Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_A17
         (184 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_5727| Best HMM Match : Peptidase_M1 (HMM E-Value=0)                 27   1.8  
SB_33651| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   7.4  

>SB_5727| Best HMM Match : Peptidase_M1 (HMM E-Value=0)
          Length = 904

 Score = 27.5 bits (58), Expect = 1.8
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -3

Query: 101 FNNLWILDITSKHKALPSNYQLLL 30
           FN  W++  T K KA+PS  ++L+
Sbjct: 686 FNYQWVIPFTYKTKAMPSEKKMLI 709


>SB_33651| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 204

 Score = 25.4 bits (53), Expect = 7.4
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 76  ISRIHKLLKKLDRIYNRKQIKLKLVSNN 159
           ISRIHK  K+L RI+   Q   ++  N+
Sbjct: 107 ISRIHKSSKELTRIHKNSQELTRIHKNS 134


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,004,709
Number of Sequences: 59808
Number of extensions: 45661
Number of successful extensions: 93
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 93
length of database: 16,821,457
effective HSP length: 39
effective length of database: 14,488,945
effective search space used: 304267845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)