTCLLPRWQLQRSPSQRKASYTRR 156
VAA SGSP + S + P + +RSPSQ K+ +R
Sbjct: 293 VAARAKSGSPRRRRSPSASKSPPPARRRRSPSQSKSPAPKR 333
>Z69384-8|CAM06585.1| 495|Caenorhabditis elegans Hypothetical
protein T11G6.2b protein.
Length = 495
Score = 25.4 bits (53), Expect = 5.8
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -2
Query: 151 WCNWPFFATGFFVTAILATDTCLVPI 74
W W GF V IL T CLVP+
Sbjct: 427 WFGWDAVFYGFIVM-ILCTALCLVPV 451
>Z69384-7|CAA93417.2| 502|Caenorhabditis elegans Hypothetical
protein T11G6.2a protein.
Length = 502
Score = 25.4 bits (53), Expect = 5.8
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -2
Query: 151 WCNWPFFATGFFVTAILATDTCLVPI 74
W W GF V IL T CLVP+
Sbjct: 434 WFGWDAVFYGFIVM-ILCTALCLVPV 458
>Z48245-2|CAA88291.1| 309|Caenorhabditis elegans Hypothetical
protein T27D1.1 protein.
Length = 309
Score = 25.4 bits (53), Expect = 5.8
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +2
Query: 128 RKERPVTPEDW*ERS-KRWQNSRQRCQEED 214
R+ER TPE W + +W + + EED
Sbjct: 278 RRERSATPEHWRRNAPTKWVHDSHKHPEED 307
>Z37139-10|CAA85495.1| 309|Caenorhabditis elegans Hypothetical
protein T27D1.1 protein.
Length = 309
Score = 25.4 bits (53), Expect = 5.8
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +2
Query: 128 RKERPVTPEDW*ERS-KRWQNSRQRCQEED 214
R+ER TPE W + +W + + EED
Sbjct: 278 RRERSATPEHWRRNAPTKWVHDSHKHPEED 307
>U95074-2|AAB94648.1| 309|Caenorhabditis elegans cyclophilin
isoform 9 protein.
Length = 309
Score = 25.4 bits (53), Expect = 5.8
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +2
Query: 128 RKERPVTPEDW*ERS-KRWQNSRQRCQEED 214
R+ER TPE W + +W + + EED
Sbjct: 278 RRERSATPEHWRRNAPTKWVHDSHKHPEED 307
>U36581-1|AAC47131.1| 309|Caenorhabditis elegans cyclophilin
isoform 9 protein.
Length = 309
Score = 25.4 bits (53), Expect = 5.8
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +2
Query: 128 RKERPVTPEDW*ERS-KRWQNSRQRCQEED 214
R+ER TPE W + +W + + EED
Sbjct: 278 RRERSATPEHWRRNAPTKWVHDSHKHPEED 307
>U76402-1|AAB39734.1| 777|Caenorhabditis elegans degenerin protein.
Length = 777
Score = 25.0 bits (52), Expect = 7.7
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 259 LSSAGCVQSMVNLRLIFLLAPLPR 188
L AG + + LIFL+A LPR
Sbjct: 383 LKDAGAITTQTKENLIFLVAALPR 406
>U40798-3|AAA81473.2| 777|Caenorhabditis elegans Uncoordinated
protein 8 protein.
Length = 777
Score = 25.0 bits (52), Expect = 7.7
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 259 LSSAGCVQSMVNLRLIFLLAPLPR 188
L AG + + LIFL+A LPR
Sbjct: 383 LKDAGAITTQTKENLIFLVAALPR 406
>AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t
protein 4, isoform b protein.
Length = 308
Score = 25.0 bits (52), Expect = 7.7
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2
Query: 71 RNRHEARVCCQDGSYKEARRKERPVTPEDW*ERSKRWQNSRQRCQEED 214
+ RHE + Y++ARR ER E+ E+ K Q R+ +E++
Sbjct: 55 KRRHENDEQAKLEDYEKARRSEREKEEEEL-EKLKEKQAQRKLAREQE 101
>AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t
protein 4, isoform a protein.
Length = 347
Score = 25.0 bits (52), Expect = 7.7
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2
Query: 71 RNRHEARVCCQDGSYKEARRKERPVTPEDW*ERSKRWQNSRQRCQEED 214
+ RHE + Y++ARR ER E+ E+ K Q R+ +E++
Sbjct: 55 KRRHENDEQAKLEDYEKARRSEREKEEEEL-EKLKEKQAQRKLAREQE 101
>AF026202-3|AAB71244.1| 156|Caenorhabditis elegans Hypothetical
protein C10E2.4 protein.
Length = 156
Score = 25.0 bits (52), Expect = 7.7
Identities = 13/58 (22%), Positives = 23/58 (39%)
Frame = +2
Query: 38 RRSKLVDPPGCRNRHEARVCCQDGSYKEARRKERPVTPEDW*ERSKRWQNSRQRCQEE 211
R S + P C++ ++ + R+ R E W ++WQN + R E
Sbjct: 19 RTSVIHTAPACQSVLDSEGDTESTRPTPTPRRSRNSAEEQWLAHGEKWQNEQLRLSME 76
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,087,133
Number of Sequences: 27780
Number of extensions: 136174
Number of successful extensions: 393
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 393
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 238114316
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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